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The map label for this gene is 116326891

Identifier: 116326891

GI number: 116326891

Start: 54004

End: 54945

Strand: Reverse

Name: 116326891

Synonym: LBL_0045

Alternate gene names: NA

Gene position: 54945-54004 (Counterclockwise)

Preceding gene: 116326896

Following gene: 116326888

Centisome position: 1.52

GC content: 38.64

Gene sequence:

>942_bases
ATGATTTTGTCTCTTCGTTTCAAAAGAATTATAAGAACCTCGGGAATTGTTTTTATTTCCGGGTTTATCTATTACTTTTC
CACACAAATTGGAAGAGACGACTTGATTTATCCGGGCTATACTTCTCCGATTTGGCTTGCTTCGGGAGTCGCACTTGGTC
TTACTTTGCTTTTGGGAAACTGTGCAATTTTCGGGATTTTTTTAGCTTCTTTCCTTTCTAGTTCAGGAATGGATTTATCA
TCTGGAGTATGGATCGACATCGGAAAAAATTTATATCTTAGTTTTCTGATCGGTCTTTTTTCCGCGCTTCAAAGTTATAT
AGGCAAGGTCGTTCTTTCCGGTAGAATTCCCAAATACGGAATTTCAGATCGTACTCAGTTCGTATTTCTTTTTATTTTTC
TCGAAGCGATCGTATGTATCGTCGGCTCAATGGGTTCTGTGGCTTCGATGTATTTTTTAGGAAAGATTGAGTTTTCCTTA
ATTCGCCAAAGCTGGTTGACTTGGTGGATTAGAGACACACTCGGAGTTTATATCGGAACTCCGTTTATTCTTTTCTGGTT
TCAAGGTTATTATAAAATACCTCGATGGAAAGAATTTTTAGAATCCACGGTGTTGTTTCTTTTGATCGTATTCTTTTCTC
TTGCTTCTTTTGGTTTTATTACGTCAATTTCTTCCTTCGGTTATCCGTTAACCTATGTTTTAGTTCCGTTAATTCTGTGG
TCCGCATTTCGATTGGGAGAAAGGGCCAGTAGTTTGGCTGTCGTTCTTTCTTCTATTATTGCGATTTTGGGAATGGTTTT
GGAATCTCCACAGTTCTACGGGGAATCCATGAATGCGTCTAATATTCTCCTTCAATTCTTTGTTGCAGTATTGTCGATCA
CAAGTCTGCTCATTGCGAGCATGGTGAACGAAAGAAAGGAAGGAAGCGGAAAATCAGCTTAG

Upstream 100 bases:

>100_bases
TAATTTTTCCGAAAGGATGGAATCCTTCGTCGAAAATCATAAAGGGCTGGCCAGAGAATATGAGTTCTTCGATTATCATA
AAACAAACTTAATTGGATTA

Downstream 100 bases:

>100_bases
AATTTCCCATCAAAGTTTGGAAGAAAAGGTTGAAGAAAGGACTCGCGAGCTTCTGCGTTCCAACGAAATTCTTCGGGAAG
AAATTCAAGAGAAAAACGAG

Product: sensor histidine kinase

Products: NA

Alternate protein names: Signal Transduction Histidine Kinase; Periplasmic Sensor Signal Transduction Histidine Kinase; Histidine Kinase; Two-Component Sensor Histidine Kinase Protein; Two Component Sensor-Kinase; Histidine Kinase Sensor Protein; PleD Protein; Sensor Histidine Kinase And Response Regulator Protein; Multi-Sensor Signal Transduction Histidine Kinase

Number of amino acids: Translated: 313; Mature: 313

Protein sequence:

>313_residues
MILSLRFKRIIRTSGIVFISGFIYYFSTQIGRDDLIYPGYTSPIWLASGVALGLTLLLGNCAIFGIFLASFLSSSGMDLS
SGVWIDIGKNLYLSFLIGLFSALQSYIGKVVLSGRIPKYGISDRTQFVFLFIFLEAIVCIVGSMGSVASMYFLGKIEFSL
IRQSWLTWWIRDTLGVYIGTPFILFWFQGYYKIPRWKEFLESTVLFLLIVFFSLASFGFITSISSFGYPLTYVLVPLILW
SAFRLGERASSLAVVLSSIIAILGMVLESPQFYGESMNASNILLQFFVAVLSITSLLIASMVNERKEGSGKSA

Sequences:

>Translated_313_residues
MILSLRFKRIIRTSGIVFISGFIYYFSTQIGRDDLIYPGYTSPIWLASGVALGLTLLLGNCAIFGIFLASFLSSSGMDLS
SGVWIDIGKNLYLSFLIGLFSALQSYIGKVVLSGRIPKYGISDRTQFVFLFIFLEAIVCIVGSMGSVASMYFLGKIEFSL
IRQSWLTWWIRDTLGVYIGTPFILFWFQGYYKIPRWKEFLESTVLFLLIVFFSLASFGFITSISSFGYPLTYVLVPLILW
SAFRLGERASSLAVVLSSIIAILGMVLESPQFYGESMNASNILLQFFVAVLSITSLLIASMVNERKEGSGKSA
>Mature_313_residues
MILSLRFKRIIRTSGIVFISGFIYYFSTQIGRDDLIYPGYTSPIWLASGVALGLTLLLGNCAIFGIFLASFLSSSGMDLS
SGVWIDIGKNLYLSFLIGLFSALQSYIGKVVLSGRIPKYGISDRTQFVFLFIFLEAIVCIVGSMGSVASMYFLGKIEFSL
IRQSWLTWWIRDTLGVYIGTPFILFWFQGYYKIPRWKEFLESTVLFLLIVFFSLASFGFITSISSFGYPLTYVLVPLILW
SAFRLGERASSLAVVLSSIIAILGMVLESPQFYGESMNASNILLQFFVAVLSITSLLIASMVNERKEGSGKSA

Specific function: Unknown

COG id: COG3447

COG function: function code T; Predicted integral membrane sensor domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34864; Mature: 34864

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILSLRFKRIIRTSGIVFISGFIYYFSTQIGRDDLIYPGYTSPIWLASGVALGLTLLLGN
CEEHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
CAIFGIFLASFLSSSGMDLSSGVWIDIGKNLYLSFLIGLFSALQSYIGKVVLSGRIPKYG
HHHHHHHHHHHHCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
ISDRTQFVFLFIFLEAIVCIVGSMGSVASMYFLGKIEFSLIRQSWLTWWIRDTLGVYIGT
CCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PFILFWFQGYYKIPRWKEFLESTVLFLLIVFFSLASFGFITSISSFGYPLTYVLVPLILW
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
SAFRLGERASSLAVVLSSIIAILGMVLESPQFYGESMNASNILLQFFVAVLSITSLLIAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
MVNERKEGSGKSA
HHHHHHCCCCCCC
>Mature Secondary Structure
MILSLRFKRIIRTSGIVFISGFIYYFSTQIGRDDLIYPGYTSPIWLASGVALGLTLLLGN
CEEHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
CAIFGIFLASFLSSSGMDLSSGVWIDIGKNLYLSFLIGLFSALQSYIGKVVLSGRIPKYG
HHHHHHHHHHHHCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
ISDRTQFVFLFIFLEAIVCIVGSMGSVASMYFLGKIEFSLIRQSWLTWWIRDTLGVYIGT
CCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PFILFWFQGYYKIPRWKEFLESTVLFLLIVFFSLASFGFITSISSFGYPLTYVLVPLILW
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
SAFRLGERASSLAVVLSSIIAILGMVLESPQFYGESMNASNILLQFFVAVLSITSLLIAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
MVNERKEGSGKSA
HHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA