| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
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The map label for this gene is 116327181
Identifier: 116327181
GI number: 116327181
Start: 419408
End: 420715
Strand: Direct
Name: 116327181
Synonym: LBL_0360
Alternate gene names: NA
Gene position: 419408-420715 (Clockwise)
Preceding gene: 116327166
Following gene: 116327182
Centisome position: 11.6
GC content: 48.93
Gene sequence:
>1308_bases ATGATTCTAAAACAAATAGCTGCCATATCACTTTTTTTGTTCTTTTTCTTCGTAAACTGTCAGAAAGAAAAAGAGGACGA ACATTTACCCATCTTCAGTTTAGTTAAATCTTCAAGCACAAATAGCCCTACTACGAGTACACAAACTCCCGGTTCCAATT CCAGAAATGCAGGCGGGGGAGGGGGGCCTCCGGTGACAAATCCGGATCCGGAAACTCCGACGGCAGCCTGCACAACGAAC GTGCGCCAATGGACTCAAAATGAATTACCCGGAACCGGATCGGCGCAAACTTTTACTGGTCTCGGTAACGGAATCGCCGT TGCCAGTGGTGGAGTGAATTCCTGGAACGGGAACGTCGTAACAAAAGTTACTCGTTTCTATAATATCGCAAATGGAGCGA TATGGGCCGGTCCTGACCTGAATATAGCGAAAGAAGAAGCCGCGGCGGTTCCTATCTCTGCTTCTAGAGTTCTGATAACC GGAGGATTCGATTTTACATCCAATGAATTGAATGTCGCTGAAATTATCGATACCGCTGCAAATCCGGTTTTTGATCCAAA CACAGGACAGATCATCAACGACCCGAGACACCTGAATACAAACCCAATGAACACCGCGCGTGCTGTACACACATTGACAG CGCTTGCAGACGGTAGGGTGCTTGCGGTGGGAGGGACGTTTATAAGCGGGGTCGACGCAAAAGCCGAAATCTATAATCCT GCAACCGGACAGTGGACTGAAACAGGTCCGCCTCTCTCGGGAAGAATTTATCATATGGCGACCCTTCTGAACGATGGAAG GGTAATGATTGTCGGTGGAATGGATTCTAACGTAGCAGGAATCAGTGCCACACTCATTTACAATCCGCAGACGAATCAGT GGGTGAACGGTCCGATCTTAAATGAAGGCCGCGGGTCTCATACTGCGACATTACTGCAAGACGGTCGTCTGCTCGTTGCA GGGGGAGATGCCAATAATGGTTGGTTCGCAGGAGCAACATGGGTTAATAGAAATACACTGGAGATCTATGATCCCAATAC AAATCAATGGACAGTATTTACAATGCCGGGACGTCGGACGGAGCACGGTGCCTTTCTGGAAGTGGGTGGTTCTGTCGTGA TGGTCGGTGGACGCAGAGGTGGTGGGGCAATAACTACTTCCACGCTCCGTTATGCACCGAACACCGATACTTGGTGCCAC TTGCCCGATGTGCCTCCCTTGGTTGGAATCACATATCCCCGGATGCTTCTTTTCCCTACAGGAGGAGCGGGTTTCGTCAA TGGAGATTCTAACATATCTTTAAGATGA
Upstream 100 bases:
>100_bases TCGAGTTCGGATTTTTTGATAGAAAGACACCTTTCCTGGCACAATTGAAAATCAAAAATCGTAAGCGAATTGGATACTCT TGAAAAAAAGGATTTTTACT
Downstream 100 bases:
>100_bases GAATTTTTACCGGAAAACTCAATGTTTCGTGCGATAAAAGTTTTCTCTCCGGGGTAATGGTTTTGTAAAAAACGCCTGGA CCTTCCCCAACTCTTTTTAG
Product: lipoprotein
Products: NA
Alternate protein names: Kelch Domain-Containing Protein; Kelch Domain Protein; Kelch Repeat Type 1-Containing Protein; NHL Repeat Containing Protein; Ig Domain-Containing Domain-Containing Protein; Transposase; Kelch Motif-Containing Protein; Ig Domain Domain Protein; Kelch Related Protein; Lipoprotein
Number of amino acids: Translated: 435; Mature: 435
Protein sequence:
>435_residues MILKQIAAISLFLFFFFVNCQKEKEDEHLPIFSLVKSSSTNSPTTSTQTPGSNSRNAGGGGGPPVTNPDPETPTAACTTN VRQWTQNELPGTGSAQTFTGLGNGIAVASGGVNSWNGNVVTKVTRFYNIANGAIWAGPDLNIAKEEAAAVPISASRVLIT GGFDFTSNELNVAEIIDTAANPVFDPNTGQIINDPRHLNTNPMNTARAVHTLTALADGRVLAVGGTFISGVDAKAEIYNP ATGQWTETGPPLSGRIYHMATLLNDGRVMIVGGMDSNVAGISATLIYNPQTNQWVNGPILNEGRGSHTATLLQDGRLLVA GGDANNGWFAGATWVNRNTLEIYDPNTNQWTVFTMPGRRTEHGAFLEVGGSVVMVGGRRGGGAITTSTLRYAPNTDTWCH LPDVPPLVGITYPRMLLFPTGGAGFVNGDSNISLR
Sequences:
>Translated_435_residues MILKQIAAISLFLFFFFVNCQKEKEDEHLPIFSLVKSSSTNSPTTSTQTPGSNSRNAGGGGGPPVTNPDPETPTAACTTN VRQWTQNELPGTGSAQTFTGLGNGIAVASGGVNSWNGNVVTKVTRFYNIANGAIWAGPDLNIAKEEAAAVPISASRVLIT GGFDFTSNELNVAEIIDTAANPVFDPNTGQIINDPRHLNTNPMNTARAVHTLTALADGRVLAVGGTFISGVDAKAEIYNP ATGQWTETGPPLSGRIYHMATLLNDGRVMIVGGMDSNVAGISATLIYNPQTNQWVNGPILNEGRGSHTATLLQDGRLLVA GGDANNGWFAGATWVNRNTLEIYDPNTNQWTVFTMPGRRTEHGAFLEVGGSVVMVGGRRGGGAITTSTLRYAPNTDTWCH LPDVPPLVGITYPRMLLFPTGGAGFVNGDSNISLR >Mature_435_residues MILKQIAAISLFLFFFFVNCQKEKEDEHLPIFSLVKSSSTNSPTTSTQTPGSNSRNAGGGGGPPVTNPDPETPTAACTTN VRQWTQNELPGTGSAQTFTGLGNGIAVASGGVNSWNGNVVTKVTRFYNIANGAIWAGPDLNIAKEEAAAVPISASRVLIT GGFDFTSNELNVAEIIDTAANPVFDPNTGQIINDPRHLNTNPMNTARAVHTLTALADGRVLAVGGTFISGVDAKAEIYNP ATGQWTETGPPLSGRIYHMATLLNDGRVMIVGGMDSNVAGISATLIYNPQTNQWVNGPILNEGRGSHTATLLQDGRLLVA GGDANNGWFAGATWVNRNTLEIYDPNTNQWTVFTMPGRRTEHGAFLEVGGSVVMVGGRRGGGAITTSTLRYAPNTDTWCH LPDVPPLVGITYPRMLLFPTGGAGFVNGDSNISLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI55925604, Length=247, Percent_Identity=27.9352226720648, Blast_Score=82, Evalue=9e-16, Organism=Homo sapiens, GI24475847, Length=216, Percent_Identity=26.8518518518519, Blast_Score=76, Evalue=7e-14, Organism=Homo sapiens, GI51479184, Length=226, Percent_Identity=29.646017699115, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI55741643, Length=235, Percent_Identity=28.936170212766, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI148664209, Length=223, Percent_Identity=30.4932735426009, Blast_Score=69, Evalue=6e-12, Organism=Homo sapiens, GI269973871, Length=231, Percent_Identity=25.974025974026, Blast_Score=68, Evalue=2e-11, Organism=Homo sapiens, GI45643138, Length=231, Percent_Identity=25.974025974026, Blast_Score=68, Evalue=2e-11, Organism=Homo sapiens, GI269973865, Length=231, Percent_Identity=25.974025974026, Blast_Score=68, Evalue=2e-11, Organism=Homo sapiens, GI269973863, Length=231, Percent_Identity=25.974025974026, Blast_Score=68, Evalue=2e-11, Organism=Homo sapiens, GI269973869, Length=231, Percent_Identity=25.974025974026, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI269973867, Length=231, Percent_Identity=25.974025974026, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI14780904, Length=233, Percent_Identity=26.1802575107296, Blast_Score=66, Evalue=6e-11, Organism=Homo sapiens, GI38194229, Length=246, Percent_Identity=29.6747967479675, Blast_Score=66, Evalue=7e-11, Organism=Drosophila melanogaster, GI160714879, Length=232, Percent_Identity=28.448275862069, Blast_Score=71, Evalue=1e-12, Organism=Drosophila melanogaster, GI160714877, Length=232, Percent_Identity=28.448275862069, Blast_Score=71, Evalue=1e-12, Organism=Drosophila melanogaster, GI160715163, Length=232, Percent_Identity=28.448275862069, Blast_Score=70, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45898; Mature: 45898
Theoretical pI: Translated: 5.90; Mature: 5.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILKQIAAISLFLFFFFVNCQKEKEDEHLPIFSLVKSSSTNSPTTSTQTPGSNSRNAGGG CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC GGPPVTNPDPETPTAACTTNVRQWTQNELPGTGSAQTFTGLGNGIAVASGGVNSWNGNVV CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEECCCCCEEEEECCCCCCCCCEE TKVTRFYNIANGAIWAGPDLNIAKEEAAAVPISASRVLITGGFDFTSNELNVAEIIDTAA EEEEEEEEECCCCEEECCCCCEEHHHHCCCCEECCEEEEEECCCCCCCCCCHHHHHHHHC NPVFDPNTGQIINDPRHLNTNPMNTARAVHTLTALADGRVLAVGGTFISGVDAKAEIYNP CCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCEEECCCCCEEECCC ATGQWTETGPPLSGRIYHMATLLNDGRVMIVGGMDSNVAGISATLIYNPQTNQWVNGPIL CCCCCCCCCCCCCCEEEEEEEEECCCEEEEEECCCCCCCCEEEEEEECCCCCCEECCCCC NEGRGSHTATLLQDGRLLVAGGDANNGWFAGATWVNRNTLEIYDPNTNQWTVFTMPGRRT CCCCCCEEEEEEECCEEEEECCCCCCCEEEEEEEECCCEEEEECCCCCCEEEEECCCCCC EHGAFLEVGGSVVMVGGRRGGGAITTSTLRYAPNTDTWCHLPDVPPLVGITYPRMLLFPT CCCEEEEECCEEEEEECCCCCCEEEEEEEEECCCCCCEEECCCCCCCCCCCCCEEEEEEC GGAGFVNGDSNISLR CCCEEECCCCCEEEC >Mature Secondary Structure MILKQIAAISLFLFFFFVNCQKEKEDEHLPIFSLVKSSSTNSPTTSTQTPGSNSRNAGGG CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC GGPPVTNPDPETPTAACTTNVRQWTQNELPGTGSAQTFTGLGNGIAVASGGVNSWNGNVV CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEECCCCCEEEEECCCCCCCCCEE TKVTRFYNIANGAIWAGPDLNIAKEEAAAVPISASRVLITGGFDFTSNELNVAEIIDTAA EEEEEEEEECCCCEEECCCCCEEHHHHCCCCEECCEEEEEECCCCCCCCCCHHHHHHHHC NPVFDPNTGQIINDPRHLNTNPMNTARAVHTLTALADGRVLAVGGTFISGVDAKAEIYNP CCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCEEECCCCCEEECCC ATGQWTETGPPLSGRIYHMATLLNDGRVMIVGGMDSNVAGISATLIYNPQTNQWVNGPIL CCCCCCCCCCCCCCEEEEEEEEECCCEEEEEECCCCCCCCEEEEEEECCCCCCEECCCCC NEGRGSHTATLLQDGRLLVAGGDANNGWFAGATWVNRNTLEIYDPNTNQWTVFTMPGRRT CCCCCCEEEEEEECCEEEEECCCCCCCEEEEEEEECCCEEEEECCCCCCEEEEECCCCCC EHGAFLEVGGSVVMVGGRRGGGAITTSTLRYAPNTDTWCHLPDVPPLVGITYPRMLLFPT CCCEEEEECCEEEEEECCCCCCEEEEEEEEECCCCCCEEECCCCCCCCCCCCCEEEEEEC GGAGFVNGDSNISLR CCCEEECCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA