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The map label for this gene is ugpE [H]

Identifier: 116249344

GI number: 116249344

Start: 732184

End: 733068

Strand: Direct

Name: ugpE [H]

Synonym: pRL120681

Alternate gene names: 116249344

Gene position: 732184-733068 (Clockwise)

Preceding gene: 116249343

Following gene: 116249345

Centisome position: 84.16

GC content: 60.68

Gene sequence:

>885_bases
ATGACGATTGATCCGACCTCACTGCATCCGCATTCCGTGTCCCAGCATCGTCACCGCATATTGCGGCGCGTCGGCACCTT
CGTCAGCTACGCGGCACTTTCGCTGATCGCGCTGCTTTTCCTCTTCCCCTTCTTCTGGATGGTGTCGAACGCGGTGCGCT
CCAATGCCGAGGTGATGGCCGTGCCGGTCCGCATCTTCCCTGAGGAGTATCATTGGGGAACATTCGTCGAAGCCCTGGTT
TCCCTGCCGTTCGGAACCTTCCTGTTGAATTCCTTCGTGGTCGCCTGCGGCGTTACGGCGATCGTGATTGCGGTATCCTG
CCTGTCCGCCTACGCCTTCGCCCGCCTGAGGTTTCCCGGCCGGGAGGGGCTGCTGCTTACCTATCTCAGCACGCTGATGA
TCCCGCAGGTGATGCTGGTCATTCCGCTCTTCCTCATCGTCAGCAAGTTCGGCTGGATCAACACCTATCACGGCATGATC
CTGCCGGTCGCCTTCAGCTCTTTCGGCACCTTTCTGCTGCGGCAGTTCATCCTCGGCATTCCCAAGGATCTCGACGAGGC
GGCGATGATGGACGGAGCTTCGCGCCTGCGTATCCTGGTCACGGTCATCGTTCCGCTTGCCATGCCGGCCATCGGCCTGC
TGGCGCTGTTCACCTTCATCGCACAATGGAAGAGTTTCCTCTGGCCGCTGATCGCCACCAGCGGCGTCGAAATGGCCACG
CTGCCGCTCGGGCTCACCCTGTTCCAGACACAGCAGGGCACCGCGTGGAACTACATCATGGCCGGTGCGACGATCTCCAT
GGTGCCTGGTGTCATCCTGGCCATCGTGCTGCAGAGGGTAATCTACAAGGGCATTACCGTCAGCTCCGGCTTTGGTGGGC
GCTAA

Upstream 100 bases:

>100_bases
TTTCAGATGGGCTATGCCTCGGCTCTCGCCTGGGTGATGTTCGTCATGATCATGGCGCTCACCATCCTGCAATTCCACAT
GCAGCGCAAATGGGTGCACT

Downstream 100 bases:

>100_bases
TCTTCATAAGAACAAAGATTTAAGCGCATCGCATCAAGTTTGGTGTGATGCCCTTCAAGTCCGGTCGATCGCCGCCGAAA
TCATATCCTCGCGCTTGACT

Product: putative permease component of ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 294; Mature: 293

Protein sequence:

>294_residues
MTIDPTSLHPHSVSQHRHRILRRVGTFVSYAALSLIALLFLFPFFWMVSNAVRSNAEVMAVPVRIFPEEYHWGTFVEALV
SLPFGTFLLNSFVVACGVTAIVIAVSCLSAYAFARLRFPGREGLLLTYLSTLMIPQVMLVIPLFLIVSKFGWINTYHGMI
LPVAFSSFGTFLLRQFILGIPKDLDEAAMMDGASRLRILVTVIVPLAMPAIGLLALFTFIAQWKSFLWPLIATSGVEMAT
LPLGLTLFQTQQGTAWNYIMAGATISMVPGVILAIVLQRVIYKGITVSSGFGGR

Sequences:

>Translated_294_residues
MTIDPTSLHPHSVSQHRHRILRRVGTFVSYAALSLIALLFLFPFFWMVSNAVRSNAEVMAVPVRIFPEEYHWGTFVEALV
SLPFGTFLLNSFVVACGVTAIVIAVSCLSAYAFARLRFPGREGLLLTYLSTLMIPQVMLVIPLFLIVSKFGWINTYHGMI
LPVAFSSFGTFLLRQFILGIPKDLDEAAMMDGASRLRILVTVIVPLAMPAIGLLALFTFIAQWKSFLWPLIATSGVEMAT
LPLGLTLFQTQQGTAWNYIMAGATISMVPGVILAIVLQRVIYKGITVSSGFGGR
>Mature_293_residues
TIDPTSLHPHSVSQHRHRILRRVGTFVSYAALSLIALLFLFPFFWMVSNAVRSNAEVMAVPVRIFPEEYHWGTFVEALVS
LPFGTFLLNSFVVACGVTAIVIAVSCLSAYAFARLRFPGREGLLLTYLSTLMIPQVMLVIPLFLIVSKFGWINTYHGMIL
PVAFSSFGTFLLRQFILGIPKDLDEAAMMDGASRLRILVTVIVPLAMPAIGLLALFTFIAQWKSFLWPLIATSGVEMATL
PLGLTLFQTQQGTAWNYIMAGATISMVPGVILAIVLQRVIYKGITVSSGFGGR

Specific function: Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789860, Length=273, Percent_Identity=33.3333333333333, Blast_Score=137, Evalue=8e-34,
Organism=Escherichia coli, GI1787571, Length=274, Percent_Identity=29.9270072992701, Blast_Score=128, Evalue=5e-31,
Organism=Escherichia coli, GI1790464, Length=290, Percent_Identity=26.551724137931, Blast_Score=81, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32364; Mature: 32233

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHCHHEEECCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
TIDPTSLHPHSVSQHRHRILRRVGTFVSYAALSLIALLFLFPFFWMVSNAVRSNAEVMA
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
VPVRIFPEEYHWGTFVEALVSLPFGTFLLNSFVVACGVTAIVIAVSCLSAYAFARLRFPG
EEHEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
REGLLLTYLSTLMIPQVMLVIPLFLIVSKFGWINTYHGMILPVAFSSFGTFLLRQFILGI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PKDLDEAAMMDGASRLRILVTVIVPLAMPAIGLLALFTFIAQWKSFLWPLIATSGVEMAT
CCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
LPLGLTLFQTQQGTAWNYIMAGATISMVPGVILAIVLQRVIYKGITVSSGFGGR
HHHCHHEEECCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA