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The map label for this gene is 116327100

Identifier: 116327100

GI number: 116327100

Start: 325432

End: 326271

Strand: Direct

Name: 116327100

Synonym: LBL_0275

Alternate gene names: NA

Gene position: 325432-326271 (Clockwise)

Preceding gene: 116327099

Following gene: 116327101

Centisome position: 9.0

GC content: 37.38

Gene sequence:

>840_bases
TTGGTTTTTAAAAATTCCCTAATTACAGGGGTTGTATTTTATTTATTCACTACTTCTCTTTTTCCTTACGACCCTGCCGC
TCGGTTTGATAAAAATGAAAAGCCGAAAGAATTGGAAGGAGTGGGAATTCAAGAGAAATTGGGAAATCAGCTCGATCTTT
CTCTTTCTTTTCATGATGAAACCGGAAGAAAAGTTTTTTTAAGTTCTTTTTTTAAAAAAGATAAACCCGTTCTTCTTTCT
CTTGTTTATTACAAATGTCCGACATTGTGCAATTTCCATCTCAATGGAATTACGGATGTGCTCAAAAAGCTAAATTGGGA
AGTCGGAAAAGAATTTGAATACGTCGTTGTTTCCTTTGATCCCCAAGAGACTTTCGAACTTGCGCATGCTAAGAAAAGCG
CCTATCTCAAAGAATATTCTCGCGGTGACGGACAAGGGTGGCACTTTCTTACGGGAAATCAGGAAGAGATCACTGCACTT
GCCGATTCCGTAGGATTTTCCTATAAGTGGAATTCGGAAAATGAACAATGGATTCATTCTTCCGTCGCTTATGTGATTAC
ACCTTCCGGAAAAATTTCCCGTTATCTTCATGGTATTACTTTTGATGAAAGAACCTTGAAACTTTCTCTATTAGAAGCGT
CCGACGGTAAAATAGGGGATTTCACCGATCAATTTGCCCTTTTTTGCTTTCAATTTGATCCAGGCAAAAATACATATACT
TTGTACGCTTATAATATTATGAAATTGGGTGGATTCTTCACTCTTTTTATTATGGCGGTGTTCTTGATCCCATTCTGGAT
CAGGTATAACAGAAATTCCGAACTCATTAGGAAGGAGTAA

Upstream 100 bases:

>100_bases
ATCTCTCTTTTTTGCATCCGGGGGTAAAAGAACATTCCCTACATCTTCCTACGAACACTCAGGCAAAATAATATCTGGGA
AATATCCCCGGAGCTAAACT

Downstream 100 bases:

>100_bases
CTTCAAGAAAATGACCTGGTTGAACCTTATTACGGCAACAAGTTTTATGCCGGTTCAGGCTTCGGAAGTAGCAAAGAATG
TAGATAACCTCTATCTCTTT

Product: SCO1/SenC/PrrC family protein

Products: NA

Alternate protein names: SCO1/SenC Family Protein; SCO1/SenC/PrrC Family Protein; SenC/PrrC; Cytochrome C Oxidase Synthesis Factor; Respiratory System Biogenesis Protein; SenC/PrrC-Like

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MVFKNSLITGVVFYLFTTSLFPYDPAARFDKNEKPKELEGVGIQEKLGNQLDLSLSFHDETGRKVFLSSFFKKDKPVLLS
LVYYKCPTLCNFHLNGITDVLKKLNWEVGKEFEYVVVSFDPQETFELAHAKKSAYLKEYSRGDGQGWHFLTGNQEEITAL
ADSVGFSYKWNSENEQWIHSSVAYVITPSGKISRYLHGITFDERTLKLSLLEASDGKIGDFTDQFALFCFQFDPGKNTYT
LYAYNIMKLGGFFTLFIMAVFLIPFWIRYNRNSELIRKE

Sequences:

>Translated_279_residues
MVFKNSLITGVVFYLFTTSLFPYDPAARFDKNEKPKELEGVGIQEKLGNQLDLSLSFHDETGRKVFLSSFFKKDKPVLLS
LVYYKCPTLCNFHLNGITDVLKKLNWEVGKEFEYVVVSFDPQETFELAHAKKSAYLKEYSRGDGQGWHFLTGNQEEITAL
ADSVGFSYKWNSENEQWIHSSVAYVITPSGKISRYLHGITFDERTLKLSLLEASDGKIGDFTDQFALFCFQFDPGKNTYT
LYAYNIMKLGGFFTLFIMAVFLIPFWIRYNRNSELIRKE
>Mature_279_residues
MVFKNSLITGVVFYLFTTSLFPYDPAARFDKNEKPKELEGVGIQEKLGNQLDLSLSFHDETGRKVFLSSFFKKDKPVLLS
LVYYKCPTLCNFHLNGITDVLKKLNWEVGKEFEYVVVSFDPQETFELAHAKKSAYLKEYSRGDGQGWHFLTGNQEEITAL
ADSVGFSYKWNSENEQWIHSSVAYVITPSGKISRYLHGITFDERTLKLSLLEASDGKIGDFTDQFALFCFQFDPGKNTYT
LYAYNIMKLGGFFTLFIMAVFLIPFWIRYNRNSELIRKE

Specific function: Unknown

COG id: COG1999

COG function: function code R; Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32205; Mature: 32205

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVFKNSLITGVVFYLFTTSLFPYDPAARFDKNEKPKELEGVGIQEKLGNQLDLSLSFHDE
CCCCHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCHHHCCCCHHHCCCEEEEEEEECCC
TGRKVFLSSFFKKDKPVLLSLVYYKCPTLCNFHLNGITDVLKKLNWEVGKEFEYVVVSFD
CCHHHHHHHHHCCCCCCEEHHHHHCCCCEEEEECCCHHHHHHHCCCCCCCCEEEEEEEEC
PQETFELAHAKKSAYLKEYSRGDGQGWHFLTGNQEEITALADSVGFSYKWNSENEQWIHS
CHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHCCCEEEECCCCHHHHHC
SVAYVITPSGKISRYLHGITFDERTLKLSLLEASDGKIGDFTDQFALFCFQFDPGKNTYT
CEEEEEECCCHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEEEEECCCCCEEE
LYAYNIMKLGGFFTLFIMAVFLIPFWIRYNRNSELIRKE
EEEEEHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCC
>Mature Secondary Structure
MVFKNSLITGVVFYLFTTSLFPYDPAARFDKNEKPKELEGVGIQEKLGNQLDLSLSFHDE
CCCCHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCHHHCCCCHHHCCCEEEEEEEECCC
TGRKVFLSSFFKKDKPVLLSLVYYKCPTLCNFHLNGITDVLKKLNWEVGKEFEYVVVSFD
CCHHHHHHHHHCCCCCCEEHHHHHCCCCEEEEECCCHHHHHHHCCCCCCCCEEEEEEEEC
PQETFELAHAKKSAYLKEYSRGDGQGWHFLTGNQEEITALADSVGFSYKWNSENEQWIHS
CHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHCCCEEEECCCCHHHHHC
SVAYVITPSGKISRYLHGITFDERTLKLSLLEASDGKIGDFTDQFALFCFQFDPGKNTYT
CEEEEEECCCHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEEEEECCCCCEEE
LYAYNIMKLGGFFTLFIMAVFLIPFWIRYNRNSELIRKE
EEEEEHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA