| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
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The map label for this gene is 116327184
Identifier: 116327184
GI number: 116327184
Start: 424801
End: 425757
Strand: Reverse
Name: 116327184
Synonym: LBL_0363
Alternate gene names: NA
Gene position: 425757-424801 (Counterclockwise)
Preceding gene: 116327185
Following gene: 116327180
Centisome position: 11.78
GC content: 40.13
Gene sequence:
>957_bases ATGAAACCTACGAACATGAAATTGGCTGTGATCATATTTTTTGCGGCCGTATTTGTAAGCTGCACACGTTATGTTGTCAT TACAGAACAGAAATTCACGTCACAAACCGCGAACATAGGACCGAATGTATTTTTAACCACCTTTTCCTATGAAAATTCCC CTTATCCTCCGGTCCTTCTCGTAGACCCGGTTTTTATCAACAAAAAGGTTTTGTATCTAGGAGATAAATCGGGATTAATC GGAGTTTTAAACGGAAACGGCTTTTCAGTTTGGCTGTTGCATTTCGAAGATTACAAATCTTTAAATCTCAAGGAAGCGGG GGAAAATCTCATTCCGGATGTTATCGCAAGAATTCAAAAAGTCACCGGTCAAAAGGAATATATTCTTGGCGGTGTTTCTT TGGGAGGACAAGCAATACTACATTCCTTCAAAGCCAAAAAGATACCGGATATTTCTAAAGCGTTTTTTCTCGGGACCGGG ATGGACTATAAATACAACGATAGTTTTATCGAACAAATGAAGGCTGAAAAAAGATTCGGAACAGACTTAAGCGTTTCCTG CAAAAACAAGGATAGTTTCTGTAAACGTTTTATCTCTTTCGACGAAGACGACCCTACGATTCTATTCGTATATCAGAATC TTTTTAACTACTTGCCTACTTTGGAGGAAAACCCGAAGGCTTGGGAACCGTTTGAGTCTACGAATTTCCCTTCCCTATTC ATCGGAGGAAGAATCGACAATGTATCTCCGACGGAAAGTATTCATCCGACTTATAAAAGAAAAAAAGGGAAAAAAGAGTA TTGGGAAGTGGGAAGGGATAATGGGACGTCGATCGACTACGATCATTTGGGACTTTTCGCCTACAAAGACGCTCCTTCCG ACATTTATCAAAGAATAGCCGATTGGTTGAAAGAAAAAGAAATCGCTAAGACCACTTCCAGCCCAGCAGATCCATAA
Upstream 100 bases:
>100_bases ACATGGATTTGATCGTCGGAAAGAATGCAGATAAGGATGTCTTCATTCCTCTCGTAGTTTGGTTGAATAAAAGAAACTAA TTTCTATTTTGGACTTAAAA
Downstream 100 bases:
>100_bases CCTTCTTGATGTCCTCCCAGACCTCCCGTTTGAGAGGGCTGTTCTCTCCGCCGTTGCGAATCACAAAACTGGGGTGATAC GTAGGCATCACAGGAATTCC
Product: lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 318; Mature: 318
Protein sequence:
>318_residues MKPTNMKLAVIIFFAAVFVSCTRYVVITEQKFTSQTANIGPNVFLTTFSYENSPYPPVLLVDPVFINKKVLYLGDKSGLI GVLNGNGFSVWLLHFEDYKSLNLKEAGENLIPDVIARIQKVTGQKEYILGGVSLGGQAILHSFKAKKIPDISKAFFLGTG MDYKYNDSFIEQMKAEKRFGTDLSVSCKNKDSFCKRFISFDEDDPTILFVYQNLFNYLPTLEENPKAWEPFESTNFPSLF IGGRIDNVSPTESIHPTYKRKKGKKEYWEVGRDNGTSIDYDHLGLFAYKDAPSDIYQRIADWLKEKEIAKTTSSPADP
Sequences:
>Translated_318_residues MKPTNMKLAVIIFFAAVFVSCTRYVVITEQKFTSQTANIGPNVFLTTFSYENSPYPPVLLVDPVFINKKVLYLGDKSGLI GVLNGNGFSVWLLHFEDYKSLNLKEAGENLIPDVIARIQKVTGQKEYILGGVSLGGQAILHSFKAKKIPDISKAFFLGTG MDYKYNDSFIEQMKAEKRFGTDLSVSCKNKDSFCKRFISFDEDDPTILFVYQNLFNYLPTLEENPKAWEPFESTNFPSLF IGGRIDNVSPTESIHPTYKRKKGKKEYWEVGRDNGTSIDYDHLGLFAYKDAPSDIYQRIADWLKEKEIAKTTSSPADP >Mature_318_residues MKPTNMKLAVIIFFAAVFVSCTRYVVITEQKFTSQTANIGPNVFLTTFSYENSPYPPVLLVDPVFINKKVLYLGDKSGLI GVLNGNGFSVWLLHFEDYKSLNLKEAGENLIPDVIARIQKVTGQKEYILGGVSLGGQAILHSFKAKKIPDISKAFFLGTG MDYKYNDSFIEQMKAEKRFGTDLSVSCKNKDSFCKRFISFDEDDPTILFVYQNLFNYLPTLEENPKAWEPFESTNFPSLF IGGRIDNVSPTESIHPTYKRKKGKKEYWEVGRDNGTSIDYDHLGLFAYKDAPSDIYQRIADWLKEKEIAKTTSSPADP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35998; Mature: 35998
Theoretical pI: Translated: 7.49; Mature: 7.49
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPTNMKLAVIIFFAAVFVSCTRYVVITEQKFTSQTANIGPNVFLTTFSYENSPYPPVLL CCCCCCHHHHHHHHHHHHHHHCEEEEEECHHHHCHHCCCCCCEEEEEEECCCCCCCCEEE VDPVFINKKVLYLGDKSGLIGVLNGNGFSVWLLHFEDYKSLNLKEAGENLIPDVIARIQK ECCEEECCEEEEEECCCCEEEEEECCCEEEEEEEECCCCCCCHHHHCCHHHHHHHHHHHH VTGQKEYILGGVSLGGQAILHSFKAKKIPDISKAFFLGTGMDYKYNDSFIEQMKAEKRFG HCCCCEEEEEECCCCHHHHHHHHHHCCCCCCHHHEEEECCCCCCCCHHHHHHHHHHHHCC TDLSVSCKNKDSFCKRFISFDEDDPTILFVYQNLFNYLPTLEENPKAWEPFESTNFPSLF CCEEEEECCHHHHHHHHHCCCCCCCEEEEEHHHHHHHCCCCCCCCCCCCCCCCCCCCEEE IGGRIDNVSPTESIHPTYKRKKGKKEYWEVGRDNGTSIDYDHLGLFAYKDAPSDIYQRIA ECCEECCCCCCCCCCCCHHHHCCCHHHHHCCCCCCCCCCCCCCEEEEECCCCHHHHHHHH DWLKEKEIAKTTSSPADP HHHHHHHHHHHCCCCCCC >Mature Secondary Structure MKPTNMKLAVIIFFAAVFVSCTRYVVITEQKFTSQTANIGPNVFLTTFSYENSPYPPVLL CCCCCCHHHHHHHHHHHHHHHCEEEEEECHHHHCHHCCCCCCEEEEEEECCCCCCCCEEE VDPVFINKKVLYLGDKSGLIGVLNGNGFSVWLLHFEDYKSLNLKEAGENLIPDVIARIQK ECCEEECCEEEEEECCCCEEEEEECCCEEEEEEEECCCCCCCHHHHCCHHHHHHHHHHHH VTGQKEYILGGVSLGGQAILHSFKAKKIPDISKAFFLGTGMDYKYNDSFIEQMKAEKRFG HCCCCEEEEEECCCCHHHHHHHHHHCCCCCCHHHEEEECCCCCCCCHHHHHHHHHHHHCC TDLSVSCKNKDSFCKRFISFDEDDPTILFVYQNLFNYLPTLEENPKAWEPFESTNFPSLF CCEEEEECCHHHHHHHHHCCCCCCCEEEEEHHHHHHHCCCCCCCCCCCCCCCCCCCCEEE IGGRIDNVSPTESIHPTYKRKKGKKEYWEVGRDNGTSIDYDHLGLFAYKDAPSDIYQRIA ECCEECCCCCCCCCCCCHHHHCCCHHHHHCCCCCCCCCCCCCCEEEEECCCCHHHHHHHH DWLKEKEIAKTTSSPADP HHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA