| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
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The map label for this gene is 116326985
Identifier: 116326985
GI number: 116326985
Start: 182066
End: 184117
Strand: Reverse
Name: 116326985
Synonym: LBL_0154
Alternate gene names: NA
Gene position: 184117-182066 (Counterclockwise)
Preceding gene: 116326986
Following gene: 116326984
Centisome position: 5.09
GC content: 37.43
Gene sequence:
>2052_bases ATGAAATTCTTTAAATACATTCAAGAATTATCATATAAAAATCGAATTAAAGCTATTACGATTCTTCTGTTTCTGACTCT TGCGTTCGCGCTTTTTACGTTACTTTTTGTTTTTATCCGCCAAGATTTTTATAAGGATTTTATACTTACCGAAATTGAAA AAAAAACCGGTTTAGACGTAAAAGTGGACTCTTCCGATCTGGTTTTATTACCGTTTCCGGGAGTAGAACTGGGCACAGTT CAGGTTCGAAAAGGAAACCTTATCGTAGGAGTCAGCGATCGGATTAAGATCAATATTTCATGGTTCGGCTTATTAGGTCA GAAAGTAGAAATCAGAGACATTTATATTTCAGGCGGAAAGATCAATCTGCACAAACATAAAGACGGTTCCATTGATCTAA TCGAATTTTTTCAACAGGAAAAATACAAACTTGAAAGTGTTCACCAAACACAAACCATAAAAATTTTTGATTCATCGTTT ACGGCCGAAAACACGTTATTTAATCCGAAAGAGATTTTTAAAATCGGATTGAAAAACATTCAAATTGAAAATTTTCACGT TCACTACCAAGACGATACGCATGATAGAGAATACCTAATTTATCTTTGGAATTCGGCGTTCAGTATTTCTTTTTACGGAA ATGCCCTTGATCTTATTCTGCAGGGAAAATTAGACGGTCAAAGTTTTCAGATTTACGGAAGCGCAGATTTGAATGAATTT CCGGTAACCCTTGAAAACTTAAAATTTCAGTCTACGATCATTTTAGACAAGTGTTCTCTTTCCATCTTTAGGGATCTGTT GGTTGTCTTTCCGAACGCAGATTTTTCGAAAACGATCCTAAATGGCACAATCAGAATCAAAAAAGCGCCCAATGAACCGA TCAACTTCAATGTGACGGCACAAGGGAAGGACTTCGCTTATCAAGGCGGGAATCCGTTCGGTGACATCAAATTAAATATG GAACTGAGATTGGATATTCCGAATAAGAAATTGGATTTCCCATATATCTCCGTCGTATGGCCTGGGATCGCGGAAGGAAA CGCTAAGGGAACAATTCTATGGAATTATAAAACGAATGCGTTCTTTCAAGTCACCGCAAATTATTTAGATTACCACAGCG TACTCCGATTGGGCAAACTTTTCGAATTCACTAAGAAATTTAATAATCCGAATCGTCCGGACGGGGTTTTCTATTTCAGT GCGGATTTAAAAAACGTATATGCGCTCAAACACAGATTTCCGGTCCTAAAAGCGGAAGTGAAATACGTTTATCCTTGGAT TCAAATCTCTAATTTTCATGCATATATATATAACGGAGAAATATTAGGAAAATCTAAGATAAATCCGTTCAAATCCAAAT TCGAAGTCCAAGGGGAAGTGTATCGAATTCAATCAGATCGAGTTTTCATGCCTTATGTAAACGATCAGATCATCAGCGGG AACTTGTTCAGTAAGTTCAATTTTACTACGGAAGTTCACAATCAATCTTCCGATTTTTTGGCGGAATTTTTCAGGAATAT GGAAGGGTCCGGAAATTTTCAAATTCTCAACGGAGAGCTACTCGGTTATGCAAACTTTATGATTCCGGTCCTGAATACTC TCGGAAAAATCGTTTCATTCAACGGAATCGACGGAAGAAAGGTCGAATTCTCCTCTCTTAATTCGGATTTTAAAATCGAA AACAACCGATTTTACTTTCAAGATTTAAAATTACAAGGAAAAGGACTAGAAGCGGACGGAAGAGGAAACATCAGTTTCGA AAAAGATGTGGATCTTATTCTCAACTTAAGATTAGGCGGAAATATTGTCGGTAAAGCGTTAAAAATTCCGATCCTTTATA AGGGAAGATTCAAACAATCAATCCCTTATATAGATCCGATTTGGCTGGGCTCGGTCTTTGCGGGAAGCACGATCTTGGCC CCATTCTTTACTCTGGTCGGCGGACCTTACGGAGGAGGAATTGCCGGGTCAGTTGTATCCGAATATGTAAGAGATGCTTG GGAAGGATTTAAAGGACTGTTCGCGTCCAAAGAAAAAAACAAAAAAAAATAA
Upstream 100 bases:
>100_bases GTCCGATCGTTCAGGACTTTTGTAAATCGCAAACTCCCACTTGGAAGGAAATCGGAACCGATCAAAAAGCGCTCTGCCAT TTTCCACTGGATCGAAAAAA
Downstream 100 bases:
>100_bases CTTAGAAATCTTAAGGAGATTCTTTTCATGAAACCAAAATTATTCATTCGTATCACATCAATCTTGATTTTTATCTTCGC AGTCGGACATTCCATTGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 683; Mature: 683
Protein sequence:
>683_residues MKFFKYIQELSYKNRIKAITILLFLTLAFALFTLLFVFIRQDFYKDFILTEIEKKTGLDVKVDSSDLVLLPFPGVELGTV QVRKGNLIVGVSDRIKINISWFGLLGQKVEIRDIYISGGKINLHKHKDGSIDLIEFFQQEKYKLESVHQTQTIKIFDSSF TAENTLFNPKEIFKIGLKNIQIENFHVHYQDDTHDREYLIYLWNSAFSISFYGNALDLILQGKLDGQSFQIYGSADLNEF PVTLENLKFQSTIILDKCSLSIFRDLLVVFPNADFSKTILNGTIRIKKAPNEPINFNVTAQGKDFAYQGGNPFGDIKLNM ELRLDIPNKKLDFPYISVVWPGIAEGNAKGTILWNYKTNAFFQVTANYLDYHSVLRLGKLFEFTKKFNNPNRPDGVFYFS ADLKNVYALKHRFPVLKAEVKYVYPWIQISNFHAYIYNGEILGKSKINPFKSKFEVQGEVYRIQSDRVFMPYVNDQIISG NLFSKFNFTTEVHNQSSDFLAEFFRNMEGSGNFQILNGELLGYANFMIPVLNTLGKIVSFNGIDGRKVEFSSLNSDFKIE NNRFYFQDLKLQGKGLEADGRGNISFEKDVDLILNLRLGGNIVGKALKIPILYKGRFKQSIPYIDPIWLGSVFAGSTILA PFFTLVGGPYGGGIAGSVVSEYVRDAWEGFKGLFASKEKNKKK
Sequences:
>Translated_683_residues MKFFKYIQELSYKNRIKAITILLFLTLAFALFTLLFVFIRQDFYKDFILTEIEKKTGLDVKVDSSDLVLLPFPGVELGTV QVRKGNLIVGVSDRIKINISWFGLLGQKVEIRDIYISGGKINLHKHKDGSIDLIEFFQQEKYKLESVHQTQTIKIFDSSF TAENTLFNPKEIFKIGLKNIQIENFHVHYQDDTHDREYLIYLWNSAFSISFYGNALDLILQGKLDGQSFQIYGSADLNEF PVTLENLKFQSTIILDKCSLSIFRDLLVVFPNADFSKTILNGTIRIKKAPNEPINFNVTAQGKDFAYQGGNPFGDIKLNM ELRLDIPNKKLDFPYISVVWPGIAEGNAKGTILWNYKTNAFFQVTANYLDYHSVLRLGKLFEFTKKFNNPNRPDGVFYFS ADLKNVYALKHRFPVLKAEVKYVYPWIQISNFHAYIYNGEILGKSKINPFKSKFEVQGEVYRIQSDRVFMPYVNDQIISG NLFSKFNFTTEVHNQSSDFLAEFFRNMEGSGNFQILNGELLGYANFMIPVLNTLGKIVSFNGIDGRKVEFSSLNSDFKIE NNRFYFQDLKLQGKGLEADGRGNISFEKDVDLILNLRLGGNIVGKALKIPILYKGRFKQSIPYIDPIWLGSVFAGSTILA PFFTLVGGPYGGGIAGSVVSEYVRDAWEGFKGLFASKEKNKKK >Mature_683_residues MKFFKYIQELSYKNRIKAITILLFLTLAFALFTLLFVFIRQDFYKDFILTEIEKKTGLDVKVDSSDLVLLPFPGVELGTV QVRKGNLIVGVSDRIKINISWFGLLGQKVEIRDIYISGGKINLHKHKDGSIDLIEFFQQEKYKLESVHQTQTIKIFDSSF TAENTLFNPKEIFKIGLKNIQIENFHVHYQDDTHDREYLIYLWNSAFSISFYGNALDLILQGKLDGQSFQIYGSADLNEF PVTLENLKFQSTIILDKCSLSIFRDLLVVFPNADFSKTILNGTIRIKKAPNEPINFNVTAQGKDFAYQGGNPFGDIKLNM ELRLDIPNKKLDFPYISVVWPGIAEGNAKGTILWNYKTNAFFQVTANYLDYHSVLRLGKLFEFTKKFNNPNRPDGVFYFS ADLKNVYALKHRFPVLKAEVKYVYPWIQISNFHAYIYNGEILGKSKINPFKSKFEVQGEVYRIQSDRVFMPYVNDQIISG NLFSKFNFTTEVHNQSSDFLAEFFRNMEGSGNFQILNGELLGYANFMIPVLNTLGKIVSFNGIDGRKVEFSSLNSDFKIE NNRFYFQDLKLQGKGLEADGRGNISFEKDVDLILNLRLGGNIVGKALKIPILYKGRFKQSIPYIDPIWLGSVFAGSTILA PFFTLVGGPYGGGIAGSVVSEYVRDAWEGFKGLFASKEKNKKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 78000; Mature: 78000
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFFKYIQELSYKNRIKAITILLFLTLAFALFTLLFVFIRQDFYKDFILTEIEKKTGLDV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE KVDSSDLVLLPFPGVELGTVQVRKGNLIVGVSDRIKINISWFGLLGQKVEIRDIYISGGK EECCCCEEEEECCCCEEEEEEEEECCEEEEECCEEEEEEEEEEECCCEEEEEEEEEECCE INLHKHKDGSIDLIEFFQQEKYKLESVHQTQTIKIFDSSFTAENTLFNPKEIFKIGLKNI EEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCHHHHHHHCCCEE QIENFHVHYQDDTHDREYLIYLWNSAFSISFYGNALDLILQGKLDGQSFQIYGSADLNEF EEEEEEEEECCCCCCCEEEEEEECCEEEEEEECCEEEEEEEECCCCCEEEEEECCCCCCC PVTLENLKFQSTIILDKCSLSIFRDLLVVFPNADFSKTILNGTIRIKKAPNEPINFNVTA CEEHHCEEEEEEEEEEHHHHHHHHHHEEEECCCCCCHHEECCEEEEEECCCCCEEEEEEE QGKDFAYQGGNPFGDIKLNMELRLDIPNKKLDFPYISVVWPGIAEGNAKGTILWNYKTNA CCCCEEECCCCEEEEEEEEEEEEEECCCCCCCCCEEEEEECCCCCCCCCEEEEEEECCCE FFQVTANYLDYHSVLRLGKLFEFTKKFNNPNRPDGVFYFSADLKNVYALKHRFPVLKAEV EEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHCCCEEEEEE KYVYPWIQISNFHAYIYNGEILGKSKINPFKSKFEVQGEVYRIQSDRVFMPYVNDQIISG EEEEEEEEEEEEEEEEEECEEEECCCCCCCCHHEEECCEEEEEECCEEEECCCCCEEEEC NLFSKFNFTTEVHNQSSDFLAEFFRNMEGSGNFQILNGELLGYANFMIPVLNTLGKIVSF CCEEEEEEEEEECCCCHHHHHHHHHCCCCCCCEEEECCEEEEHHHHHHHHHHHHHHHEEE NGIDGRKVEFSSLNSDFKIENNRFYFQDLKLQGKGLEADGRGNISFEKDVDLILNLRLGG CCCCCCEEECCCCCCCEEEECCEEEEEEEEEECCCCCCCCCCCCEECCCCEEEEEEEECC NIVGKALKIPILYKGRFKQSIPYIDPIWLGSVFAGSTILAPFFTLVGGPYGGGIAGSVVS CEECCEEEEEEEECCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHH EYVRDAWEGFKGLFASKEKNKKK HHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MKFFKYIQELSYKNRIKAITILLFLTLAFALFTLLFVFIRQDFYKDFILTEIEKKTGLDV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE KVDSSDLVLLPFPGVELGTVQVRKGNLIVGVSDRIKINISWFGLLGQKVEIRDIYISGGK EECCCCEEEEECCCCEEEEEEEEECCEEEEECCEEEEEEEEEEECCCEEEEEEEEEECCE INLHKHKDGSIDLIEFFQQEKYKLESVHQTQTIKIFDSSFTAENTLFNPKEIFKIGLKNI EEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCHHHHHHHCCCEE QIENFHVHYQDDTHDREYLIYLWNSAFSISFYGNALDLILQGKLDGQSFQIYGSADLNEF EEEEEEEEECCCCCCCEEEEEEECCEEEEEEECCEEEEEEEECCCCCEEEEEECCCCCCC PVTLENLKFQSTIILDKCSLSIFRDLLVVFPNADFSKTILNGTIRIKKAPNEPINFNVTA CEEHHCEEEEEEEEEEHHHHHHHHHHEEEECCCCCCHHEECCEEEEEECCCCCEEEEEEE QGKDFAYQGGNPFGDIKLNMELRLDIPNKKLDFPYISVVWPGIAEGNAKGTILWNYKTNA CCCCEEECCCCEEEEEEEEEEEEEECCCCCCCCCEEEEEECCCCCCCCCEEEEEEECCCE FFQVTANYLDYHSVLRLGKLFEFTKKFNNPNRPDGVFYFSADLKNVYALKHRFPVLKAEV EEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHCCCEEEEEE KYVYPWIQISNFHAYIYNGEILGKSKINPFKSKFEVQGEVYRIQSDRVFMPYVNDQIISG EEEEEEEEEEEEEEEEEECEEEECCCCCCCCHHEEECCEEEEEECCEEEECCCCCEEEEC NLFSKFNFTTEVHNQSSDFLAEFFRNMEGSGNFQILNGELLGYANFMIPVLNTLGKIVSF CCEEEEEEEEEECCCCHHHHHHHHHCCCCCCCEEEECCEEEEHHHHHHHHHHHHHHHEEE NGIDGRKVEFSSLNSDFKIENNRFYFQDLKLQGKGLEADGRGNISFEKDVDLILNLRLGG CCCCCCEEECCCCCCCEEEECCEEEEEEEEEECCCCCCCCCCCCEECCCCEEEEEEEECC NIVGKALKIPILYKGRFKQSIPYIDPIWLGSVFAGSTILAPFFTLVGGPYGGGIAGSVVS CEECCEEEEEEEECCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHH EYVRDAWEGFKGLFASKEKNKKK HHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA