Click here to switch to the map view.

The map label for this gene is 116327077

Identifier: 116327077

GI number: 116327077

Start: 299442

End: 299918

Strand: Reverse

Name: 116327077

Synonym: LBL_0250

Alternate gene names: NA

Gene position: 299918-299442 (Counterclockwise)

Preceding gene: 116327078

Following gene: 116327075

Centisome position: 8.3

GC content: 34.59

Gene sequence:

>477_bases
ATGACCCGAAAAAATATTTTAAAATTTGCATGGATCCTATTTTTGTTCGGATTCGGTTGTGCAACCAACTACAACGATTT
TGATAAACGAATCTACATAGTTGAAGGATTAAAAAAACAGAATATTCAAGAGGAAAAAATTCCAGAAAAACGAAAACCAA
ACGGCCTCTCTCAACTTCAATTGGTTACCATTCAAGAGGAAATCGGAATTCCGAATCTACTTTTGGAAAAAACTAAATTT
TCGGATGTGGAACTCAAATTCGGAAATCAGTATATTAAAAATTACCTATACTTAAATCCCGGAGAAAAAGGAATCCGTTA
TGAATCGTTAGGAATTTCTCTTATTTTTCGAGATTACGAAGATCCACTTCTCAAAGAAATAGGAATGGAACCCCCGTTTC
AAGCGGTTACCTCCAAAGGAATCATATTAGGAAAAAACACTTTACAGGAAGCAACTGTCGTCTATGTGGGAGATTAA

Upstream 100 bases:

>100_bases
CGGGAACTCAATGTCCTGAACTTTGGAATACATTAGTCAATAATTATCTTGTTTTCATGAAAAAGAAACCAAACTCTCCT
AAAAAGGAGCTCTCCTATTT

Downstream 100 bases:

>100_bases
GGAAGATTCTTATTGGTGTATTCGTTATAATTTTAAAAATTATGACGATGGAATTCGGTTTTGTGCCAAAAAAGATCCAT
CTATCTTTCCGGAATACGAT

Product: lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 157

Protein sequence:

>158_residues
MTRKNILKFAWILFLFGFGCATNYNDFDKRIYIVEGLKKQNIQEEKIPEKRKPNGLSQLQLVTIQEEIGIPNLLLEKTKF
SDVELKFGNQYIKNYLYLNPGEKGIRYESLGISLIFRDYEDPLLKEIGMEPPFQAVTSKGIILGKNTLQEATVVYVGD

Sequences:

>Translated_158_residues
MTRKNILKFAWILFLFGFGCATNYNDFDKRIYIVEGLKKQNIQEEKIPEKRKPNGLSQLQLVTIQEEIGIPNLLLEKTKF
SDVELKFGNQYIKNYLYLNPGEKGIRYESLGISLIFRDYEDPLLKEIGMEPPFQAVTSKGIILGKNTLQEATVVYVGD
>Mature_157_residues
TRKNILKFAWILFLFGFGCATNYNDFDKRIYIVEGLKKQNIQEEKIPEKRKPNGLSQLQLVTIQEEIGIPNLLLEKTKFS
DVELKFGNQYIKNYLYLNPGEKGIRYESLGISLIFRDYEDPLLKEIGMEPPFQAVTSKGIILGKNTLQEATVVYVGD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18199; Mature: 18068

Theoretical pI: Translated: 8.37; Mature: 8.37

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRKNILKFAWILFLFGFGCATNYNDFDKRIYIVEGLKKQNIQEEKIPEKRKPNGLSQLQ
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCHHHCCCCCCCCCCCEEE
LVTIQEEIGIPNLLLEKTKFSDVELKFGNQYIKNYLYLNPGEKGIRYESLGISLIFRDYE
EEEEHHHCCCCHHEECCCCCCCEEEEECHHHHHHEEEECCCCCCCEEECCCEEEEEECCC
DPLLKEIGMEPPFQAVTSKGIILGKNTLQEATVVYVGD
CHHHHHCCCCCCHHHHHCCCEEEECCCCCCEEEEEECC
>Mature Secondary Structure 
TRKNILKFAWILFLFGFGCATNYNDFDKRIYIVEGLKKQNIQEEKIPEKRKPNGLSQLQ
CHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCHHHCCCCCCCCCCCEEE
LVTIQEEIGIPNLLLEKTKFSDVELKFGNQYIKNYLYLNPGEKGIRYESLGISLIFRDYE
EEEEHHHCCCCHHEECCCCCCCEEEEECHHHHHHEEEECCCCCCCEEECCCEEEEEECCC
DPLLKEIGMEPPFQAVTSKGIILGKNTLQEATVVYVGD
CHHHHHCCCCCCHHHHHCCCEEEECCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA