| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
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The map label for this gene is 116326968
Identifier: 116326968
GI number: 116326968
Start: 154922
End: 156370
Strand: Reverse
Name: 116326968
Synonym: LBL_0134
Alternate gene names: NA
Gene position: 156370-154922 (Counterclockwise)
Preceding gene: 116326969
Following gene: 116326967
Centisome position: 4.33
GC content: 42.03
Gene sequence:
>1449_bases ATGTTGAAAAGGTCATTGATTCTGATTTTGATTCTTTGTTTTTTTGTATGGGGATGTCCCATAAATCGGGGAAAGGATAA AAACTCAAAAAATTTGGAACTTCTTTTAGGATTGTATTTGCTCAACGAGACGAATTATTATTGTACACCGGAAGAAAACA TTCGAACCAGCGGAGACGCACCGAATTTTAGCGTCTCGAATTCCAGTCTAAGCCAGGTTCTTTTAACCGAAAGCGGAGGG TATCAAGACGGAGGAACGGCTTATCTTGTCGGAACAGTAAAGTTCCCCGGAATCGGAAAAAACAATCCGATGGGAATCGT TTATGCCGAACAGAATCATCAGTTTTCTTCCAACTTGAATCGTTTTATTTATCCGCTTTGGACAAACGCTTCGGGAGACT TGATTCAAGACAGCAGAAAAAGCGAATCATTGGGTTATAGATCCGTTACGACGGCTTTTCCTATAGGCGCCACTCCGGGA TATTATGCACCTAGTTCGAATTATAATAATTTCAACAATAATCTCTTAGGAGCAAATTTTATCGTGCCGACCGCGCCGGG TCCGTTAGTCGCTACGCGAAAAATCACGAATAACACGGTTCAAACTTGTGAAGAATACAAATTTCGTGCGGACCAGAATG GACTATTGGGAAGTTCCTCTTCGGGTTTGAAAAAGGTCTGGCAGTCTAGAAAAAAATTGAATATCAATTTGATTTTTATT CAAAATGCCGTAGCAACTCCAACCACAGCCGGGATGGCGACGATGATACAGACTTTAAAGGATATTTACGCGCAAGATAC GGTTAAAATCGACGTAACGGTCACAACTTCCTTAGTGCCCGCCGCTGCTGGAGCCCCTTACCTGACAGTCGTAAATATTT CAGACGATTATGGGGATGTGGTAGGTTCTTTAGGATCTCTTTATAGGAATAACCCATCTAATGTACAAGATTCAAATTCC TTGAATATTTACGTCACAAGAGATTATCAGATTTCGAGTAGTGCGCCTGCTGGAATTTTAGGGATTTCATCCGGTATACC CGGAATTCCGGTTAACGGAACTCCAAAATCAGGTATGGTCGTATTCATCGAAAATCATAGAACGTCTTCCGGATGCGGAG TGCAAGGGCAAGATTTAATCTGTGAGTCGGATCAGGTTTTTCTTGCTAAGACAATCGCTCATGAGGCCGGTCATTATTTA GGTCTTTATCATTTAGTAGAAAAAGACGTCGTCAAAGGGCGTTATTCTTTGGACCCACTTCCCGAAACTCCGGAATGTAA AGACCAAAACGGAAATAACATTGTAGGTTTAGGAGAATGTCTGGGCGAAGGGTTTTATGATAGCGGGGGACTCAATCTGA TGTTTTGGGCCGGAAATCCTAAGATAAATCAAACTCAATTGACGGGAGAACAAGGCTGGGTGCTTCGCTCACATCCTCTT GTATATTAA
Upstream 100 bases:
>100_bases AAAACGAATTTAGATCGCATAGGTTAAAAACAAAAAGTGTTTAATAAAAACAGGATATTTTAGAATATTAATATAAAATA TATATTAGGAATTGACAACT
Downstream 100 bases:
>100_bases AAAAATGGAATTAAATAAATCTATGATGAAAGTAAAAATAAGTTTCCACAGTATAATCGTCGCATTTTTATTCGGGATTC CTTTTGGAATCCAAGCTCAG
Product: lipoprotein
Products: NA
Alternate protein names: Lipoprotein
Number of amino acids: Translated: 482; Mature: 482
Protein sequence:
>482_residues MLKRSLILILILCFFVWGCPINRGKDKNSKNLELLLGLYLLNETNYYCTPEENIRTSGDAPNFSVSNSSLSQVLLTESGG YQDGGTAYLVGTVKFPGIGKNNPMGIVYAEQNHQFSSNLNRFIYPLWTNASGDLIQDSRKSESLGYRSVTTAFPIGATPG YYAPSSNYNNFNNNLLGANFIVPTAPGPLVATRKITNNTVQTCEEYKFRADQNGLLGSSSSGLKKVWQSRKKLNINLIFI QNAVATPTTAGMATMIQTLKDIYAQDTVKIDVTVTTSLVPAAAGAPYLTVVNISDDYGDVVGSLGSLYRNNPSNVQDSNS LNIYVTRDYQISSSAPAGILGISSGIPGIPVNGTPKSGMVVFIENHRTSSGCGVQGQDLICESDQVFLAKTIAHEAGHYL GLYHLVEKDVVKGRYSLDPLPETPECKDQNGNNIVGLGECLGEGFYDSGGLNLMFWAGNPKINQTQLTGEQGWVLRSHPL VY
Sequences:
>Translated_482_residues MLKRSLILILILCFFVWGCPINRGKDKNSKNLELLLGLYLLNETNYYCTPEENIRTSGDAPNFSVSNSSLSQVLLTESGG YQDGGTAYLVGTVKFPGIGKNNPMGIVYAEQNHQFSSNLNRFIYPLWTNASGDLIQDSRKSESLGYRSVTTAFPIGATPG YYAPSSNYNNFNNNLLGANFIVPTAPGPLVATRKITNNTVQTCEEYKFRADQNGLLGSSSSGLKKVWQSRKKLNINLIFI QNAVATPTTAGMATMIQTLKDIYAQDTVKIDVTVTTSLVPAAAGAPYLTVVNISDDYGDVVGSLGSLYRNNPSNVQDSNS LNIYVTRDYQISSSAPAGILGISSGIPGIPVNGTPKSGMVVFIENHRTSSGCGVQGQDLICESDQVFLAKTIAHEAGHYL GLYHLVEKDVVKGRYSLDPLPETPECKDQNGNNIVGLGECLGEGFYDSGGLNLMFWAGNPKINQTQLTGEQGWVLRSHPL VY >Mature_482_residues MLKRSLILILILCFFVWGCPINRGKDKNSKNLELLLGLYLLNETNYYCTPEENIRTSGDAPNFSVSNSSLSQVLLTESGG YQDGGTAYLVGTVKFPGIGKNNPMGIVYAEQNHQFSSNLNRFIYPLWTNASGDLIQDSRKSESLGYRSVTTAFPIGATPG YYAPSSNYNNFNNNLLGANFIVPTAPGPLVATRKITNNTVQTCEEYKFRADQNGLLGSSSSGLKKVWQSRKKLNINLIFI QNAVATPTTAGMATMIQTLKDIYAQDTVKIDVTVTTSLVPAAAGAPYLTVVNISDDYGDVVGSLGSLYRNNPSNVQDSNS LNIYVTRDYQISSSAPAGILGISSGIPGIPVNGTPKSGMVVFIENHRTSSGCGVQGQDLICESDQVFLAKTIAHEAGHYL GLYHLVEKDVVKGRYSLDPLPETPECKDQNGNNIVGLGECLGEGFYDSGGLNLMFWAGNPKINQTQLTGEQGWVLRSHPL VY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52209; Mature: 52209
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKRSLILILILCFFVWGCPINRGKDKNSKNLELLLGLYLLNETNYYCTPEENIRTSGDA CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEECCCCEEECCCCCCCCCCCC PNFSVSNSSLSQVLLTESGGYQDGGTAYLVGTVKFPGIGKNNPMGIVYAEQNHQFSSNLN CCEEECCCCCEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEECCCCCCCCCCC RFIYPLWTNASGDLIQDSRKSESLGYRSVTTAFPIGATPGYYAPSSNYNNFNNNLLGANF EEEEEEEECCCCCHHHCCCCHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEECEE IVPTAPGPLVATRKITNNTVQTCEEYKFRADQNGLLGSSSSGLKKVWQSRKKLNINLIFI EEECCCCCEEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHEEEEEEEE QNAVATPTTAGMATMIQTLKDIYAQDTVKIDVTVTTSLVPAAAGAPYLTVVNISDDYGDV ECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEEEEEECCCCCCCCEEEEEEECCHHHHH VGSLGSLYRNNPSNVQDSNSLNIYVTRDYQISSSAPAGILGISSGIPGIPVNGTPKSGMV HHHHHHHHCCCCCCCCCCCCEEEEEEECEEECCCCCCCEEEECCCCCCCCCCCCCCCCEE VFIENHRTSSGCGVQGQDLICESDQVFLAKTIAHEAGHYLGLYHLVEKDVVKGRYSLDPL EEEECCCCCCCCCCCCCCEEECCCCEEEHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCC PETPECKDQNGNNIVGLGECLGEGFYDSGGLNLMFWAGNPKINQTQLTGEQGWVLRSHPL CCCCCCCCCCCCEEEEHHHHHCCCCCCCCCCEEEEECCCCCCCCEEECCCCCEEEECCCC VY CC >Mature Secondary Structure MLKRSLILILILCFFVWGCPINRGKDKNSKNLELLLGLYLLNETNYYCTPEENIRTSGDA CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEECCCCEEECCCCCCCCCCCC PNFSVSNSSLSQVLLTESGGYQDGGTAYLVGTVKFPGIGKNNPMGIVYAEQNHQFSSNLN CCEEECCCCCEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEECCCCCCCCCCC RFIYPLWTNASGDLIQDSRKSESLGYRSVTTAFPIGATPGYYAPSSNYNNFNNNLLGANF EEEEEEEECCCCCHHHCCCCHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEECEE IVPTAPGPLVATRKITNNTVQTCEEYKFRADQNGLLGSSSSGLKKVWQSRKKLNINLIFI EEECCCCCEEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHEEEEEEEE QNAVATPTTAGMATMIQTLKDIYAQDTVKIDVTVTTSLVPAAAGAPYLTVVNISDDYGDV ECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEEEEEECCCCCCCCEEEEEEECCHHHHH VGSLGSLYRNNPSNVQDSNSLNIYVTRDYQISSSAPAGILGISSGIPGIPVNGTPKSGMV HHHHHHHHCCCCCCCCCCCCEEEEEEECEEECCCCCCCEEEECCCCCCCCCCCCCCCCEE VFIENHRTSSGCGVQGQDLICESDQVFLAKTIAHEAGHYLGLYHLVEKDVVKGRYSLDPL EEEECCCCCCCCCCCCCCEEECCCCEEEHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCC PETPECKDQNGNNIVGLGECLGEGFYDSGGLNLMFWAGNPKINQTQLTGEQGWVLRSHPL CCCCCCCCCCCCEEEEHHHHHCCCCCCCCCCEEEEECCCCCCCCEEECCCCCEEEECCCC VY CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA