| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
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The map label for this gene is 116326995
Identifier: 116326995
GI number: 116326995
Start: 195464
End: 196345
Strand: Direct
Name: 116326995
Synonym: LBL_0164
Alternate gene names: NA
Gene position: 195464-196345 (Clockwise)
Preceding gene: 116326994
Following gene: 116326996
Centisome position: 5.41
GC content: 39.12
Gene sequence:
>882_bases GTGAGAATCAACGTAAAATTAATTTTAAGCCTTTTAATTGTTTTTACCTTCCTGTCCTCTTGTTCTACTCAAAAAGAAGA TAAAAATACCTCAGACTTTCTTTTGCTTTTATTATTTCAAGATCGCGTTGAAAACTACGATCGCGATGTTCAAATCATAA CGCACACGATGGTGCCATCGGCCGGTGTTTCTTACGATACTAACTATCCCGATGAAGATTTAAACTATTATAAAGATCTT GTCGAAACTGAAATTGCAAGGTATCCAAGGGGATATTTTATCAAAGCACGCGCGGAAAAAATAGTATTCACTCGAAATCT CAATTTAAAAGGGAGGTACGCTGGAGCTCTATCAATACCGAGTCAAAATATTATATTTTTAGACGTTGAGGACGGGATAA AATCCAGATCAGAACTAACTCCTCTAGATTTTAACTATAATTTTTACTATTATAGTGCAGCCAGATTATCAAAGGTAATA CACCATGAACTTACGCATAGTATAGATGATACAATGGGATACTGGTGGGGTCCAAAATGGGAATCGTTAAATCCGCCTTC CTTTCAATATGGAAGAAGCTACCAATATGGTTCCAGTCCTCGTGCTTTGGGTCCGATCCGTCCTATATTAACTCCATTTT GGAATCCCATAGACGGTTTTGTGAGCGAATATGCCACGTCCAATTTTGCAGAAGATAGAGCGGAGATCGGCGCTGCAATT CAAGGACGTCATTTTTCGTATTTAGATGAAATTTGTGCCGTCGATCCGATCGTTGCCGCCAAAGTGCGTCTGACGATCGA TGAAATGAATCGTTTTTGGCCCTATCCTGGAGCGGAGAACACAGCCTGGAAACGTAGATTCAATGAAATTCAATGTAATT GA
Upstream 100 bases:
>100_bases ATTCGTATGTTTACGATTTTTTTAAGGTTTTTTGGCATAACTTGAACAACCTTTTCGTTATTCAATTGAGATGTTTTGAA AAACATCCGGAGCAAAATCC
Downstream 100 bases:
>100_bases TCGAATTTGTTAACAAAAACAAAATAACATTAGACACCATCAAACGACTCTTTTTTGCATCGAACTTCTATTTTTGAACG GGGTAACTGTTTTTAAGTTT
Product: lipoprotein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 293; Mature: 293
Protein sequence:
>293_residues MRINVKLILSLLIVFTFLSSCSTQKEDKNTSDFLLLLLFQDRVENYDRDVQIITHTMVPSAGVSYDTNYPDEDLNYYKDL VETEIARYPRGYFIKARAEKIVFTRNLNLKGRYAGALSIPSQNIIFLDVEDGIKSRSELTPLDFNYNFYYYSAARLSKVI HHELTHSIDDTMGYWWGPKWESLNPPSFQYGRSYQYGSSPRALGPIRPILTPFWNPIDGFVSEYATSNFAEDRAEIGAAI QGRHFSYLDEICAVDPIVAAKVRLTIDEMNRFWPYPGAENTAWKRRFNEIQCN
Sequences:
>Translated_293_residues MRINVKLILSLLIVFTFLSSCSTQKEDKNTSDFLLLLLFQDRVENYDRDVQIITHTMVPSAGVSYDTNYPDEDLNYYKDL VETEIARYPRGYFIKARAEKIVFTRNLNLKGRYAGALSIPSQNIIFLDVEDGIKSRSELTPLDFNYNFYYYSAARLSKVI HHELTHSIDDTMGYWWGPKWESLNPPSFQYGRSYQYGSSPRALGPIRPILTPFWNPIDGFVSEYATSNFAEDRAEIGAAI QGRHFSYLDEICAVDPIVAAKVRLTIDEMNRFWPYPGAENTAWKRRFNEIQCN >Mature_293_residues MRINVKLILSLLIVFTFLSSCSTQKEDKNTSDFLLLLLFQDRVENYDRDVQIITHTMVPSAGVSYDTNYPDEDLNYYKDL VETEIARYPRGYFIKARAEKIVFTRNLNLKGRYAGALSIPSQNIIFLDVEDGIKSRSELTPLDFNYNFYYYSAARLSKVI HHELTHSIDDTMGYWWGPKWESLNPPSFQYGRSYQYGSSPRALGPIRPILTPFWNPIDGFVSEYATSNFAEDRAEIGAAI QGRHFSYLDEICAVDPIVAAKVRLTIDEMNRFWPYPGAENTAWKRRFNEIQCN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33918; Mature: 33918
Theoretical pI: Translated: 5.71; Mature: 5.71
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRINVKLILSLLIVFTFLSSCSTQKEDKNTSDFLLLLLFQDRVENYDRDVQIITHTMVPS CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCC AGVSYDTNYPDEDLNYYKDLVETEIARYPRGYFIKARAEKIVFTRNLNLKGRYAGALSIP CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEECCCCCCEEEEEEECC SQNIIFLDVEDGIKSRSELTPLDFNYNFYYYSAARLSKVIHHELTHSIDDTMGYWWGPKW CCCEEEEECCCCCCCCCCCCCEEECCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCC ESLNPPSFQYGRSYQYGSSPRALGPIRPILTPFWNPIDGFVSEYATSNFAEDRAEIGAAI CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHH QGRHFSYLDEICAVDPIVAAKVRLTIDEMNRFWPYPGAENTAWKRRFNEIQCN CCCHHHHHHHHHHCCCHHHHEEEEEHHHHHHHCCCCCCCCHHHHHHHHHCCCC >Mature Secondary Structure MRINVKLILSLLIVFTFLSSCSTQKEDKNTSDFLLLLLFQDRVENYDRDVQIITHTMVPS CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCC AGVSYDTNYPDEDLNYYKDLVETEIARYPRGYFIKARAEKIVFTRNLNLKGRYAGALSIP CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEECCCCCCEEEEEEECC SQNIIFLDVEDGIKSRSELTPLDFNYNFYYYSAARLSKVIHHELTHSIDDTMGYWWGPKW CCCEEEEECCCCCCCCCCCCCEEECCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCC ESLNPPSFQYGRSYQYGSSPRALGPIRPILTPFWNPIDGFVSEYATSNFAEDRAEIGAAI CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHH QGRHFSYLDEICAVDPIVAAKVRLTIDEMNRFWPYPGAENTAWKRRFNEIQCN CCCHHHHHHHHHHCCCHHHHEEEEEHHHHHHHCCCCCCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA