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The map label for this gene is ylbK [H]

Identifier: 116327050

GI number: 116327050

Start: 267359

End: 268192

Strand: Reverse

Name: ylbK [H]

Synonym: LBL_0223

Alternate gene names: 116327050

Gene position: 268192-267359 (Counterclockwise)

Preceding gene: 116327051

Following gene: 116327049

Centisome position: 7.42

GC content: 39.33

Gene sequence:

>834_bases
ATGCAAATATACGTTAAACAAAAATTTACGGCTCTTACATTTAACTCCGCCTTTTTCGGTTTTTACGCACATGCGGGTTT
TGCAAAGGGACTTTCCGAAATCGGATTTTATCCTTCCAAAATTACGGGTTGTAGTTCGGGGGCCTTGATCGGCTCTCTTG
TTGCGGCCGGAGTTCCCATCGATACTGTGATCGATCTAATTTTAAATTTAAGGAAGAAGGATTTTTGGGAAGGGAATTTA
ATCACAAATTTCGTAAAGCCGATCCGCAAAGGATTGAAAAATTATTCCGGAATTCTTTCCGGCAAAAAGATCAAAGAGTT
GTTAAAACCGCATTTGGGTCATAAAAAGATAGAAGATCTTCCTATCCCAATGGGAATATCCGTTTCAAATATAACAAAAC
AAATCAGAGAACTCAAAACAAAAGGGGATTTAATCGACCGGATTCTCGCTTCTATGACATTTCCTTTCCTTTTTGAAATT
CAAAAGTTGGGAAAGGAAGAATTTATAGACGGAGGAGTCGCCGATCAGGAACCGATCAAGGAATTGATTTTAGATAAGTC
CATCCGTAAGATCGTAGTTCACAGCGTTCGCACCCAAAAAGGCCAATCCGAAAGAGCGATGATTCGCGCTTTTCATTCCT
CGATTCAGATCATCGAAAATGAAACAAGGAAACTAAAAGAATTACTGGCAAAACATTACAAAAAAGAAATATTAAGAGTC
GAAACGGTAACCCCTTATATAGACGCAAACCAACTTAGACATGGAAAGGATGCGATGGAAGAAGGAAGAAAAAGCGCGCA
CCACTGGAAGAAAAAGATTCTCACTCCCGCTTAA

Upstream 100 bases:

>100_bases
TGTGGTTAGTCTTCCTTTACTGGAAGGGAATCGGGAATATTTTTCATGGATTTTCAGCGAGGTTCTTGCGGAATAAAATA
TATTCAAAAAATATTACATT

Downstream 100 bases:

>100_bases
TTCCATTGAAACCAACCGTCGCAGAAATTACGGAGAACTACGTAAAACTTCATAAGGCTCTTTCCAAATTAATAAAAGCA
TCGATTTTCAATTATAAAAG

Product: Alpha-beta hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MQIYVKQKFTALTFNSAFFGFYAHAGFAKGLSEIGFYPSKITGCSSGALIGSLVAAGVPIDTVIDLILNLRKKDFWEGNL
ITNFVKPIRKGLKNYSGILSGKKIKELLKPHLGHKKIEDLPIPMGISVSNITKQIRELKTKGDLIDRILASMTFPFLFEI
QKLGKEEFIDGGVADQEPIKELILDKSIRKIVVHSVRTQKGQSERAMIRAFHSSIQIIENETRKLKELLAKHYKKEILRV
ETVTPYIDANQLRHGKDAMEEGRKSAHHWKKKILTPA

Sequences:

>Translated_277_residues
MQIYVKQKFTALTFNSAFFGFYAHAGFAKGLSEIGFYPSKITGCSSGALIGSLVAAGVPIDTVIDLILNLRKKDFWEGNL
ITNFVKPIRKGLKNYSGILSGKKIKELLKPHLGHKKIEDLPIPMGISVSNITKQIRELKTKGDLIDRILASMTFPFLFEI
QKLGKEEFIDGGVADQEPIKELILDKSIRKIVVHSVRTQKGQSERAMIRAFHSSIQIIENETRKLKELLAKHYKKEILRV
ETVTPYIDANQLRHGKDAMEEGRKSAHHWKKKILTPA
>Mature_277_residues
MQIYVKQKFTALTFNSAFFGFYAHAGFAKGLSEIGFYPSKITGCSSGALIGSLVAAGVPIDTVIDLILNLRKKDFWEGNL
ITNFVKPIRKGLKNYSGILSGKKIKELLKPHLGHKKIEDLPIPMGISVSNITKQIRELKTKGDLIDRILASMTFPFLFEI
QKLGKEEFIDGGVADQEPIKELILDKSIRKIVVHSVRTQKGQSERAMIRAFHSSIQIIENETRKLKELLAKHYKKEILRV
ETVTPYIDANQLRHGKDAMEEGRKSAHHWKKKILTPA

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR001423
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 31237; Mature: 31237

Theoretical pI: Translated: 10.46; Mature: 10.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIYVKQKFTALTFNSAFFGFYAHAGFAKGLSEIGFYPSKITGCSSGALIGSLVAAGVPI
CEEEEECCHHHEEECHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCHHHHHHHHHCCCCH
DTVIDLILNLRKKDFWEGNLITNFVKPIRKGLKNYSGILSGKKIKELLKPHLGHKKIEDL
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHCC
PIPMGISVSNITKQIRELKTKGDLIDRILASMTFPFLFEIQKLGKEEFIDGGVADQEPIK
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCHHHHH
ELILDKSIRKIVVHSVRTQKGQSERAMIRAFHSSIQIIENETRKLKELLAKHYKKEILRV
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ETVTPYIDANQLRHGKDAMEEGRKSAHHWKKKILTPA
HHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MQIYVKQKFTALTFNSAFFGFYAHAGFAKGLSEIGFYPSKITGCSSGALIGSLVAAGVPI
CEEEEECCHHHEEECHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCHHHHHHHHHCCCCH
DTVIDLILNLRKKDFWEGNLITNFVKPIRKGLKNYSGILSGKKIKELLKPHLGHKKIEDL
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHCC
PIPMGISVSNITKQIRELKTKGDLIDRILASMTFPFLFEIQKLGKEEFIDGGVADQEPIK
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCHHHHH
ELILDKSIRKIVVHSVRTQKGQSERAMIRAFHSSIQIIENETRKLKELLAKHYKKEILRV
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ETVTPYIDANQLRHGKDAMEEGRKSAHHWKKKILTPA
HHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]