| Definition | Rhizobium leguminosarum bv. viciae 3841 plasmid pRL12, complete sequence. |
|---|---|
| Accession | NC_008378 |
| Length | 870,021 |
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The map label for this gene is 116249376
Identifier: 116249376
GI number: 116249376
Start: 777974
End: 778612
Strand: Reverse
Name: 116249376
Synonym: pRL120714
Alternate gene names: NA
Gene position: 778612-777974 (Counterclockwise)
Preceding gene: 116249377
Following gene: 116249375
Centisome position: 89.49
GC content: 62.13
Gene sequence:
>639_bases ATGCCGGCAAATGCAGGCAGAGGGCCGTCGGGAGCTGCACTGCCCCCGCCCCCTTGGCTCGCCCATTCGCCATTGCCGAT CGACCTCATTGCGGCCGGGCAGGTTCTCCATAGGGTCCATCGGACGCATCTCGATCCCATCTTCTTTGGACCCGGCCCCG GGATTGCCGCCACCAATCGTTTCGACAGCGCCAGCGGACGTTTCGGAATTCTCTATGTCGGGATGAGCCGCAGGGGAGCG CTTGTGGAGACGATCCTGCGCAATCCCCAGCGGTTGATGGTGTCCATGACCGAAATCACCACCCGCGCCATCAGCGAACT CAGCTGTATCAGACCGCTGAGGATCGTGCGCATGCACGGAACCGGCCTGCAGGCACTCGGCACCGATAATGCCATTTCCA CCGGCCCTTACGAACCATGCGGCCATTGGACCGACGCGCTTTGGGACCATGCCGACCGGCCGGACGGTCTCGCCTACCAG TCGCGCCACGATTCGAACGAGATCTGCCTTGCCCTTTTCGAACGTGACGACATGGCGTTCAACAGAAAGGGCACGCTTCC GCTCTCCGGCATCCTCAAGGAGCTTGCCGCGATCCTCGAAGTCTACAGCAAGTCGCTGTCACCGGTCAGCCCTGTTTAG
Upstream 100 bases:
>100_bases CGGCTCTCGGTGGTCGGACAGCCCTGCAGGCGCTCCGCGACGGCGATCGTGAAGCAGTCCGGCGTCTGATCCGCATTGAA ACCTCCGACGGCTTTGCCTG
Downstream 100 bases:
>100_bases ACGGCGAACGCTGCTGCAGTTCAACGGATGATGGCACGTTGCCCTCGCCGCAATGCGCTGCAATTTTGCGATAAGTTGAT TTGTTTGGTCTTGTTTTCTG
Product: hypothetical protein
Products: NA
Alternate protein names: Res Family Protein
Number of amino acids: Translated: 212; Mature: 211
Protein sequence:
>212_residues MPANAGRGPSGAALPPPPWLAHSPLPIDLIAAGQVLHRVHRTHLDPIFFGPGPGIAATNRFDSASGRFGILYVGMSRRGA LVETILRNPQRLMVSMTEITTRAISELSCIRPLRIVRMHGTGLQALGTDNAISTGPYEPCGHWTDALWDHADRPDGLAYQ SRHDSNEICLALFERDDMAFNRKGTLPLSGILKELAAILEVYSKSLSPVSPV
Sequences:
>Translated_212_residues MPANAGRGPSGAALPPPPWLAHSPLPIDLIAAGQVLHRVHRTHLDPIFFGPGPGIAATNRFDSASGRFGILYVGMSRRGA LVETILRNPQRLMVSMTEITTRAISELSCIRPLRIVRMHGTGLQALGTDNAISTGPYEPCGHWTDALWDHADRPDGLAYQ SRHDSNEICLALFERDDMAFNRKGTLPLSGILKELAAILEVYSKSLSPVSPV >Mature_211_residues PANAGRGPSGAALPPPPWLAHSPLPIDLIAAGQVLHRVHRTHLDPIFFGPGPGIAATNRFDSASGRFGILYVGMSRRGAL VETILRNPQRLMVSMTEITTRAISELSCIRPLRIVRMHGTGLQALGTDNAISTGPYEPCGHWTDALWDHADRPDGLAYQS RHDSNEICLALFERDDMAFNRKGTLPLSGILKELAAILEVYSKSLSPVSPV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22962; Mature: 22830
Theoretical pI: Translated: 8.12; Mature: 8.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPANAGRGPSGAALPPPPWLAHSPLPIDLIAAGQVLHRVHRTHLDPIFFGPGPGIAATNR CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCC FDSASGRFGILYVGMSRRGALVETILRNPQRLMVSMTEITTRAISELSCIRPLRIVRMHG CCCCCCCEEEEEEECCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECC TGLQALGTDNAISTGPYEPCGHWTDALWDHADRPDGLAYQSRHDSNEICLALFERDDMAF CCCEECCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCC NRKGTLPLSGILKELAAILEVYSKSLSPVSPV CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure PANAGRGPSGAALPPPPWLAHSPLPIDLIAAGQVLHRVHRTHLDPIFFGPGPGIAATNR CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCC FDSASGRFGILYVGMSRRGALVETILRNPQRLMVSMTEITTRAISELSCIRPLRIVRMHG CCCCCCCEEEEEEECCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECC TGLQALGTDNAISTGPYEPCGHWTDALWDHADRPDGLAYQSRHDSNEICLALFERDDMAF CCCEECCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCC NRKGTLPLSGILKELAAILEVYSKSLSPVSPV CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA