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The map label for this gene is 116327171

Identifier: 116327171

GI number: 116327171

Start: 411597

End: 412400

Strand: Reverse

Name: 116327171

Synonym: LBL_0350

Alternate gene names: NA

Gene position: 412400-411597 (Counterclockwise)

Preceding gene: 116327172

Following gene: 116327170

Centisome position: 11.41

GC content: 36.69

Gene sequence:

>804_bases
ATGATCTGTAACCCTCAATCTTGTAATGCGGGTAGTGTATTTTTGAAAAAACTTGCTGAATGTTTAAGTATGCAAATGGC
AATGAAAGAAATATTATCCGGAGCAAAGGCCACAGATTATCAAGTATGGTGGGATAGTCTCGATAGCGAATGGAAAAAAT
TTCTCACTGATAGCTGCTATAGGAAAGAAGAACCGGCTGCGGAAGCTTTGGCATTGAAAAGTCTTGGTGGTAATACGGAT
ACCTATATCAAAACGCTTGAACCCTTGCGTTCCATGAAACTTCTCAAGACGTTGAGTCTTTTTGTCCCAAATATAAATGA
CATTTCTCCCTTAATAAACTTAAAGAAACTAAAAGATCTGCGCATACAAAGTACAAATATTTTGGATTTCTCACCTATCG
GTAAACTCGTTAATTTGGAAAAACTTACGATTATTTTCACGAAAAGTATTGAATTAGATCTTTCCTGGTTGGAAAGTCTA
ACCAAATTGGACGACCTACTAATCTATGTCAAGGGTGAAGAAGAACAAATTCGAGTAAAGTCGTTTCACGCGTTACATGC
ACTCAAATCGTTAGTAAGATTAAGCCCTATGAATATCCGCTCAACGACCCGTGAAAAAATATCGATCGAGCCATTGTCAG
CATTAACAAAATTGGAGGAACTCGAGCTTCGTGATTTTTCTCTTAAAAGCCTTGAGCCGCTTTATAAATTAGAATCATTA
AAAATAATTACTCTGTCTGATAGTTCGGTTGATAGGACTGAAGACATTAAAAATGCCATGCCATGGTGCAAGGTGTATTA
TTAA

Upstream 100 bases:

>100_bases
CGATTGCCGACGGTATGAGCGGTAATTTCTGGATTTATCATCCCAATAAAAAAACTCCTTGGGCGAACCGACGATTTACT
ATCTTGAGTCTGATGGCGAA

Downstream 100 bases:

>100_bases
AACAATAAGAACGTATCTTAAAAAACATGAGTTCAGTGTAAGAAAATGAGAAAGAATTTTCTAAAAGCGAGAATTCCTAC
AATTTCAGAATTTGTTCGTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 267; Mature: 267

Protein sequence:

>267_residues
MICNPQSCNAGSVFLKKLAECLSMQMAMKEILSGAKATDYQVWWDSLDSEWKKFLTDSCYRKEEPAAEALALKSLGGNTD
TYIKTLEPLRSMKLLKTLSLFVPNINDISPLINLKKLKDLRIQSTNILDFSPIGKLVNLEKLTIIFTKSIELDLSWLESL
TKLDDLLIYVKGEEEQIRVKSFHALHALKSLVRLSPMNIRSTTREKISIEPLSALTKLEELELRDFSLKSLEPLYKLESL
KIITLSDSSVDRTEDIKNAMPWCKVYY

Sequences:

>Translated_267_residues
MICNPQSCNAGSVFLKKLAECLSMQMAMKEILSGAKATDYQVWWDSLDSEWKKFLTDSCYRKEEPAAEALALKSLGGNTD
TYIKTLEPLRSMKLLKTLSLFVPNINDISPLINLKKLKDLRIQSTNILDFSPIGKLVNLEKLTIIFTKSIELDLSWLESL
TKLDDLLIYVKGEEEQIRVKSFHALHALKSLVRLSPMNIRSTTREKISIEPLSALTKLEELELRDFSLKSLEPLYKLESL
KIITLSDSSVDRTEDIKNAMPWCKVYY
>Mature_267_residues
MICNPQSCNAGSVFLKKLAECLSMQMAMKEILSGAKATDYQVWWDSLDSEWKKFLTDSCYRKEEPAAEALALKSLGGNTD
TYIKTLEPLRSMKLLKTLSLFVPNINDISPLINLKKLKDLRIQSTNILDFSPIGKLVNLEKLTIIFTKSIELDLSWLESL
TKLDDLLIYVKGEEEQIRVKSFHALHALKSLVRLSPMNIRSTTREKISIEPLSALTKLEELELRDFSLKSLEPLYKLESL
KIITLSDSSVDRTEDIKNAMPWCKVYY

Specific function: Unknown

COG id: COG4886

COG function: function code S; Leucine-rich repeat (LRR) protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30484; Mature: 30484

Theoretical pI: Translated: 7.83; Mature: 7.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MICNPQSCNAGSVFLKKLAECLSMQMAMKEILSGAKATDYQVWWDSLDSEWKKFLTDSCY
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
RKEEPAAEALALKSLGGNTDTYIKTLEPLRSMKLLKTLSLFVPNINDISPLINLKKLKDL
CCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
RIQSTNILDFSPIGKLVNLEKLTIIFTKSIELDLSWLESLTKLDDLLIYVKGEEEQIRVK
HCCCCCCCCCCCCHHHHCCEEEEEEEECCCEECHHHHHHHHHHHHEEEEEECCCCHHHHH
SFHALHALKSLVRLSPMNIRSTTREKISIEPLSALTKLEELELRDFSLKSLEPLYKLESL
HHHHHHHHHHHHHCCCCCCCCCCHHHEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCE
KIITLSDSSVDRTEDIKNAMPWCKVYY
EEEEECCCCCCHHHHHHHCCCCEEECC
>Mature Secondary Structure
MICNPQSCNAGSVFLKKLAECLSMQMAMKEILSGAKATDYQVWWDSLDSEWKKFLTDSCY
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
RKEEPAAEALALKSLGGNTDTYIKTLEPLRSMKLLKTLSLFVPNINDISPLINLKKLKDL
CCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
RIQSTNILDFSPIGKLVNLEKLTIIFTKSIELDLSWLESLTKLDDLLIYVKGEEEQIRVK
HCCCCCCCCCCCCHHHHCCEEEEEEEECCCEECHHHHHHHHHHHHEEEEEECCCCHHHHH
SFHALHALKSLVRLSPMNIRSTTREKISIEPLSALTKLEELELRDFSLKSLEPLYKLESL
HHHHHHHHHHHHHCCCCCCCCCCHHHEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCE
KIITLSDSSVDRTEDIKNAMPWCKVYY
EEEEECCCCCCHHHHHHHCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA