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The map label for this gene is yfbQ [H]

Identifier: 116327090

GI number: 116327090

Start: 313936

End: 315135

Strand: Reverse

Name: yfbQ [H]

Synonym: LBL_0263

Alternate gene names: 116327090

Gene position: 315135-313936 (Counterclockwise)

Preceding gene: 116327091

Following gene: 116327081

Centisome position: 8.72

GC content: 37.25

Gene sequence:

>1200_bases
GTGAAAGAACCTTTTCTTTTTAGTTCCCGTTTTTCGTTTCAAGAAGGAGAAAACGAATTCGTCGCAATTTTATCCGAGTA
TAAGAAGAACCAAATTTTTTATTCGGATCTGACGGTTTCCAACCCAACTCAAGTCGGTTTTCAATATCCGGTGGAAGCGA
TTCGACACAGTTTTGGAAACACCGATCTGATCACTTATCACCCAGATCCTCGAGGAAACCTAGAAGCTCGAAAAAAAATT
CAAGAATATTACCAATCGAAAGGAGTGAAAGTCGATCCAGACGATTTGTTTTTAACCTCCTCCTCATCGGAAGCATATTC
GTATCTGTTTAAGTTATTTTGTGATCCCGGCGATTCCATTTTGATTCCTGCTCCCGGTTATCCTTTGTTCGAATTTCTTT
CCATAATGGAGGGCTTACAAACCGTCTCCTATTTCACAAAAAAAAGTAACGGTTGGAAATTAAAAGAATCCGATTTTAAT
CCAAAAGACTTATCAAAATGCAGATTGATTTTAATCGTAAGTCCCAACAATCCCACGGGCTCCGTATTAAACGAATCCGA
TTTTTATTCCTTAAAAAATACTTTAAAAAATTATAATATACCATTGGTTATAGACGAAGTTTTTTCGGACTACGTTTACG
GAGAAGATCTCCATAAGACTTTGACGGATTCGGATATACCGGTGATCACCGTAAATGGATTGTCTAAAATTCTGGGGCTT
CCGGGAATGAAACTATCTTGGATTTTACTCAGCGGACCGAAGTTTTGGAAACAAAAAGCAAAGGAATATTTAGAACTCAT
ATCCGATACCTATCTTTCCGTGAACACTCCCGTTCAAAACGTACTTTCTGATCTATTGCAATGGAAGAATTTAATTCAAT
CTCAAATTACCAAACGGATTCAAAGAAATCTTTCCTTTTTAAAACGAATTTTGAACGACGTGAATATTTCTAAAGTAGTT
CGATGTGATTTTCCGAATGCAGGTTGGTACTGCGTTTTAGAAAGCGAAAAATTTTTTCCGGAAGAGGAATTCTCACTTCG
TTTATTAAAGGAAAAAAAAGTATATGTTCATCCTGGAGAAATGTTCGGTTTTCCGAACGAAAAGAACCTGGGAAGAATCG
TCCTGAGCCTTTTGACGGAAACGGAATTGTTCGAGACAGGCTTGAAAGAAATTCTGTCGAAAGTTTCGATTCCACTTTAG

Upstream 100 bases:

>100_bases
AAAACTTTCGATTTTATTTTCCTTTGGCTACTTCGATATTAGTAAGCATCTTAATCTCCCTGGTTCTTTTTTTAATTCAA
AAATTCAAAAGCGGTTCTCC

Downstream 100 bases:

>100_bases
AACTTGTCCAAAAACTGTCTTCTGTGGGAGCGGCATTGCCGCGACACTGTCTTCCGTCCCCTGAATGTAGGAGTTCCCAC
GGATCATGACTCTTTGATAT

Product: aspartate/tyrosine/aromatic aminotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 399; Mature: 399

Protein sequence:

>399_residues
MKEPFLFSSRFSFQEGENEFVAILSEYKKNQIFYSDLTVSNPTQVGFQYPVEAIRHSFGNTDLITYHPDPRGNLEARKKI
QEYYQSKGVKVDPDDLFLTSSSSEAYSYLFKLFCDPGDSILIPAPGYPLFEFLSIMEGLQTVSYFTKKSNGWKLKESDFN
PKDLSKCRLILIVSPNNPTGSVLNESDFYSLKNTLKNYNIPLVIDEVFSDYVYGEDLHKTLTDSDIPVITVNGLSKILGL
PGMKLSWILLSGPKFWKQKAKEYLELISDTYLSVNTPVQNVLSDLLQWKNLIQSQITKRIQRNLSFLKRILNDVNISKVV
RCDFPNAGWYCVLESEKFFPEEEFSLRLLKEKKVYVHPGEMFGFPNEKNLGRIVLSLLTETELFETGLKEILSKVSIPL

Sequences:

>Translated_399_residues
MKEPFLFSSRFSFQEGENEFVAILSEYKKNQIFYSDLTVSNPTQVGFQYPVEAIRHSFGNTDLITYHPDPRGNLEARKKI
QEYYQSKGVKVDPDDLFLTSSSSEAYSYLFKLFCDPGDSILIPAPGYPLFEFLSIMEGLQTVSYFTKKSNGWKLKESDFN
PKDLSKCRLILIVSPNNPTGSVLNESDFYSLKNTLKNYNIPLVIDEVFSDYVYGEDLHKTLTDSDIPVITVNGLSKILGL
PGMKLSWILLSGPKFWKQKAKEYLELISDTYLSVNTPVQNVLSDLLQWKNLIQSQITKRIQRNLSFLKRILNDVNISKVV
RCDFPNAGWYCVLESEKFFPEEEFSLRLLKEKKVYVHPGEMFGFPNEKNLGRIVLSLLTETELFETGLKEILSKVSIPL
>Mature_399_residues
MKEPFLFSSRFSFQEGENEFVAILSEYKKNQIFYSDLTVSNPTQVGFQYPVEAIRHSFGNTDLITYHPDPRGNLEARKKI
QEYYQSKGVKVDPDDLFLTSSSSEAYSYLFKLFCDPGDSILIPAPGYPLFEFLSIMEGLQTVSYFTKKSNGWKLKESDFN
PKDLSKCRLILIVSPNNPTGSVLNESDFYSLKNTLKNYNIPLVIDEVFSDYVYGEDLHKTLTDSDIPVITVNGLSKILGL
PGMKLSWILLSGPKFWKQKAKEYLELISDTYLSVNTPVQNVLSDLLQWKNLIQSQITKRIQRNLSFLKRILNDVNISKVV
RCDFPNAGWYCVLESEKFFPEEEFSLRLLKEKKVYVHPGEMFGFPNEKNLGRIVLSLLTETELFETGLKEILSKVSIPL

Specific function: Unknown

COG id: COG0436

COG function: function code E; Aspartate/tyrosine/aromatic aminotransferase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]

Homologues:

Organism=Homo sapiens, GI4507369, Length=352, Percent_Identity=25.5681818181818, Blast_Score=114, Evalue=2e-25,
Organism=Homo sapiens, GI19263340, Length=177, Percent_Identity=27.1186440677966, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI215599424, Length=177, Percent_Identity=27.1186440677966, Blast_Score=69, Evalue=6e-12,
Organism=Homo sapiens, GI95147551, Length=389, Percent_Identity=19.0231362467866, Blast_Score=69, Evalue=8e-12,
Organism=Homo sapiens, GI169881279, Length=389, Percent_Identity=19.0231362467866, Blast_Score=69, Evalue=8e-12,
Organism=Escherichia coli, GI1788627, Length=368, Percent_Identity=26.9021739130435, Blast_Score=143, Evalue=2e-35,
Organism=Escherichia coli, GI1787710, Length=303, Percent_Identity=24.7524752475248, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1788722, Length=346, Percent_Identity=23.4104046242775, Blast_Score=72, Evalue=6e-14,
Organism=Escherichia coli, GI1788332, Length=172, Percent_Identity=27.906976744186, Blast_Score=68, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17567663, Length=364, Percent_Identity=24.7252747252747, Blast_Score=97, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI71981215, Length=150, Percent_Identity=28, Blast_Score=77, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI71981209, Length=150, Percent_Identity=28, Blast_Score=76, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI71994476, Length=351, Percent_Identity=22.7920227920228, Blast_Score=72, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI71994472, Length=351, Percent_Identity=22.7920227920228, Blast_Score=72, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI17567369, Length=353, Percent_Identity=24.0793201133144, Blast_Score=70, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6323118, Length=335, Percent_Identity=22.9850746268657, Blast_Score=78, Evalue=3e-15,
Organism=Saccharomyces cerevisiae, GI6320317, Length=135, Percent_Identity=25.9259259259259, Blast_Score=68, Evalue=3e-12,
Organism=Drosophila melanogaster, GI18859735, Length=357, Percent_Identity=24.6498599439776, Blast_Score=104, Evalue=1e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001176
- InterPro:   IPR004839
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00155 Aminotran_1_2 [H]

EC number: 2.6.1.- [C]

Molecular weight: Translated: 45778; Mature: 45778

Theoretical pI: Translated: 5.85; Mature: 5.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEPFLFSSRFSFQEGENEFVAILSEYKKNQIFYSDLTVSNPTQVGFQYPVEAIRHSFGN
CCCCCEECCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHCCHHHHHHHCCC
TDLITYHPDPRGNLEARKKIQEYYQSKGVKVDPDDLFLTSSSSEAYSYLFKLFCDPGDSI
CCEEEECCCCCCCHHHHHHHHHHHHHCCCEECCCCEEEECCCCHHHHHHHHHHCCCCCEE
LIPAPGYPLFEFLSIMEGLQTVSYFTKKSNGWKLKESDFNPKDLSKCRLILIVSPNNPTG
EECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCEEEEEEECCCCCCC
SVLNESDFYSLKNTLKNYNIPLVIDEVFSDYVYGEDLHKTLTDSDIPVITVNGLSKILGL
CCCCCHHHHHHHHHHHHCCCCEEEHHHHHHHHCCCHHHHHHCCCCCCEEEECCHHHHHCC
PGMKLSWILLSGPKFWKQKAKEYLELISDTYLSVNTPVQNVLSDLLQWKNLIQSQITKRI
CCCEEEEEEECCCHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHH
QRNLSFLKRILNDVNISKVVRCDFPNAGWYCVLESEKFFPEEEFSLRLLKEKKVYVHPGE
HHHHHHHHHHHCCCCHHHEEEECCCCCCEEEEECCCCCCCCHHHHHHEEECCEEEEECHH
MFGFPNEKNLGRIVLSLLTETELFETGLKEILSKVSIPL
HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKEPFLFSSRFSFQEGENEFVAILSEYKKNQIFYSDLTVSNPTQVGFQYPVEAIRHSFGN
CCCCCEECCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHCCHHHHHHHCCC
TDLITYHPDPRGNLEARKKIQEYYQSKGVKVDPDDLFLTSSSSEAYSYLFKLFCDPGDSI
CCEEEECCCCCCCHHHHHHHHHHHHHCCCEECCCCEEEECCCCHHHHHHHHHHCCCCCEE
LIPAPGYPLFEFLSIMEGLQTVSYFTKKSNGWKLKESDFNPKDLSKCRLILIVSPNNPTG
EECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCEEEEEEECCCCCCC
SVLNESDFYSLKNTLKNYNIPLVIDEVFSDYVYGEDLHKTLTDSDIPVITVNGLSKILGL
CCCCCHHHHHHHHHHHHCCCCEEEHHHHHHHHCCCHHHHHHCCCCCCEEEECCHHHHHCC
PGMKLSWILLSGPKFWKQKAKEYLELISDTYLSVNTPVQNVLSDLLQWKNLIQSQITKRI
CCCEEEEEEECCCHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHH
QRNLSFLKRILNDVNISKVVRCDFPNAGWYCVLESEKFFPEEEFSLRLLKEKKVYVHPGE
HHHHHHHHHHHCCCCHHHEEEECCCCCCEEEEECCCCCCCCHHHHHHEEECCEEEEECHH
MFGFPNEKNLGRIVLSLLTETELFETGLKEILSKVSIPL
HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: Pyridoxal Phosphate. [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]