| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
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The map label for this gene is 116327043
Identifier: 116327043
GI number: 116327043
Start: 258660
End: 260021
Strand: Reverse
Name: 116327043
Synonym: LBL_0216
Alternate gene names: NA
Gene position: 260021-258660 (Counterclockwise)
Preceding gene: 116327045
Following gene: 116327032
Centisome position: 7.19
GC content: 42.29
Gene sequence:
>1362_bases ATGTCTTTATATTCAAAACTTAAGAACTTATATCTTTGCATTATTCTTTGTTCTTCTCCAAGTTTAGTCGATTTGAAAGC GGAATCGAATGCTCCTCCTTATCACAACGCTGATCTTCCAGGGCAGATTGACGCCTCAGATAACTTCGCTGAAAATTCCG ACCCGCAAGAATCAGCCACAAACGAAAACGCTTCCGACGGTTTAAGCGTAGACGATCCCAGGAATCTTACCGAAGAATCG GACGGAGTTTCCTCCTATGAAAAAATTAAAAGAAAGGACCTTACACCGCAAGAACGACAAGAAATCGAATACGACCTACT GATTAAAAAAGGTATCCTCTCCGTTTTTCGAGCCGAAACCGAAAAGCGTTATAAAACTCTGGATCGGATCGCTCTTACTC ATCCGATTCCAAGGGTTAGAGCCGCGGCGGTTTTAGCAATCGGCAGAATAGGCAAAGGAAGAGTAAAAACTCTACATCGT GTTATCGAAAGAGACGGAGAAGCTGTCAGACAAGCCGCCTATAAAGCATTAGCCGATATCGGATCCCCCTCTTCTCTGAA TTACTTTTTCAGCGGAATCAAATCCAACGATCCGGACATTCAGTTTTCCTCTTGGAGAGGAATGGGTAAAACCAAGGATC CTTCCGCAAGAGACGCACTACTACGTCAGGGGATTCGTTCTTCCAGACGTGAAATTGTGAAGTCCTCCATATTAGGGCTC GCCGCATTTCAGATAAACGAGGATCTCAAACTTTTCAAAACATATCTGAATTCCGACGATCTCGAACTCCAAAAAACCGC AATCGAAGCCCTGGGAATCCATAAAACCCGAGCTTCATTAAGAATCTTAGAACAAACCATAGAAACAAAACCCGAATTCG CAAAAGACATCATAGAAGCGATCGGCAACAATACGAGTCTTTATGGAGCATATTCATTTATTAGAATATTGGAAAATTCA ACTTCCGAAGAATTGACTCAAAGAATTTTGGCGCAATTGTATCTCAGGAAGGCTTTTTATCAATTCGGGACCGTAAAGGT GGAAAACGGCTTCTCCCAGGAAAATCCGTATCCCACATCCCGCAAACTACGCGATCTTTCCGCCGGAGAAGTCGGAAAAA TTCTGAAAAAGAACGATCGCAGATTCATCCAAAAAATCGGAGATAAATTCGTGGAAGATTATTATTATCTTCTTCTTTTA GAATCCAAAAATCCGGAAAGTTATTACGAAACGTTTCAGTCCTGGGTATTCGGAGCATATCTGAAAATCAGAACGGTTAC AGCCCCGCATAAAGAGCCGAAAGGAAGAAAAGTCGGAAAATCTCCAAAAAAAGCCAAGCTACAAATTCACTCCCGCTTCT GA
Upstream 100 bases:
>100_bases AAATCATGCTTGTCACGGAAAAAGATAAGAAAAATCTGAAGAATCAGTCAAATTTATGAGTAGTCCCTTTACAGAAAACT TTACGTATCAAAGGTATCCA
Downstream 100 bases:
>100_bases AATGGAAGAAACCGATTCGGCTCCCCCAAACCAGAACGAAGGGGCCTCTACGGAAGAAAGCCTTCCTTTAGAGAACTGAT TCAAAAGATACATTTGATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 453; Mature: 452
Protein sequence:
>453_residues MSLYSKLKNLYLCIILCSSPSLVDLKAESNAPPYHNADLPGQIDASDNFAENSDPQESATNENASDGLSVDDPRNLTEES DGVSSYEKIKRKDLTPQERQEIEYDLLIKKGILSVFRAETEKRYKTLDRIALTHPIPRVRAAAVLAIGRIGKGRVKTLHR VIERDGEAVRQAAYKALADIGSPSSLNYFFSGIKSNDPDIQFSSWRGMGKTKDPSARDALLRQGIRSSRREIVKSSILGL AAFQINEDLKLFKTYLNSDDLELQKTAIEALGIHKTRASLRILEQTIETKPEFAKDIIEAIGNNTSLYGAYSFIRILENS TSEELTQRILAQLYLRKAFYQFGTVKVENGFSQENPYPTSRKLRDLSAGEVGKILKKNDRRFIQKIGDKFVEDYYYLLLL ESKNPESYYETFQSWVFGAYLKIRTVTAPHKEPKGRKVGKSPKKAKLQIHSRF
Sequences:
>Translated_453_residues MSLYSKLKNLYLCIILCSSPSLVDLKAESNAPPYHNADLPGQIDASDNFAENSDPQESATNENASDGLSVDDPRNLTEES DGVSSYEKIKRKDLTPQERQEIEYDLLIKKGILSVFRAETEKRYKTLDRIALTHPIPRVRAAAVLAIGRIGKGRVKTLHR VIERDGEAVRQAAYKALADIGSPSSLNYFFSGIKSNDPDIQFSSWRGMGKTKDPSARDALLRQGIRSSRREIVKSSILGL AAFQINEDLKLFKTYLNSDDLELQKTAIEALGIHKTRASLRILEQTIETKPEFAKDIIEAIGNNTSLYGAYSFIRILENS TSEELTQRILAQLYLRKAFYQFGTVKVENGFSQENPYPTSRKLRDLSAGEVGKILKKNDRRFIQKIGDKFVEDYYYLLLL ESKNPESYYETFQSWVFGAYLKIRTVTAPHKEPKGRKVGKSPKKAKLQIHSRF >Mature_452_residues SLYSKLKNLYLCIILCSSPSLVDLKAESNAPPYHNADLPGQIDASDNFAENSDPQESATNENASDGLSVDDPRNLTEESD GVSSYEKIKRKDLTPQERQEIEYDLLIKKGILSVFRAETEKRYKTLDRIALTHPIPRVRAAAVLAIGRIGKGRVKTLHRV IERDGEAVRQAAYKALADIGSPSSLNYFFSGIKSNDPDIQFSSWRGMGKTKDPSARDALLRQGIRSSRREIVKSSILGLA AFQINEDLKLFKTYLNSDDLELQKTAIEALGIHKTRASLRILEQTIETKPEFAKDIIEAIGNNTSLYGAYSFIRILENST SEELTQRILAQLYLRKAFYQFGTVKVENGFSQENPYPTSRKLRDLSAGEVGKILKKNDRRFIQKIGDKFVEDYYYLLLLE SKNPESYYETFQSWVFGAYLKIRTVTAPHKEPKGRKVGKSPKKAKLQIHSRF
Specific function: Unknown
COG id: COG1413
COG function: function code C; FOG: HEAT repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51249; Mature: 51118
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLYSKLKNLYLCIILCSSPSLVDLKAESNAPPYHNADLPGQIDASDNFAENSDPQESAT CCHHHHHHHHEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCC NENASDGLSVDDPRNLTEESDGVSSYEKIKRKDLTPQERQEIEYDLLIKKGILSVFRAET CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH EKRYKTLDRIALTHPIPRVRAAAVLAIGRIGKGRVKTLHRVIERDGEAVRQAAYKALADI HHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHC GSPSSLNYFFSGIKSNDPDIQFSSWRGMGKTKDPSARDALLRQGIRSSRREIVKSSILGL CCCCCHHHHHHCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AAFQINEDLKLFKTYLNSDDLELQKTAIEALGIHKTRASLRILEQTIETKPEFAKDIIEA HHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHH IGNNTSLYGAYSFIRILENSTSEELTQRILAQLYLRKAFYQFGTVKVENGFSQENPYPTS HCCCCEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCH RKLRDLSAGEVGKILKKNDRRFIQKIGDKFVEDYYYLLLLESKNPESYYETFQSWVFGAY HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEECCCCHHHHHHHHHHHHHHH LKIRTVTAPHKEPKGRKVGKSPKKAKLQIHSRF HEEEEEECCCCCCCCCCCCCCCCCCEEEEECCC >Mature Secondary Structure SLYSKLKNLYLCIILCSSPSLVDLKAESNAPPYHNADLPGQIDASDNFAENSDPQESAT CHHHHHHHHEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCC NENASDGLSVDDPRNLTEESDGVSSYEKIKRKDLTPQERQEIEYDLLIKKGILSVFRAET CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH EKRYKTLDRIALTHPIPRVRAAAVLAIGRIGKGRVKTLHRVIERDGEAVRQAAYKALADI HHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHC GSPSSLNYFFSGIKSNDPDIQFSSWRGMGKTKDPSARDALLRQGIRSSRREIVKSSILGL CCCCCHHHHHHCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AAFQINEDLKLFKTYLNSDDLELQKTAIEALGIHKTRASLRILEQTIETKPEFAKDIIEA HHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHH IGNNTSLYGAYSFIRILENSTSEELTQRILAQLYLRKAFYQFGTVKVENGFSQENPYPTS HCCCCEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCH RKLRDLSAGEVGKILKKNDRRFIQKIGDKFVEDYYYLLLLESKNPESYYETFQSWVFGAY HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEECCCCHHHHHHHHHHHHHHH LKIRTVTAPHKEPKGRKVGKSPKKAKLQIHSRF HEEEEEECCCCCCCCCCCCCCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA