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The map label for this gene is 116326956

Identifier: 116326956

GI number: 116326956

Start: 141121

End: 142089

Strand: Reverse

Name: 116326956

Synonym: LBL_0122

Alternate gene names: NA

Gene position: 142089-141121 (Counterclockwise)

Preceding gene: 116326957

Following gene: 116326955

Centisome position: 3.93

GC content: 39.83

Gene sequence:

>969_bases
ATGGACACGCGCGCAATTTTAGAAAATGTACTAAATCCACCGGTATTATTTTTCTTTCTCGGTATGGGTGTGGTTTTTTT
CAAATCAGACTTGGTTATCCCCGAATCACTATCCAAGTTCTTTTCAATGTATCTTCTTTTTGCCATTGGTTTTAAGGGGG
GACACGAGTTGTCCAGAACCATCTTTACCCAAGAACATTTTTTCACTTTAATTGCTTGTTCGATTATGGCCATTTTGGTT
CCGATATATGCATACTTCATTTTGAAAATTAAACTTGATAAACATAATGCTGCTGCTTTGGCCGGTTCTTTCGGGTCTAT
CAGTGCGGTCACTTTCGTAACCGCGGGCGCATTCTTACACAATCTCAAAGTCGAATACGGTGGCTTTATCGTTGCGGGAA
TGGCTTTGATGGAATCTCCTGCGATCGTAATTGCAGTGGTCTTGGATCGTTTGAATAAAAATAAAATGAATGGCGGAGGT
GGTATCAACTGGAAAGCATTATTGCATGAAGCTCTTTTTGGTTCTTCGATTTATCTTTTAGTTGGAGCATTGATTGTAGG
TTATATCACGGGTGATTCCGGTTGGAAAGCCGAGAAGGTGTTTGCTGACGACTTATTCAAAGGAATTCTTACGTTCTTTC
TTTTGGATATGGGAATTTCCGCAGCTCGTAGATTCAAAGAACTTGCTCATGTCGGATTCTTTTTGATCGCAACTGCTATT
GTTTTTATGGTTGTAAATGCAACGGTGGGTTTAGTTCTTACTAAAGTCATCGGAATGCCTGTTGGAGATGCTCTTATGTT
TGTTGTTCTTTGTGCTTCCGCTTCTTATATTGCGGTGCCTGCCGCTATGAAAGATATGATTCCCGAAGCGAACCCGAGTA
TTTATCTTACAGTTGCACTTTCTATCGTATTTCCGATCAACATAATTGTCGGTATTCCGCTCTATTATTATTTCGTGACT
TTAACTTAA

Upstream 100 bases:

>100_bases
AGGCTTTCATTTCTTTCCCTTTAAATCCATAGATTACTGCTATTTCGTTTGAGGTTTTAATCGAAGTCACGATATTCTTA
AATCACGGAGTTGGCTTATT

Downstream 100 bases:

>100_bases
GGAGAGGAAACCCGGATATTTTCTCGGCGATTGTTTTGAAGTTTGTTTTGAAAACTCGAATTTTCTACTACCAAGGAGAT
TCAAAATTTTTTGTATTTAG

Product: permease

Products: NA

Alternate protein names: Sodium-Dependent Bicarbonate Transporter; Sodium Bicarbonate Cotransporter; Conserved Domain Protein; Permease-Like Protein; SBT Type Permease Sodium-Bicarbonate; Membrane Permease; Domain Transmembrane Protein; Sodium Dependent Bicarbonate Transporter

Number of amino acids: Translated: 322; Mature: 322

Protein sequence:

>322_residues
MDTRAILENVLNPPVLFFFLGMGVVFFKSDLVIPESLSKFFSMYLLFAIGFKGGHELSRTIFTQEHFFTLIACSIMAILV
PIYAYFILKIKLDKHNAAALAGSFGSISAVTFVTAGAFLHNLKVEYGGFIVAGMALMESPAIVIAVVLDRLNKNKMNGGG
GINWKALLHEALFGSSIYLLVGALIVGYITGDSGWKAEKVFADDLFKGILTFFLLDMGISAARRFKELAHVGFFLIATAI
VFMVVNATVGLVLTKVIGMPVGDALMFVVLCASASYIAVPAAMKDMIPEANPSIYLTVALSIVFPINIIVGIPLYYYFVT
LT

Sequences:

>Translated_322_residues
MDTRAILENVLNPPVLFFFLGMGVVFFKSDLVIPESLSKFFSMYLLFAIGFKGGHELSRTIFTQEHFFTLIACSIMAILV
PIYAYFILKIKLDKHNAAALAGSFGSISAVTFVTAGAFLHNLKVEYGGFIVAGMALMESPAIVIAVVLDRLNKNKMNGGG
GINWKALLHEALFGSSIYLLVGALIVGYITGDSGWKAEKVFADDLFKGILTFFLLDMGISAARRFKELAHVGFFLIATAI
VFMVVNATVGLVLTKVIGMPVGDALMFVVLCASASYIAVPAAMKDMIPEANPSIYLTVALSIVFPINIIVGIPLYYYFVT
LT
>Mature_322_residues
MDTRAILENVLNPPVLFFFLGMGVVFFKSDLVIPESLSKFFSMYLLFAIGFKGGHELSRTIFTQEHFFTLIACSIMAILV
PIYAYFILKIKLDKHNAAALAGSFGSISAVTFVTAGAFLHNLKVEYGGFIVAGMALMESPAIVIAVVLDRLNKNKMNGGG
GINWKALLHEALFGSSIYLLVGALIVGYITGDSGWKAEKVFADDLFKGILTFFLLDMGISAARRFKELAHVGFFLIATAI
VFMVVNATVGLVLTKVIGMPVGDALMFVVLCASASYIAVPAAMKDMIPEANPSIYLTVALSIVFPINIIVGIPLYYYFVT
LT

Specific function: Unknown

COG id: COG3329

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34919; Mature: 34919

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTRAILENVLNPPVLFFFLGMGVVFFKSDLVIPESLSKFFSMYLLFAIGFKGGHELSRT
CCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHH
IFTQEHFFTLIACSIMAILVPIYAYFILKIKLDKHNAAALAGSFGSISAVTFVTAGAFLH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHCCCCCHHHHHHHHHHHHHH
NLKVEYGGFIVAGMALMESPAIVIAVVLDRLNKNKMNGGGGINWKALLHEALFGSSIYLL
HHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCHHHHH
VGALIVGYITGDSGWKAEKVFADDLFKGILTFFLLDMGISAARRFKELAHVGFFLIATAI
HHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
VFMVVNATVGLVLTKVIGMPVGDALMFVVLCASASYIAVPAAMKDMIPEANPSIYLTVAL
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEHHHHHHHCCCCCCCCEEEEHHH
SIVFPINIIVGIPLYYYFVTLT
HHHHHHHHHHHHHHHHEEEECC
>Mature Secondary Structure
MDTRAILENVLNPPVLFFFLGMGVVFFKSDLVIPESLSKFFSMYLLFAIGFKGGHELSRT
CCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHH
IFTQEHFFTLIACSIMAILVPIYAYFILKIKLDKHNAAALAGSFGSISAVTFVTAGAFLH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHCCCCCHHHHHHHHHHHHHH
NLKVEYGGFIVAGMALMESPAIVIAVVLDRLNKNKMNGGGGINWKALLHEALFGSSIYLL
HHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCHHHHH
VGALIVGYITGDSGWKAEKVFADDLFKGILTFFLLDMGISAARRFKELAHVGFFLIATAI
HHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
VFMVVNATVGLVLTKVIGMPVGDALMFVVLCASASYIAVPAAMKDMIPEANPSIYLTVAL
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEHHHHHHHCCCCCCCCEEEEHHH
SIVFPINIIVGIPLYYYFVTLT
HHHHHHHHHHHHHHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA