| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
Click here to switch to the map view.
The map label for this gene is 116327143
Identifier: 116327143
GI number: 116327143
Start: 376251
End: 377921
Strand: Direct
Name: 116327143
Synonym: LBL_0319
Alternate gene names: NA
Gene position: 376251-377921 (Clockwise)
Preceding gene: 116327138
Following gene: 116327147
Centisome position: 10.41
GC content: 38.84
Gene sequence:
>1671_bases ATGTTCAGAATCTGGTTCGTATTTGTATGTTTTGCTTTTTCTTTATCGTTATTTTCTCAGGATAATTCCAAACTCGGAGA AAAGGAAATTCGATCTTCTCAGAGAGTTCGGTTTATCAATCGATCTTCTGCGAGAGCCGGTGAGGAAGTGCGGGGAACCA ATGAAAAAGTAGGTTCAGGTCTTGCGGACATTCTGAAAAAAGAGCCCGATAAAACTCATACACAAGGTGGAATTAGTATA ACCAGAATTGTTCCCGAGGGAAAGAAATTTGGAGCGGACGTTTTTGCGATTTCGGAAGATTCCGATTACGGACATGTCAA TTCGATTCAAAGAATCCTCGCCGGATTTGTAAAATCTAACTTCGGTTATGACGACAAAAATTCCGAGATTCTCGCCGCTT ATATTTTATATTACAATGCCATTCATAGGAAAGATAAGAGTTATATCGGAAGGAAATATTCCAATTCCGTAATTAAGTTT GTAAACCCGAATTCCATCGGAATTTCCAGACGTTATTCCGAATGGCCTGGAAAAACTCAGATTTTGATTCCTCTTGTCGA AGACGTTCTCGGTCAAGACGTTCATACGGACGAATTGGAAGACGAGGTCAATAAGGAGTTGGATAAGAAGAAGGAAGGGC AGTCTGAAAAGGATAAGTTTGGCGATCTTCAAAACGAAAAAAACAGGAAAGAACTAGAGGAAGTAAAGCGTAGAAAAGAA GAGAACCAGAATAAACAAAAAGAAATTTCCGATAGGGAAGTAAAAACCGATAAGGAACTCCAAGAGCTCAATAAAGATCC GGTAAAAAATAAAACTCAGATCGCAGAAAAGAAAAGGGAAAAAGAACAGATTCAAAAAGAAAAGGAATCCGCTCAGAAAG AAGAGCAAAAGTTAAAGGAAAAGGAAAAAGAAGTCGTTAAAAAAAACGAAGAGAGGAAGAATAATAAGACGGATTCTACT TCTACTTCTTCCAACTCTTCAAATTCCTCTAAATCCGATTCTAAGAGTAATTCGGGCGATAGTAAATCCGGGAGTGATTC CGGTAACAAGAAGTCGGAGGCGGAGTTGAAGAAAGAACTCGCGGAAACTAAAAAGGAATTAGAAATCAAAAAGGAGGAAG AAAAGAAAAAAGAGGAATTCGATAAGAATGTGGTCGGAGGAAAAATTCTTTTCTTAAAAACTCTGAAATACCTGGATAAG GGACATTATAATAACGAGCTCCAGGTTTTAGATCCCACCAAGGACGACACGATTTTTAGAGGGGACTTCAACAAGATTTG CGGTAGGACTTTCGAGATCGTGGATGGAAAGGCTTTGGTCATAGGTTTTGAAGACGGTCACTCTTCCAATCATAAGTTGA TTTTGATCGATCAGGAAACCTTGAAGCCGACTCTTTCGGCGACGGACAATATTTTCTGGAGATCTCCTATGATCGTAAAA GGTGATGAAATCTACGCCTTTGAAGAAGTTGAGGAAAAATATTATCTTTCACGTTTCGGCAAGGATCTAAAAAAACAGGC TAAGTCTTCGGAAGAGATTAGTCCGAATTCGAACGTCACCTTCTATGGTGAAAAAATTTATGTTACCGGTAAGGAAGAAA GTTCCGGTAGTATTCAGATCACCGTTTTTAACAAAGCGGATCTGAAACTGATTAAGAAGATCAAGCCGTAA
Upstream 100 bases:
>100_bases CGGATCGGGAAAAATCCTTGTCTCGATAGAATGCCTGAGAATAACATATTCTCCGATCAAACGAGTCTTTCACTTTGGGA AATAAAAGGAGAATTTTAGA
Downstream 100 bases:
>100_bases GAGGATTTGTCGTAATTCCGAAATTTGAATTTGATTACGAAAACGAGTGTGAATGGGGTTTAATCGAAATCGACAATGTG GAATATAACGTCTCTCGTCC
Product: hypothetical protein
Products: NA
Alternate protein names: P93 Antigen; Borrelia; Signal Peptide
Number of amino acids: Translated: 556; Mature: 556
Protein sequence:
>556_residues MFRIWFVFVCFAFSLSLFSQDNSKLGEKEIRSSQRVRFINRSSARAGEEVRGTNEKVGSGLADILKKEPDKTHTQGGISI TRIVPEGKKFGADVFAISEDSDYGHVNSIQRILAGFVKSNFGYDDKNSEILAAYILYYNAIHRKDKSYIGRKYSNSVIKF VNPNSIGISRRYSEWPGKTQILIPLVEDVLGQDVHTDELEDEVNKELDKKKEGQSEKDKFGDLQNEKNRKELEEVKRRKE ENQNKQKEISDREVKTDKELQELNKDPVKNKTQIAEKKREKEQIQKEKESAQKEEQKLKEKEKEVVKKNEERKNNKTDST STSSNSSNSSKSDSKSNSGDSKSGSDSGNKKSEAELKKELAETKKELEIKKEEEKKKEEFDKNVVGGKILFLKTLKYLDK GHYNNELQVLDPTKDDTIFRGDFNKICGRTFEIVDGKALVIGFEDGHSSNHKLILIDQETLKPTLSATDNIFWRSPMIVK GDEIYAFEEVEEKYYLSRFGKDLKKQAKSSEEISPNSNVTFYGEKIYVTGKEESSGSIQITVFNKADLKLIKKIKP
Sequences:
>Translated_556_residues MFRIWFVFVCFAFSLSLFSQDNSKLGEKEIRSSQRVRFINRSSARAGEEVRGTNEKVGSGLADILKKEPDKTHTQGGISI TRIVPEGKKFGADVFAISEDSDYGHVNSIQRILAGFVKSNFGYDDKNSEILAAYILYYNAIHRKDKSYIGRKYSNSVIKF VNPNSIGISRRYSEWPGKTQILIPLVEDVLGQDVHTDELEDEVNKELDKKKEGQSEKDKFGDLQNEKNRKELEEVKRRKE ENQNKQKEISDREVKTDKELQELNKDPVKNKTQIAEKKREKEQIQKEKESAQKEEQKLKEKEKEVVKKNEERKNNKTDST STSSNSSNSSKSDSKSNSGDSKSGSDSGNKKSEAELKKELAETKKELEIKKEEEKKKEEFDKNVVGGKILFLKTLKYLDK GHYNNELQVLDPTKDDTIFRGDFNKICGRTFEIVDGKALVIGFEDGHSSNHKLILIDQETLKPTLSATDNIFWRSPMIVK GDEIYAFEEVEEKYYLSRFGKDLKKQAKSSEEISPNSNVTFYGEKIYVTGKEESSGSIQITVFNKADLKLIKKIKP >Mature_556_residues MFRIWFVFVCFAFSLSLFSQDNSKLGEKEIRSSQRVRFINRSSARAGEEVRGTNEKVGSGLADILKKEPDKTHTQGGISI TRIVPEGKKFGADVFAISEDSDYGHVNSIQRILAGFVKSNFGYDDKNSEILAAYILYYNAIHRKDKSYIGRKYSNSVIKF VNPNSIGISRRYSEWPGKTQILIPLVEDVLGQDVHTDELEDEVNKELDKKKEGQSEKDKFGDLQNEKNRKELEEVKRRKE ENQNKQKEISDREVKTDKELQELNKDPVKNKTQIAEKKREKEQIQKEKESAQKEEQKLKEKEKEVVKKNEERKNNKTDST STSSNSSNSSKSDSKSNSGDSKSGSDSGNKKSEAELKKELAETKKELEIKKEEEKKKEEFDKNVVGGKILFLKTLKYLDK GHYNNELQVLDPTKDDTIFRGDFNKICGRTFEIVDGKALVIGFEDGHSSNHKLILIDQETLKPTLSATDNIFWRSPMIVK GDEIYAFEEVEEKYYLSRFGKDLKKQAKSSEEISPNSNVTFYGEKIYVTGKEESSGSIQITVFNKADLKLIKKIKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63610; Mature: 63610
Theoretical pI: Translated: 9.18; Mature: 9.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRIWFVFVCFAFSLSLFSQDNSKLGEKEIRSSQRVRFINRSSARAGEEVRGTNEKVGSG CHHHHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHEEHHCCCCCCCCHHHCCCHHHHHCC LADILKKEPDKTHTQGGISITRIVPEGKKFGADVFAISEDSDYGHVNSIQRILAGFVKSN HHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHC FGYDDKNSEILAAYILYYNAIHRKDKSYIGRKYSNSVIKFVNPNSIGISRRYSEWPGKTQ CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHCCCEEEEECCCCCCCCCCHHCCCCCCE ILIPLVEDVLGQDVHTDELEDEVNKELDKKKEGQSEKDKFGDLQNEKNRKELEEVKRRKE EHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCHHHHHHHHHHHHH ENQNKQKEISDREVKTDKELQELNKDPVKNKTQIAEKKREKEQIQKEKESAQKEEQKLKE HCCHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KEKEVVKKNEERKNNKTDSTSTSSNSSNSSKSDSKSNSGDSKSGSDSGNKKSEAELKKEL HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH AETKKELEIKKEEEKKKEEFDKNVVGGKILFLKTLKYLDKGHYNNELQVLDPTKDDTIFR HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCCEEE GDFNKICGRTFEIVDGKALVIGFEDGHSSNHKLILIDQETLKPTLSATDNIFWRSPMIVK CCHHHHCCCEEEEECCCEEEEEECCCCCCCCEEEEEEHHHHCCHHHCCCCEEECCCEEEE GDEIYAFEEVEEKYYLSRFGKDLKKQAKSSEEISPNSNVTFYGEKIYVTGKEESSGSIQI CCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEECCCCCCCEEEE TVFNKADLKLIKKIKP EEECCHHHHHHHHCCC >Mature Secondary Structure MFRIWFVFVCFAFSLSLFSQDNSKLGEKEIRSSQRVRFINRSSARAGEEVRGTNEKVGSG CHHHHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHEEHHCCCCCCCCHHHCCCHHHHHCC LADILKKEPDKTHTQGGISITRIVPEGKKFGADVFAISEDSDYGHVNSIQRILAGFVKSN HHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHC FGYDDKNSEILAAYILYYNAIHRKDKSYIGRKYSNSVIKFVNPNSIGISRRYSEWPGKTQ CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHCCCEEEEECCCCCCCCCCHHCCCCCCE ILIPLVEDVLGQDVHTDELEDEVNKELDKKKEGQSEKDKFGDLQNEKNRKELEEVKRRKE EHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCHHHHHHHHHHHHH ENQNKQKEISDREVKTDKELQELNKDPVKNKTQIAEKKREKEQIQKEKESAQKEEQKLKE HCCHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KEKEVVKKNEERKNNKTDSTSTSSNSSNSSKSDSKSNSGDSKSGSDSGNKKSEAELKKEL HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH AETKKELEIKKEEEKKKEEFDKNVVGGKILFLKTLKYLDKGHYNNELQVLDPTKDDTIFR HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCCEEE GDFNKICGRTFEIVDGKALVIGFEDGHSSNHKLILIDQETLKPTLSATDNIFWRSPMIVK CCHHHHCCCEEEEECCCEEEEEECCCCCCCCEEEEEEHHHHCCHHHCCCCEEECCCEEEE GDEIYAFEEVEEKYYLSRFGKDLKKQAKSSEEISPNSNVTFYGEKIYVTGKEESSGSIQI CCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEECCCCCCCEEEE TVFNKADLKLIKKIKP EEECCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA