| Definition | Rhizobium leguminosarum bv. viciae 3841 plasmid pRL12, complete sequence. |
|---|---|
| Accession | NC_008378 |
| Length | 870,021 |
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The map label for this gene is 116249362
Identifier: 116249362
GI number: 116249362
Start: 757892
End: 759073
Strand: Direct
Name: 116249362
Synonym: pRL120699
Alternate gene names: NA
Gene position: 757892-759073 (Clockwise)
Preceding gene: 116249361
Following gene: 116249363
Centisome position: 87.11
GC content: 63.03
Gene sequence:
>1182_bases ATGACGGAACAGCGTTTGAACGGGTTTCCGATGGGAGCCAAGGCGATGCTGGTCGCAATCGGCCTGGCGATGCTCGCCGG TTGCGCCACGAGACCGTCGCCCGATGTGTTGAACCCGGTCCATCAGCCCGTTCATCTCCCAGCTCATCTGAATGCATCGC TTCACTCCGATGAAGCCGCCCCAAGCCGGGTGAGTGTGCTCGCTGCGACGAACAGGAGCCTCGACACCGCACGCGGCGGG TTCGGCAGCACCTGGGCTGACAATCTCACCTACGAGCAATATGCGTTTTCGGTCCCTCCCGGCCGGAAGGACACCGCGAT CACCTATCCGACCTCGAGACCGGATCCCGAACGCCAATTTGCCGTCATCGGGCGCAAGCAGCTTGCAAAGGACGCCTTCG TAGAGGAGGCGCTCCGCTCTACGCAGTCCGACGGCACTGTCGGCATCTTCGTGCATGGCTATAACTATAGCTATCAGGAG GCGCTGTTTCGCACCGCGCAGATCGCCGCGGACGCCAACATTCCGGGCTCTCCGATTCTGTTTTCGTGGCCTTCGGCCGC AGCCGTCGCCGGCTATGTCGCCGATCGCGATGCGGCTCTCTCCTCGCGCAGCGATCTCGACTCGCTTGTGACCTCGCTCT CGGCGTCAGGAAAGGTGAAACGCATCATCCTTTTCGGACACAGCATGGGCGGATTTCTGGTCATGGAGACGGTGCGCGAG CTCAAACTGCAGCATCGCGACGACGTCATCGGCAAACTGGCGGTGATCCTCGCCGCCCCCGACATCGACGTCGATGTTTT CCGGTCCCAGCTGAAGGATATCGGGCGGATGCCGATGCCGATATCCCTTCTCGTTTCGAAGGACGACCGGGCGCTGGTGG CCTCGAGCTTCATAGCGGGAGAGCGGGCGCGCGTCGGACGCCTCGATATCGACGATCCCGTCATCAGGGAGGCTGCCTTG AAGGAAAGGCTTCGGGTCATCGACATCACGTCGATCCAGGCATCCGACGGGCTGGGGCATGACCGCTACGCATCGCTCGC CAAGTTCGGCGCGCAGCTTGCCTCCTTCGAAAGTGGCAGGCGGTCGAGCGCCGGTGACGTCGGCGCCTATGTCTTCGATG CCGCCGGCGCCGCAGTCGCAAGTCCGTTTCGTCTGGCCGGGCGTGTCGTCGGCTCGCAATGA
Upstream 100 bases:
>100_bases CAGGCCGAAGCCGCGGCAAAGGCATGAGCATGGGCCTTTACGTCCATCGCATGCGGCCGCCGCGGCGGCTGCATGTCCTG GTCTCCGAGGAGAGAGCTCG
Downstream 100 bases:
>100_bases TGAGAACTGGCCGCTGTTGGCGCGCTGCGCAATCCGGCCTTCGCGTCCTGACCGAATGAAAAGCGCCCGGCAATCGCCGG GCGCCTCATCCGACTGCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 393; Mature: 392
Protein sequence:
>393_residues MTEQRLNGFPMGAKAMLVAIGLAMLAGCATRPSPDVLNPVHQPVHLPAHLNASLHSDEAAPSRVSVLAATNRSLDTARGG FGSTWADNLTYEQYAFSVPPGRKDTAITYPTSRPDPERQFAVIGRKQLAKDAFVEEALRSTQSDGTVGIFVHGYNYSYQE ALFRTAQIAADANIPGSPILFSWPSAAAVAGYVADRDAALSSRSDLDSLVTSLSASGKVKRIILFGHSMGGFLVMETVRE LKLQHRDDVIGKLAVILAAPDIDVDVFRSQLKDIGRMPMPISLLVSKDDRALVASSFIAGERARVGRLDIDDPVIREAAL KERLRVIDITSIQASDGLGHDRYASLAKFGAQLASFESGRRSSAGDVGAYVFDAAGAAVASPFRLAGRVVGSQ
Sequences:
>Translated_393_residues MTEQRLNGFPMGAKAMLVAIGLAMLAGCATRPSPDVLNPVHQPVHLPAHLNASLHSDEAAPSRVSVLAATNRSLDTARGG FGSTWADNLTYEQYAFSVPPGRKDTAITYPTSRPDPERQFAVIGRKQLAKDAFVEEALRSTQSDGTVGIFVHGYNYSYQE ALFRTAQIAADANIPGSPILFSWPSAAAVAGYVADRDAALSSRSDLDSLVTSLSASGKVKRIILFGHSMGGFLVMETVRE LKLQHRDDVIGKLAVILAAPDIDVDVFRSQLKDIGRMPMPISLLVSKDDRALVASSFIAGERARVGRLDIDDPVIREAAL KERLRVIDITSIQASDGLGHDRYASLAKFGAQLASFESGRRSSAGDVGAYVFDAAGAAVASPFRLAGRVVGSQ >Mature_392_residues TEQRLNGFPMGAKAMLVAIGLAMLAGCATRPSPDVLNPVHQPVHLPAHLNASLHSDEAAPSRVSVLAATNRSLDTARGGF GSTWADNLTYEQYAFSVPPGRKDTAITYPTSRPDPERQFAVIGRKQLAKDAFVEEALRSTQSDGTVGIFVHGYNYSYQEA LFRTAQIAADANIPGSPILFSWPSAAAVAGYVADRDAALSSRSDLDSLVTSLSASGKVKRIILFGHSMGGFLVMETVREL KLQHRDDVIGKLAVILAAPDIDVDVFRSQLKDIGRMPMPISLLVSKDDRALVASSFIAGERARVGRLDIDDPVIREAALK ERLRVIDITSIQASDGLGHDRYASLAKFGAQLASFESGRRSSAGDVGAYVFDAAGAAVASPFRLAGRVVGSQ
Specific function: Unknown
COG id: COG4782
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41937; Mature: 41806
Theoretical pI: Translated: 7.82; Mature: 7.82
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEQRLNGFPMGAKAMLVAIGLAMLAGCATRPSPDVLNPVHQPVHLPAHLNASLHSDEAA CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCEECCHHCCCCCCCCCCC PSRVSVLAATNRSLDTARGGFGSTWADNLTYEQYAFSVPPGRKDTAITYPTSRPDPERQF CCCEEEEEECCCCCHHCCCCCCCCHHCCCCHHHEEEECCCCCCCCEEECCCCCCCCCHHH AVIGRKQLAKDAFVEEALRSTQSDGTVGIFVHGYNYSYQEALFRTAQIAADANIPGSPIL HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCEE FSWPSAAAVAGYVADRDAALSSRSDLDSLVTSLSASGKVKRIILFGHSMGGFLVMETVRE EECCCHHHHHHHHHCCHHHHCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHH LKLQHRDDVIGKLAVILAAPDIDVDVFRSQLKDIGRMPMPISLLVSKDDRALVASSFIAG HHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHCC ERARVGRLDIDDPVIREAALKERLRVIDITSIQASDGLGHDRYASLAKFGAQLASFESGR CCCCCCCCCCCCHHHHHHHHHHHHEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCC RSSAGDVGAYVFDAAGAAVASPFRLAGRVVGSQ CCCCCCCHHHHHHHCCHHHHCHHHHHHHHCCCC >Mature Secondary Structure TEQRLNGFPMGAKAMLVAIGLAMLAGCATRPSPDVLNPVHQPVHLPAHLNASLHSDEAA CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCEECCHHCCCCCCCCCCC PSRVSVLAATNRSLDTARGGFGSTWADNLTYEQYAFSVPPGRKDTAITYPTSRPDPERQF CCCEEEEEECCCCCHHCCCCCCCCHHCCCCHHHEEEECCCCCCCCEEECCCCCCCCCHHH AVIGRKQLAKDAFVEEALRSTQSDGTVGIFVHGYNYSYQEALFRTAQIAADANIPGSPIL HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCEE FSWPSAAAVAGYVADRDAALSSRSDLDSLVTSLSASGKVKRIILFGHSMGGFLVMETVRE EECCCHHHHHHHHHCCHHHHCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHH LKLQHRDDVIGKLAVILAAPDIDVDVFRSQLKDIGRMPMPISLLVSKDDRALVASSFIAG HHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHCC ERARVGRLDIDDPVIREAALKERLRVIDITSIQASDGLGHDRYASLAKFGAQLASFESGR CCCCCCCCCCCCHHHHHHHHHHHHEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCC RSSAGDVGAYVFDAAGAAVASPFRLAGRVVGSQ CCCCCCCHHHHHHHCCHHHHCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA