| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
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The map label for this gene is 116327131
Identifier: 116327131
GI number: 116327131
Start: 363773
End: 365362
Strand: Direct
Name: 116327131
Synonym: LBL_0307
Alternate gene names: NA
Gene position: 363773-365362 (Clockwise)
Preceding gene: 116327129
Following gene: 116327132
Centisome position: 10.06
GC content: 42.01
Gene sequence:
>1590_bases ATGGAAATTCGTACTCGTATATTGCTATTATTCTCGTTTATAACGTTGGTTTCCTTTCCAAAGGCTCAGGAGAACACGTT CAACCAGAATCAGGTGGAGAATTATAGCGTGGCAAATTCCATCCATGCGGAAATTTTAAAAAAAGATGAGAATTCGATTC GAATTTTCTGGGATGCCCCGAGAGAAACCGGCGAAATCATCGTTGCTCGCGCTTCATCTATGATTGATACTCCCGAAAAA TGTATGATTGCTGATTCGTTGGGTAAGTATCCGAGCGGAATTGCCGGCGGAGTGACCCAGATTTTCGATTATAATCTCAA ACCGGGAACTTATTATTACGCGGTCGTTTTAGCGCATCGTGTTAAAAAGAATATGATCAAATTGATTCCTGGAAAAAACT TCACAACGATTCCTGTCGTCATTGAACACGCTCTTGCGCCGGGAGGGGCGAACGCGGACAATAAAATTCCTGAAATTCCG GATGACGCAAGGGTGATCGATCTGACGGTTAAAAGAGAAGGCAAATATCTTCGATTGAATTGGACTCCGTATGAAAAGGC CATTCCGAACGCGACCGTTTATACTGTTTATCGTTCTTCGGAACCCATGTCTTCCTTATCTTTGATGAGAAAAGCGGAAA AGTTAACCGAATTGAGTCATCCCGAATCCACGTTTTTGGACCAGGATCTGAACAAATCTCGAACGATCTATTACGGTGTC AGTGTGAGGTCCGGTGCAAAAGAAATTTTACCCCTGATAAACGGACAATCCTTCACTCGATTCTTTTATATCGGAAATCC GAATAAGGATGGCTCCGAGAACATTCCATCTTCTGAATATTCGGAAGATGAAATGCATGTAAAAGATATTAAGGCGACCG TTGAAGGCCTTGACGTAAAACTCGAATGGAAGGCTCCTGAAAAGGCGGACGCGAATACGGTTTATACGATATATCAGGCT CTCAAACCCTTGAGTGGCGGAACCGCTACTTTTCTCGGGGGGAGTATCCGTAAATTGGGCGAGATAAATCACCCGGATAC GATCGCGCAAGTTCGGATGAAATCTTTGGATTCGAAAATCTATTTCGGAGTTACGGTAAAACATCAAGATAAGGAAGGAT TCAACCTCGTCGAAAATGAATCCTTTGTTGCGATCAATTCAGATAAGGTTCAGAATCCGGAAGAAGACGAACAGTCGAAA GTAAAAGATAATCAGGAGGAGGATTCGGTAACTAAACAACAGGAAGAAGGTTCGATAGAGAAACAGCCGGAAGAGAATGC TAAAGAAAAACAGGAAGAGGAAGAATTTTCCGGAACCGATGACGAACTCGATAAGATCTTGAAGAGAACCTACTGGAAAA AGGAATATTCGGACGCGATTCACTACTTGAAATCGTATGCTAGAGACGGAAATTCCGTTTACTTAAAAGGGAAAGCTAAA TTTTTCACTGGACTCTCCTACTATAAAAAAGGGAATTATCAAGAAGCCCTTAAGTATTTCATCAATAAAGATAGTAAATT TTATAACACAGAACGCTCGGAATTTTGGTCGAAACGTTGTCTGTCTCGGATCTCCGGAGGAAATCCATGA
Upstream 100 bases:
>100_bases GGTTCTCATATTATTACACGTTTAAAACAGATTTCTCTTCGGATCGGTGTTAAATTACTCAGTTGAGACTGTCGATATAA GTACCAAAGACAATTCTTTT
Downstream 100 bases:
>100_bases ACCGCTCCATCATTTTAATTACTGGATTTTTATTCATTTGCGCCGGTCTTTTAATCGGAGTTTACCAGACCACGGTTCAA GACGAGGATTCCAAACGGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 529; Mature: 529
Protein sequence:
>529_residues MEIRTRILLLFSFITLVSFPKAQENTFNQNQVENYSVANSIHAEILKKDENSIRIFWDAPRETGEIIVARASSMIDTPEK CMIADSLGKYPSGIAGGVTQIFDYNLKPGTYYYAVVLAHRVKKNMIKLIPGKNFTTIPVVIEHALAPGGANADNKIPEIP DDARVIDLTVKREGKYLRLNWTPYEKAIPNATVYTVYRSSEPMSSLSLMRKAEKLTELSHPESTFLDQDLNKSRTIYYGV SVRSGAKEILPLINGQSFTRFFYIGNPNKDGSENIPSSEYSEDEMHVKDIKATVEGLDVKLEWKAPEKADANTVYTIYQA LKPLSGGTATFLGGSIRKLGEINHPDTIAQVRMKSLDSKIYFGVTVKHQDKEGFNLVENESFVAINSDKVQNPEEDEQSK VKDNQEEDSVTKQQEEGSIEKQPEENAKEKQEEEEFSGTDDELDKILKRTYWKKEYSDAIHYLKSYARDGNSVYLKGKAK FFTGLSYYKKGNYQEALKYFINKDSKFYNTERSEFWSKRCLSRISGGNP
Sequences:
>Translated_529_residues MEIRTRILLLFSFITLVSFPKAQENTFNQNQVENYSVANSIHAEILKKDENSIRIFWDAPRETGEIIVARASSMIDTPEK CMIADSLGKYPSGIAGGVTQIFDYNLKPGTYYYAVVLAHRVKKNMIKLIPGKNFTTIPVVIEHALAPGGANADNKIPEIP DDARVIDLTVKREGKYLRLNWTPYEKAIPNATVYTVYRSSEPMSSLSLMRKAEKLTELSHPESTFLDQDLNKSRTIYYGV SVRSGAKEILPLINGQSFTRFFYIGNPNKDGSENIPSSEYSEDEMHVKDIKATVEGLDVKLEWKAPEKADANTVYTIYQA LKPLSGGTATFLGGSIRKLGEINHPDTIAQVRMKSLDSKIYFGVTVKHQDKEGFNLVENESFVAINSDKVQNPEEDEQSK VKDNQEEDSVTKQQEEGSIEKQPEENAKEKQEEEEFSGTDDELDKILKRTYWKKEYSDAIHYLKSYARDGNSVYLKGKAK FFTGLSYYKKGNYQEALKYFINKDSKFYNTERSEFWSKRCLSRISGGNP >Mature_529_residues MEIRTRILLLFSFITLVSFPKAQENTFNQNQVENYSVANSIHAEILKKDENSIRIFWDAPRETGEIIVARASSMIDTPEK CMIADSLGKYPSGIAGGVTQIFDYNLKPGTYYYAVVLAHRVKKNMIKLIPGKNFTTIPVVIEHALAPGGANADNKIPEIP DDARVIDLTVKREGKYLRLNWTPYEKAIPNATVYTVYRSSEPMSSLSLMRKAEKLTELSHPESTFLDQDLNKSRTIYYGV SVRSGAKEILPLINGQSFTRFFYIGNPNKDGSENIPSSEYSEDEMHVKDIKATVEGLDVKLEWKAPEKADANTVYTIYQA LKPLSGGTATFLGGSIRKLGEINHPDTIAQVRMKSLDSKIYFGVTVKHQDKEGFNLVENESFVAINSDKVQNPEEDEQSK VKDNQEEDSVTKQQEEGSIEKQPEENAKEKQEEEEFSGTDDELDKILKRTYWKKEYSDAIHYLKSYARDGNSVYLKGKAK FFTGLSYYKKGNYQEALKYFINKDSKFYNTERSEFWSKRCLSRISGGNP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60068; Mature: 60068
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEIRTRILLLFSFITLVSFPKAQENTFNQNQVENYSVANSIHAEILKKDENSIRIFWDAP CCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHCCCCCEEEEECCC RETGEIIVARASSMIDTPEKCMIADSLGKYPSGIAGGVTQIFDYNLKPGTYYYAVVLAHR CCCCCEEEEECHHHCCCCHHHHHHHHHCCCCCCHHCCHHHHHCCCCCCCCHHHHHHHHHH VKKNMIKLIPGKNFTTIPVVIEHALAPGGANADNKIPEIPDDARVIDLTVKREGKYLRLN HHHHHHEECCCCCCEEHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEE WTPYEKAIPNATVYTVYRSSEPMSSLSLMRKAEKLTELSHPESTFLDQDLNKSRTIYYGV CCCHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCEEEEEE SVRSGAKEILPLINGQSFTRFFYIGNPNKDGSENIPSSEYSEDEMHVKDIKATVEGLDVK EECCCHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEE LEWKAPEKADANTVYTIYQALKPLSGGTATFLGGSIRKLGEINHPDTIAQVRMKSLDSKI EEECCCCCCCCCHHHHHHHHHHCCCCCCCHHHCCHHHHHCCCCCCHHHHHHHHHHCCCEE YFGVTVKHQDKEGFNLVENESFVAINSDKVQNPEEDEQSKVKDNQEEDSVTKQQEEGSIE EEEEEEEECCCCCCCEECCCCEEEECCCCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCC KQPEENAKEKQEEEEFSGTDDELDKILKRTYWKKEYSDAIHYLKSYARDGNSVYLKGKAK CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHH FFTGLSYYKKGNYQEALKYFINKDSKFYNTERSEFWSKRCLSRISGGNP HHHHHHHHHCCCHHHHHHHHHCCCCHHCCCHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MEIRTRILLLFSFITLVSFPKAQENTFNQNQVENYSVANSIHAEILKKDENSIRIFWDAP CCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHCCCCCEEEEECCC RETGEIIVARASSMIDTPEKCMIADSLGKYPSGIAGGVTQIFDYNLKPGTYYYAVVLAHR CCCCCEEEEECHHHCCCCHHHHHHHHHCCCCCCHHCCHHHHHCCCCCCCCHHHHHHHHHH VKKNMIKLIPGKNFTTIPVVIEHALAPGGANADNKIPEIPDDARVIDLTVKREGKYLRLN HHHHHHEECCCCCCEEHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEE WTPYEKAIPNATVYTVYRSSEPMSSLSLMRKAEKLTELSHPESTFLDQDLNKSRTIYYGV CCCHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCEEEEEE SVRSGAKEILPLINGQSFTRFFYIGNPNKDGSENIPSSEYSEDEMHVKDIKATVEGLDVK EECCCHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEE LEWKAPEKADANTVYTIYQALKPLSGGTATFLGGSIRKLGEINHPDTIAQVRMKSLDSKI EEECCCCCCCCCHHHHHHHHHHCCCCCCCHHHCCHHHHHCCCCCCHHHHHHHHHHCCCEE YFGVTVKHQDKEGFNLVENESFVAINSDKVQNPEEDEQSKVKDNQEEDSVTKQQEEGSIE EEEEEEEECCCCCCCEECCCCEEEECCCCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCC KQPEENAKEKQEEEEFSGTDDELDKILKRTYWKKEYSDAIHYLKSYARDGNSVYLKGKAK CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHH FFTGLSYYKKGNYQEALKYFINKDSKFYNTERSEFWSKRCLSRISGGNP HHHHHHHHHCCCHHHHHHHHHCCCCHHCCCHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA