| Definition | Rhizobium leguminosarum bv. viciae 3841 plasmid pRL12, complete sequence. |
|---|---|
| Accession | NC_008378 |
| Length | 870,021 |
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The map label for this gene is yeiH [C]
Identifier: 116249406
GI number: 116249406
Start: 810253
End: 811314
Strand: Direct
Name: yeiH [C]
Synonym: pRL120744
Alternate gene names: 116249406
Gene position: 810253-811314 (Clockwise)
Preceding gene: 116249402
Following gene: 116249407
Centisome position: 93.13
GC content: 63.75
Gene sequence:
>1062_bases GTGTGGGAGATTACAGTCCTCCGCAAGGTCTCGCTGATGATCGTTTCCGCCTCACGTTCCCTGTCGCTTCCTGCCGTTCT GCCGGGGCTTGTCCTGTGTGCGGCAGTCACGCTCTCTGCCTATCTCGTTGAACAGTTGCAGATGATGATTTTCCGCTCGC ATTGGATCGAGAGCCTCGTGCTCGCCATTCTGATCGGCATTGCCGTGCGCTCCTCGGTCTGCCTGCCGCAGACCTTCATT CCCGGCATCCAATTCGCCGCCAAGACGCTGCTGGAGATTGCGGTCGTGTTGCTCGGCGCCTCGCTCAGCACGGCTGCCAT CAGGCAGGCTGGACTGCCACTTGTCGGTGGAATTGCCGTTCTGGTCGCTCTGTCTTTGGTCGGCAGCTTTGTTATCGGGC GGCTCTTCGGGCTGTCGGCCAGCCTGGCGACGTTGGTTGCTTGCGGCAACTCGATCTGCGGCAATTCCGCGATTGCCGCC GCAGCGCCGGTGATCGGCGCCAAACCGGACGATATCGCGGCCTCGATAGCCTTTACCGCACTGCTCGGCATCGGGGCGGT GCTGACGCTGCCGCTTCTTCATCTGCTCTTGGGTCTCAGCGCCGTACAATATGGCGTTTTCGCAGGCCTGACAGCCTATG CCGTCCCGCAGGTCTTGGCGGCCACGGCCTCTGCCGGAGCCGTCAGCATCCAGGTCGGCACGCTCGTCAAACTGATCCGC GTGATGATGCTCGGACCCGTCATCCTCGTGCTCGGCGCAGTTCATGGCCGCCGCCCTGGCGGTTCGCCAGTCAATCTCCG CCATCTTCTCCCATGGTTCATCATCGGTTTTGCAGCCATGGCGACGCTTCGTTCCCTCGACGCGATCCCGGCGCCGCTGC TGCCCGGGATGGCGGCTGTCTCCGCCGCCTTCACCGTCACCGCCATGGCCGCTTTGGGCCTCTCCGTCGATGTCAGATCC GTCGCCCATACCGGCGGGCGTGTCCTCGCAGCGGCGGCGCTGTCGCTGTTGGCGCTGGGGGCTCTCGGGCTTTGCCTGAT CGGGCTGCTGAATATCGTCTGA
Upstream 100 bases:
>100_bases ACCGCGACAAAAATGGAAAGCTGCTCAAACGTCATTGATTCAATCGTTCGATTTTAGCGAATGAACCATGCTATACTATT CAATGGAAGTCGACAATTGA
Downstream 100 bases:
>100_bases TCGAGGTGATATGCCTAAAATACTTGCAAAGATTCCGGTTGCCTTCCAAACGCTCAGCGGCTAGCCTGTATATACAGGTC AGACGGAAGCAAAGATCGTC
Product: putative transmembrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 353; Mature: 353
Protein sequence:
>353_residues MWEITVLRKVSLMIVSASRSLSLPAVLPGLVLCAAVTLSAYLVEQLQMMIFRSHWIESLVLAILIGIAVRSSVCLPQTFI PGIQFAAKTLLEIAVVLLGASLSTAAIRQAGLPLVGGIAVLVALSLVGSFVIGRLFGLSASLATLVACGNSICGNSAIAA AAPVIGAKPDDIAASIAFTALLGIGAVLTLPLLHLLLGLSAVQYGVFAGLTAYAVPQVLAATASAGAVSIQVGTLVKLIR VMMLGPVILVLGAVHGRRPGGSPVNLRHLLPWFIIGFAAMATLRSLDAIPAPLLPGMAAVSAAFTVTAMAALGLSVDVRS VAHTGGRVLAAAALSLLALGALGLCLIGLLNIV
Sequences:
>Translated_353_residues MWEITVLRKVSLMIVSASRSLSLPAVLPGLVLCAAVTLSAYLVEQLQMMIFRSHWIESLVLAILIGIAVRSSVCLPQTFI PGIQFAAKTLLEIAVVLLGASLSTAAIRQAGLPLVGGIAVLVALSLVGSFVIGRLFGLSASLATLVACGNSICGNSAIAA AAPVIGAKPDDIAASIAFTALLGIGAVLTLPLLHLLLGLSAVQYGVFAGLTAYAVPQVLAATASAGAVSIQVGTLVKLIR VMMLGPVILVLGAVHGRRPGGSPVNLRHLLPWFIIGFAAMATLRSLDAIPAPLLPGMAAVSAAFTVTAMAALGLSVDVRS VAHTGGRVLAAAALSLLALGALGLCLIGLLNIV >Mature_353_residues MWEITVLRKVSLMIVSASRSLSLPAVLPGLVLCAAVTLSAYLVEQLQMMIFRSHWIESLVLAILIGIAVRSSVCLPQTFI PGIQFAAKTLLEIAVVLLGASLSTAAIRQAGLPLVGGIAVLVALSLVGSFVIGRLFGLSASLATLVACGNSICGNSAIAA AAPVIGAKPDDIAASIAFTALLGIGAVLTLPLLHLLLGLSAVQYGVFAGLTAYAVPQVLAATASAGAVSIQVGTLVKLIR VMMLGPVILVLGAVHGRRPGGSPVNLRHLLPWFIIGFAAMATLRSLDAIPAPLLPGMAAVSAAFTVTAMAALGLSVDVRS VAHTGGRVLAAAALSLLALGALGLCLIGLLNIV
Specific function: Unknown
COG id: COG2855
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0324 family [H]
Homologues:
Organism=Escherichia coli, GI1788482, Length=281, Percent_Identity=27.4021352313167, Blast_Score=98, Evalue=9e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018383 [H]
Pfam domain/function: PF03601 Cons_hypoth698 [H]
EC number: NA
Molecular weight: Translated: 35671; Mature: 35671
Theoretical pI: Translated: 10.36; Mature: 10.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWEITVLRKVSLMIVSASRSLSLPAVLPGLVLCAAVTLSAYLVEQLQMMIFRSHWIESLV CCCHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAILIGIAVRSSVCLPQTFIPGIQFAAKTLLEIAVVLLGASLSTAAIRQAGLPLVGGIAV HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHH LVALSLVGSFVIGRLFGLSASLATLVACGNSICGNSAIAAAAPVIGAKPDDIAASIAFTA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHH LLGIGAVLTLPLLHLLLGLSAVQYGVFAGLTAYAVPQVLAATASAGAVSIQVGTLVKLIR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHH VMMLGPVILVLGAVHGRRPGGSPVNLRHLLPWFIIGFAAMATLRSLDAIPAPLLPGMAAV HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH SAAFTVTAMAALGLSVDVRSVAHTGGRVLAAAALSLLALGALGLCLIGLLNIV HHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MWEITVLRKVSLMIVSASRSLSLPAVLPGLVLCAAVTLSAYLVEQLQMMIFRSHWIESLV CCCHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAILIGIAVRSSVCLPQTFIPGIQFAAKTLLEIAVVLLGASLSTAAIRQAGLPLVGGIAV HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHH LVALSLVGSFVIGRLFGLSASLATLVACGNSICGNSAIAAAAPVIGAKPDDIAASIAFTA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHH LLGIGAVLTLPLLHLLLGLSAVQYGVFAGLTAYAVPQVLAATASAGAVSIQVGTLVKLIR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHH VMMLGPVILVLGAVHGRRPGGSPVNLRHLLPWFIIGFAAMATLRSLDAIPAPLLPGMAAV HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH SAAFTVTAMAALGLSVDVRSVAHTGGRVLAAAALSLLALGALGLCLIGLLNIV HHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA