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The map label for this gene is 116327062

Identifier: 116327062

GI number: 116327062

Start: 281877

End: 282956

Strand: Reverse

Name: 116327062

Synonym: LBL_0235

Alternate gene names: NA

Gene position: 282956-281877 (Counterclockwise)

Preceding gene: 116327063

Following gene: 116327055

Centisome position: 7.83

GC content: 38.24

Gene sequence:

>1080_bases
ATGTTTAAAAAAATTTTTCACTTTTTTTCAGTACTGATATTTCTTTCTCTATTCTTCTTGGGTTTTTTATTTTTACGTTC
GAATAAAAGTACCAACCAATATCTTTCCGATTCTCCCTTTGATCCCGGAAAAAATAATTTTCTCTTGGAATCGGAGTGGA
TCCATAAGGAAACTTTAAACCAACCTTACGGAATTGCAATTGATACCTCCGGTTTTGTTTATACCGGGACCGCAGATTAC
AAAATTGTACGAATCCGTACCAATGAAAAGGTAGAAACATTTGCGATCCTCGAGGGAAGGCCGTTGGGAATGGTTTTTGA
CTCAAATGGAAATCTCTTGGTTTGTGTGGAAGAAATCGGAATTGTAGAGATCAATAAAAGCGGTTCTCAAAGAATTCTGA
TTTCTAAACTTCCGGACGGTTCCCCGCTTCGATTTCCACACGGAATCGATGTGACTAAAAACGGGAAAATTTATTTCACC
GTTTCCAGTCGATCTTACTCTTTCAAAGAATCATTTTTAGAGGAGCTCTCCTCCAAATCAGATGGAATGATTTTAACGGC
GGATAAAGATATTAATTCATTAGAAATTTTGAATGAAAGTCTGTTTTATCCCACGGGGATCGCGTTATCATCCAACGAAC
AATTTTTACTCGTATCGGAACCGTTTCGTCACAGGATTTCTTCTATCCCATTGTCGGGCCAAAAAAAAGGTGTGGAAAAA
TTTTTTCTCACGAACATCCCGGGACTTCCGGCTTTGATTACCGGAAACTCCGGTTCTTTTTGGATTGGAGTTCCTTATTT
TAGAAACGAGGTTTTGGATAAGATTCAGGAGTATCCCGGAATTAAAAATTTACTGACGGGCCTACCCAATTTTCTTTTTG
CTAGAAACACACCCAGAGGTTTGATATTCGGGTTAAACGATTTCGGAGATATTACGGCCAATTATCAGGATTTTTCGGGT
TCTTCCGTTACGGGAATTACGGCGATTTTAAAACACGCGGGAAATATCTATCTCGTTTCTTCGACCACCGGTAAAATCGC
AAAAATGAAACCGATAATCGAAGAAATTCAATTTTTCTAA

Upstream 100 bases:

>100_bases
AAAATCGGAGAAGTAGGCCAAACCGGAAGAGCAACGGGAAATCATTTGCATTTTGAAGTCAGAAGATTCAATCAAAGACA
AAAACCTGTGTTTAGGGATC

Downstream 100 bases:

>100_bases
TACTCTAATCCTTACATAGACCCCAATACTTCTCTGAATCTTTCGAGAGGGAATCTATTTACGAAATCTCCGAATTTCTC
ATCGGAGTCCCCTTCTTCTT

Product: strictosidine synthase

Products: tryptamine; secologanin

Alternate protein names: Strictosidine Synthase Family Protein; Gluconolactonase; Inner-Membrane Translocator; Strictosidine Synthase Conserved Region; ABC Transporter Permease Protein; SMP-30/Gluconolaconase/LRE Domain Protein; Permease Protein Of Sugar ABC Transporter; Strictosidine Synthase Subfamily; ABC Transporter

Number of amino acids: Translated: 359; Mature: 359

Protein sequence:

>359_residues
MFKKIFHFFSVLIFLSLFFLGFLFLRSNKSTNQYLSDSPFDPGKNNFLLESEWIHKETLNQPYGIAIDTSGFVYTGTADY
KIVRIRTNEKVETFAILEGRPLGMVFDSNGNLLVCVEEIGIVEINKSGSQRILISKLPDGSPLRFPHGIDVTKNGKIYFT
VSSRSYSFKESFLEELSSKSDGMILTADKDINSLEILNESLFYPTGIALSSNEQFLLVSEPFRHRISSIPLSGQKKGVEK
FFLTNIPGLPALITGNSGSFWIGVPYFRNEVLDKIQEYPGIKNLLTGLPNFLFARNTPRGLIFGLNDFGDITANYQDFSG
SSVTGITAILKHAGNIYLVSSTTGKIAKMKPIIEEIQFF

Sequences:

>Translated_359_residues
MFKKIFHFFSVLIFLSLFFLGFLFLRSNKSTNQYLSDSPFDPGKNNFLLESEWIHKETLNQPYGIAIDTSGFVYTGTADY
KIVRIRTNEKVETFAILEGRPLGMVFDSNGNLLVCVEEIGIVEINKSGSQRILISKLPDGSPLRFPHGIDVTKNGKIYFT
VSSRSYSFKESFLEELSSKSDGMILTADKDINSLEILNESLFYPTGIALSSNEQFLLVSEPFRHRISSIPLSGQKKGVEK
FFLTNIPGLPALITGNSGSFWIGVPYFRNEVLDKIQEYPGIKNLLTGLPNFLFARNTPRGLIFGLNDFGDITANYQDFSG
SSVTGITAILKHAGNIYLVSSTTGKIAKMKPIIEEIQFF
>Mature_359_residues
MFKKIFHFFSVLIFLSLFFLGFLFLRSNKSTNQYLSDSPFDPGKNNFLLESEWIHKETLNQPYGIAIDTSGFVYTGTADY
KIVRIRTNEKVETFAILEGRPLGMVFDSNGNLLVCVEEIGIVEINKSGSQRILISKLPDGSPLRFPHGIDVTKNGKIYFT
VSSRSYSFKESFLEELSSKSDGMILTADKDINSLEILNESLFYPTGIALSSNEQFLLVSEPFRHRISSIPLSGQKKGVEK
FFLTNIPGLPALITGNSGSFWIGVPYFRNEVLDKIQEYPGIKNLLTGLPNFLFARNTPRGLIFGLNDFGDITANYQDFSG
SSVTGITAILKHAGNIYLVSSTTGKIAKMKPIIEEIQFF

Specific function: Unknown

COG id: COG3386

COG function: function code G; Gluconolactonase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI24308201, Length=366, Percent_Identity=30.6010928961749, Blast_Score=126, Evalue=3e-29,
Organism=Caenorhabditis elegans, GI17534469, Length=375, Percent_Identity=24.8, Blast_Score=101, Evalue=6e-22,
Organism=Caenorhabditis elegans, GI193207213, Length=326, Percent_Identity=23.9263803680982, Blast_Score=91, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17542364, Length=280, Percent_Identity=24.2857142857143, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI17137194, Length=209, Percent_Identity=26.3157894736842, Blast_Score=86, Evalue=5e-17,
Organism=Drosophila melanogaster, GI24650914, Length=398, Percent_Identity=22.6130653266332, Blast_Score=73, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 4.3.3.2

Molecular weight: Translated: 40151; Mature: 40151

Theoretical pI: Translated: 7.70; Mature: 7.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKKIFHFFSVLIFLSLFFLGFLFLRSNKSTNQYLSDSPFDPGKNNFLLESEWIHKETLN
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHCC
QPYGIAIDTSGFVYTGTADYKIVRIRTNEKVETFAILEGRPLGMVFDSNGNLLVCVEEIG
CCCCEEEECCCEEEECCCCEEEEEEECCCCEEEEEEECCCCEEEEEECCCCEEEEEECCC
IVEINKSGSQRILISKLPDGSPLRFPHGIDVTKNGKIYFTVSSRSYSFKESFLEELSSKS
EEEECCCCCCEEEEEECCCCCCCCCCCCCCEECCCEEEEEECCCCCHHHHHHHHHHHCCC
DGMILTADKDINSLEILNESLFYPTGIALSSNEQFLLVSEPFRHRISSIPLSGQKKGVEK
CCEEEEECCCCCHHHHHHHHCCCCCCEEECCCCCEEEECCHHHHHHHCCCCCCCHHCCHH
FFLTNIPGLPALITGNSGSFWIGVPYFRNEVLDKIQEYPGIKNLLTGLPNFLFARNTPRG
HHHCCCCCCCEEEECCCCCEEEECHHHHHHHHHHHHHCCCHHHHHHCCCHHEEECCCCCE
LIFGLNDFGDITANYQDFSGSSVTGITAILKHAGNIYLVSSTTGKIAKMKPIIEEIQFF
EEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MFKKIFHFFSVLIFLSLFFLGFLFLRSNKSTNQYLSDSPFDPGKNNFLLESEWIHKETLN
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHCC
QPYGIAIDTSGFVYTGTADYKIVRIRTNEKVETFAILEGRPLGMVFDSNGNLLVCVEEIG
CCCCEEEECCCEEEECCCCEEEEEEECCCCEEEEEEECCCCEEEEEECCCCEEEEEECCC
IVEINKSGSQRILISKLPDGSPLRFPHGIDVTKNGKIYFTVSSRSYSFKESFLEELSSKS
EEEECCCCCCEEEEEECCCCCCCCCCCCCCEECCCEEEEEECCCCCHHHHHHHHHHHCCC
DGMILTADKDINSLEILNESLFYPTGIALSSNEQFLLVSEPFRHRISSIPLSGQKKGVEK
CCEEEEECCCCCHHHHHHHHCCCCCCEEECCCCCEEEECCHHHHHHHCCCCCCCHHCCHH
FFLTNIPGLPALITGNSGSFWIGVPYFRNEVLDKIQEYPGIKNLLTGLPNFLFARNTPRG
HHHCCCCCCCEEEECCCCCEEEECHHHHHHHHHHHHHCCCHHHHHHCCCHHEEECCCCCE
LIFGLNDFGDITANYQDFSGSSVTGITAILKHAGNIYLVSSTTGKIAKMKPIIEEIQFF
EEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 3-alpha(S)-strictosidine

Specific reaction: 3-alpha(S)-strictosidine = tryptamine + secologanin

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA