| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
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The map label for this gene is 116327109
Identifier: 116327109
GI number: 116327109
Start: 335526
End: 336368
Strand: Reverse
Name: 116327109
Synonym: LBL_0284
Alternate gene names: NA
Gene position: 336368-335526 (Counterclockwise)
Preceding gene: 116327110
Following gene: 116327108
Centisome position: 9.31
GC content: 37.72
Gene sequence:
>843_bases ATGAATCTCCGATCTAATTTTTTTTCAGTAATAATTTTAAGTATTTTATCGAGTTTTGTCGCGACTCTTTTCTCAAAAAG AAAACCTGCATCCGCGACGAATCTCGTTGATTTTTCGAAAAAAAAATCCATATCTTTGGTTGCGCAGTTACTTCTTTTTT TTCTGATCGTTTCATTTGTCGCGTGTATTAAAGAGCCGATCCCTGCAAATGTTCCCGCGGGAGCAAAGTTTCAAAAAGAA TTCAACACATACGTCCTTTCCGAATCTGGAAGGAGAAGAGTCTATTACGATAATGGAAAAATTTATCAAGACTGTTCTAT AGGCGAACTCGGTCAGGAGAACGGTCTCTGTAAATATTATTCCAAATACGACGGTCGTGTATTAGCACAAGGTAATTTTG AAAACGGGGTTCGCAGAGGAGAATGGATCTGGAACTTCGATAGCGGCAATATTTATATCCGCCAAAATTTCGGAAAAAGT TCCCGCAAACCCGAAGTAATGATGAATGGAGACGAAGGAAACGAAGAAGGCCTCTATGAAAGGTTTTACGAGAACGGTCA AATTGAACTCAAAGGAAATTACACCGAAGGTTATAAAAACGGTCTTTGGCAGAAATATTTTCAAGACGGCGAATTGGAAT ACACCGGTTATTATAAAAACGGACTTAAGGTAAGGACCTGGTTTTATTATTATCCAACTCATAAAACGGAAGCAATTGAG GTTTTCGATGACAACGGCGGTTTTATTTCCAGAACGACGTATCTTCCTGATGGAACAATCAACTGCAAAATCAAAAAAGG TTTCGATTCAGTTTGCCAATCCTTAACACATTTTAAAAAATAA
Upstream 100 bases:
>100_bases GAAGTGGAAATTCGAGACGAAGACGGAGAATTACTCGTAAATAAAAAGTTTACTATCGATTGAATTCGAACGACGACCGA AATAATATTATAAAAATAGA
Downstream 100 bases:
>100_bases AAATCGTGAAAACGATCTGCGGAATTTTTTTCCTTCTCGTAATCTATCTCAGTTTCTACTTTTCGCTGACCACCTTCAAT CTTTGGATTTTGCTTTCGGC
Product: lipoprotein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 280; Mature: 280
Protein sequence:
>280_residues MNLRSNFFSVIILSILSSFVATLFSKRKPASATNLVDFSKKKSISLVAQLLLFFLIVSFVACIKEPIPANVPAGAKFQKE FNTYVLSESGRRRVYYDNGKIYQDCSIGELGQENGLCKYYSKYDGRVLAQGNFENGVRRGEWIWNFDSGNIYIRQNFGKS SRKPEVMMNGDEGNEEGLYERFYENGQIELKGNYTEGYKNGLWQKYFQDGELEYTGYYKNGLKVRTWFYYYPTHKTEAIE VFDDNGGFISRTTYLPDGTINCKIKKGFDSVCQSLTHFKK
Sequences:
>Translated_280_residues MNLRSNFFSVIILSILSSFVATLFSKRKPASATNLVDFSKKKSISLVAQLLLFFLIVSFVACIKEPIPANVPAGAKFQKE FNTYVLSESGRRRVYYDNGKIYQDCSIGELGQENGLCKYYSKYDGRVLAQGNFENGVRRGEWIWNFDSGNIYIRQNFGKS SRKPEVMMNGDEGNEEGLYERFYENGQIELKGNYTEGYKNGLWQKYFQDGELEYTGYYKNGLKVRTWFYYYPTHKTEAIE VFDDNGGFISRTTYLPDGTINCKIKKGFDSVCQSLTHFKK >Mature_280_residues MNLRSNFFSVIILSILSSFVATLFSKRKPASATNLVDFSKKKSISLVAQLLLFFLIVSFVACIKEPIPANVPAGAKFQKE FNTYVLSESGRRRVYYDNGKIYQDCSIGELGQENGLCKYYSKYDGRVLAQGNFENGVRRGEWIWNFDSGNIYIRQNFGKS SRKPEVMMNGDEGNEEGLYERFYENGQIELKGNYTEGYKNGLWQKYFQDGELEYTGYYKNGLKVRTWFYYYPTHKTEAIE VFDDNGGFISRTTYLPDGTINCKIKKGFDSVCQSLTHFKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32246; Mature: 32246
Theoretical pI: Translated: 9.09; Mature: 9.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLRSNFFSVIILSILSSFVATLFSKRKPASATNLVDFSKKKSISLVAQLLLFFLIVSFV CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH ACIKEPIPANVPAGAKFQKEFNTYVLSESGRRRVYYDNGKIYQDCSIGELGQENGLCKYY HHHCCCCCCCCCCCCHHHHHHCEEEECCCCCEEEEECCCCEEECCCCCCCCCCCCEEEEE SKYDGRVLAQGNFENGVRRGEWIWNFDSGNIYIRQNFGKSSRKPEVMMNGDEGNEEGLYE CCCCCEEEEECCCCCCCCCCCEEEEECCCCEEEEECCCCCCCCCCEEECCCCCCCCHHHH RFYENGQIELKGNYTEGYKNGLWQKYFQDGELEYTGYYKNGLKVRTWFYYYPTHKTEAIE HHHCCCEEEEECCCCCHHHCCHHHHHHCCCCEEEEEEECCCEEEEEEEEEECCCCCEEEE VFDDNGGFISRTTYLPDGTINCKIKKGFDSVCQSLTHFKK EEECCCCEEEEEEECCCCEEEEEEECCHHHHHHHHHHHCC >Mature Secondary Structure MNLRSNFFSVIILSILSSFVATLFSKRKPASATNLVDFSKKKSISLVAQLLLFFLIVSFV CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH ACIKEPIPANVPAGAKFQKEFNTYVLSESGRRRVYYDNGKIYQDCSIGELGQENGLCKYY HHHCCCCCCCCCCCCHHHHHHCEEEECCCCCEEEEECCCCEEECCCCCCCCCCCCEEEEE SKYDGRVLAQGNFENGVRRGEWIWNFDSGNIYIRQNFGKSSRKPEVMMNGDEGNEEGLYE CCCCCEEEEECCCCCCCCCCCEEEEECCCCEEEEECCCCCCCCCCEEECCCCCCCCHHHH RFYENGQIELKGNYTEGYKNGLWQKYFQDGELEYTGYYKNGLKVRTWFYYYPTHKTEAIE HHHCCCEEEEECCCCCHHHCCHHHHHHCCCCEEEEEEECCCEEEEEEEEEECCCCCEEEE VFDDNGGFISRTTYLPDGTINCKIKKGFDSVCQSLTHFKK EEECCCCEEEEEEECCCCEEEEEEECCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA