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The map label for this gene is 116326970

Identifier: 116326970

GI number: 116326970

Start: 157633

End: 158715

Strand: Reverse

Name: 116326970

Synonym: LBL_0136

Alternate gene names: NA

Gene position: 158715-157633 (Counterclockwise)

Preceding gene: 116326971

Following gene: 116326969

Centisome position: 4.39

GC content: 38.13

Gene sequence:

>1083_bases
ATGAAACAAGTATTCCAACTGATAAATATACAACTTAAGGAATTTTACAGGGAGCCTGCGATTCTTTTTTGGGCTTTCGT
ATTTCCGATCGCGATGGCAGGAGTCCTTGGAATCGCGTTTAAAAATCGAGGATCGGAAGAAGTCAAAATTGCAATATTAG
AAAACTCTTATCAGCTTGAAGAACTTAAAAAAGTCTTAGATTCCACCCGTAATAAAAACGAAAAATCGAAAGAAAAAACC
TTCACTCCTGATTCCGATAAACTTCCTTCCTTGAAGTTTTTGGTTCTTTCTAAAAACGAAGCGATTCGAGATCTTAAGAG
AGGAAAACTCAACATAATCGTTGAAAAGACACAAGGTAGAAAAATTCGTTTTTTCTTCGACACGGACAATCCGAACGGTC
AGAGAGATTATCTTTTGATTTTAGCAAAAATTCGCTCGAGTTATACGGACTTTGAATTGCAAGTGAATCGTTTAGATTCG
AAGGGGATGAGGTACATCGACTATTTAGTTCCCGGAATGCTTGCGATGGGTGTGATGAATTCCTGCCTCTGGGGAGTCGG
TTGGAATCTGATCGAAATGAGAATGAAAAAACTTTTACGGAGAATGTCCGCAACCCCGATGAGTAAATTGTCTTTTTTTC
TTTCCTTCTTTTTTACAAGATTGATCGTAACAACGATCGAATCAATAATTTTGCTCGGATTTACTTTGTTTACGTTTGAG
AACGCGTTGGAAGGCTCCTTCGGGACCATAATTATGATTTTCCTTTCCGGAAATTTCGCATTTTCCTGTATTGGTATATT
CGTCGGATCAAGGGCATCAAATTCTCAAGTCGGCAATGGGCTCATAAATGCGGTTACATTTCCTATGATGACTCTTTCCG
GAGTCTTTTTCTCTTATCAAAATTTTCCCGAAATCGTACTTCCGATAATCAAAAATCTTCCTTTGACTTTGATGGCGAAT
TCTTTAAGGACGGTTTTTATCGAAGGGGCGGGTTTCATTTCGGTGATTCCCGCCGTGATTACGTTATTTATATATGGAAT
CGTATTTCTTTTTGCAGGAAATAAAATTTTTCGCTGGTCTTGA

Upstream 100 bases:

>100_bases
GAACGATTTCCATTTCCGGAAAAAAACTAAGTACATTAGAATGCCATAAAAAAACCTTAGATGATCTTTTCCTTAGCATG
ACTGGAAGAGGATTAGGAGA

Downstream 100 bases:

>100_bases
TCGACACGGATTCAATAGTTTTAGAGATGTTTTCCTCTACTTTGAAGCAAGCTGCATATTCCACTTTTTTGAAACCGTTT
TTCCTCTCTTTGGACCCGGA

Product: ABC transporter permease

Products: NA

Alternate protein names: ABC Transporter Permease Protein; Multidrug ABC Transporter Permease; ABC Transporter Permease; ABC-Type Transporter Permease Protein; ABC Multidrug Efflux Pump Inner Membrane Subunit; Multidrug ABC Transporter Permease Component; Abc-2 Type Transporter; ABC-2 Type Transporter Family; ABC Transporter Permease Component; ABC-Type Efflux System Permease; Abc Transporter Permease Protein Abc-2 Family

Number of amino acids: Translated: 360; Mature: 360

Protein sequence:

>360_residues
MKQVFQLINIQLKEFYREPAILFWAFVFPIAMAGVLGIAFKNRGSEEVKIAILENSYQLEELKKVLDSTRNKNEKSKEKT
FTPDSDKLPSLKFLVLSKNEAIRDLKRGKLNIIVEKTQGRKIRFFFDTDNPNGQRDYLLILAKIRSSYTDFELQVNRLDS
KGMRYIDYLVPGMLAMGVMNSCLWGVGWNLIEMRMKKLLRRMSATPMSKLSFFLSFFFTRLIVTTIESIILLGFTLFTFE
NALEGSFGTIIMIFLSGNFAFSCIGIFVGSRASNSQVGNGLINAVTFPMMTLSGVFFSYQNFPEIVLPIIKNLPLTLMAN
SLRTVFIEGAGFISVIPAVITLFIYGIVFLFAGNKIFRWS

Sequences:

>Translated_360_residues
MKQVFQLINIQLKEFYREPAILFWAFVFPIAMAGVLGIAFKNRGSEEVKIAILENSYQLEELKKVLDSTRNKNEKSKEKT
FTPDSDKLPSLKFLVLSKNEAIRDLKRGKLNIIVEKTQGRKIRFFFDTDNPNGQRDYLLILAKIRSSYTDFELQVNRLDS
KGMRYIDYLVPGMLAMGVMNSCLWGVGWNLIEMRMKKLLRRMSATPMSKLSFFLSFFFTRLIVTTIESIILLGFTLFTFE
NALEGSFGTIIMIFLSGNFAFSCIGIFVGSRASNSQVGNGLINAVTFPMMTLSGVFFSYQNFPEIVLPIIKNLPLTLMAN
SLRTVFIEGAGFISVIPAVITLFIYGIVFLFAGNKIFRWS
>Mature_360_residues
MKQVFQLINIQLKEFYREPAILFWAFVFPIAMAGVLGIAFKNRGSEEVKIAILENSYQLEELKKVLDSTRNKNEKSKEKT
FTPDSDKLPSLKFLVLSKNEAIRDLKRGKLNIIVEKTQGRKIRFFFDTDNPNGQRDYLLILAKIRSSYTDFELQVNRLDS
KGMRYIDYLVPGMLAMGVMNSCLWGVGWNLIEMRMKKLLRRMSATPMSKLSFFLSFFFTRLIVTTIESIILLGFTLFTFE
NALEGSFGTIIMIFLSGNFAFSCIGIFVGSRASNSQVGNGLINAVTFPMMTLSGVFFSYQNFPEIVLPIIKNLPLTLMAN
SLRTVFIEGAGFISVIPAVITLFIYGIVFLFAGNKIFRWS

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40955; Mature: 40955

Theoretical pI: Translated: 10.32; Mature: 10.32

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQVFQLINIQLKEFYREPAILFWAFVFPIAMAGVLGIAFKNRGSEEVKIAILENSYQLE
CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCHH
ELKKVLDSTRNKNEKSKEKTFTPDSDKLPSLKFLVLSKNEAIRDLKRGKLNIIVEKTQGR
HHHHHHHHHCCCCCCHHHCCCCCCCCCCCCEEEEEEECCHHHHHHHCCCEEEEEEECCCC
KIRFFFDTDNPNGQRDYLLILAKIRSSYTDFELQVNRLDSKGMRYIDYLVPGMLAMGVMN
EEEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
SCLWGVGWNLIEMRMKKLLRRMSATPMSKLSFFLSFFFTRLIVTTIESIILLGFTLFTFE
HHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NALEGSFGTIIMIFLSGNFAFSCIGIFVGSRASNSQVGNGLINAVTFPMMTLSGVFFSYQ
HHHCCCCCEEEEEEEECCCHHHHHHHHHCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHC
NFPEIVLPIIKNLPLTLMANSLRTVFIEGAGFISVIPAVITLFIYGIVFLFAGNKIFRWS
CCHHHHHHHHCCCCHHHHHHCHHEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCEEEECC
>Mature Secondary Structure
MKQVFQLINIQLKEFYREPAILFWAFVFPIAMAGVLGIAFKNRGSEEVKIAILENSYQLE
CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCHH
ELKKVLDSTRNKNEKSKEKTFTPDSDKLPSLKFLVLSKNEAIRDLKRGKLNIIVEKTQGR
HHHHHHHHHCCCCCCHHHCCCCCCCCCCCCEEEEEEECCHHHHHHHCCCEEEEEEECCCC
KIRFFFDTDNPNGQRDYLLILAKIRSSYTDFELQVNRLDSKGMRYIDYLVPGMLAMGVMN
EEEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
SCLWGVGWNLIEMRMKKLLRRMSATPMSKLSFFLSFFFTRLIVTTIESIILLGFTLFTFE
HHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NALEGSFGTIIMIFLSGNFAFSCIGIFVGSRASNSQVGNGLINAVTFPMMTLSGVFFSYQ
HHHCCCCCEEEEEEEECCCHHHHHHHHHCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHC
NFPEIVLPIIKNLPLTLMANSLRTVFIEGAGFISVIPAVITLFIYGIVFLFAGNKIFRWS
CCHHHHHHHHCCCCHHHHHHCHHEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA