| Definition | Rhizobium leguminosarum bv. viciae 3841 plasmid pRL12, complete sequence. |
|---|---|
| Accession | NC_008378 |
| Length | 870,021 |
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The map label for this gene is 116249328
Identifier: 116249328
GI number: 116249328
Start: 715789
End: 717585
Strand: Direct
Name: 116249328
Synonym: pRL120665
Alternate gene names: NA
Gene position: 715789-717585 (Clockwise)
Preceding gene: 116249320
Following gene: 116249329
Centisome position: 82.27
GC content: 62.83
Gene sequence:
>1797_bases ATGTTCAGCGAGATTTCAGGGGAGCTGCCGGATGTGCTGGGCGATTTCACGCCCGGGGCGGTCTGCTCCGATCGCGCCCG ATGGAGCACTGTGCCGCAAGCGGTACGGGATCTGGTCATTCAGGAGGCCGAAGAGACGCTTGCGCGCGCCTGGCCGCTGA TTGCGGCCTCGGACTACCAGGAGTTCACCGCAACGGGCAACCGCTCGCGCTTCGAGGAGCTTTATTTCACGCGGCGGCGG ATGCTGAACAATCTGGTGCTCGGTGAACTCATTGAAGGCAAGGCGCGCTTCCTGCCGAAGATCGTCGATGGCATCTTCCT GATCGCGGAGGAGAGCGGCTGGCAGCTTCCGGCGCATAACGCCTATGAACGAAGCGGCGCGCGCTTGCCGCTTCCCGACA ATTCGCAGCCGGTCGTCGATCTCTTCGCCGCCGAAACGGCCGCCCTGCTTGCCACCATCGTCGCATTGCTTCGCGACGAG CTCGACGGCATCAGCCCCGAGATTACGGCACGCGTCGAGCGCGAGATCGAGATCCGCATCCTCTCGCCCTATCTCGGCCG GCATTTCTGGTGGATGGGCCGCGGCGAAGAGCGGATGAACAACTGGACGGCATGGATAAGCCAGAACGTCCTGTTGACGG TCTTCTCCCTGAAAACAAGTCAGCCCACGCGTCACGCCGTCGTCAAAAAGGCGCTCGGCAGCCTCGACGCCTTCCTGAAA GACTATGCCGAGGACGGAGCCTGCGAGGAGGGCGTGCTCTACTACCGTCACGCCGCGCTCTGCCTGCATGGTGCTTTGAC CATCCTGGATAGGGTGGCGCCGGGCCTGTTCGGCCGATTTTGGCAACAGCCGAAGATCCGAAACATGGCCGAATATATCG CTCACATGCATGTGGTCGGCCGCTACTATTTCAATTTCGCGGATTCTTCCGCTGTGGTCGAACCCTGCAGCGCGCGGGAA TACCTGTTCGGACGGGCGGTCGGCTCTGAGATGCTGGCTGAGTTCGCGGCATCCGACAGAGCCGCTTCAGACAATCCGCA CCTGCCCGGGGAATGGAACCTCTGGTATCGCGTGCAGGAACTGCTGGCCGGCCCGACGCTTCCCGCTGCCGCCCCGCCGC ATCCTGCATCCGGGCGCGATATCTTCTATCCCGGCATCGGCCTGTTCATCGCCCGCGACGGGCAGTTTTCGCTTGCCGTC AAGGGCGGCAACAATGGCGAAGGCCACAATCATAACGATGTCGGAAGCGTGACGCTTTACAAGAACGGACGTCCGTTCCT GATCGATGTCGGTGTCGAGACCTATACCGCAAAGACCTTTTCGGCGCGGCGCTACGAGATATGGACGATGCAGTCGACGT TCCACAACCTGCCGACATTCGCAGGCGTCATGCAGTCCGCCGGCGAAGCTTTTGGCGCGCGCGATGTCGAGGTTGGGTTC GACGAAGGGAGCGCGCGCATATCGCTCGATATATCGGGCGCCTATCCCCCCGAAGCGCAGCTGCACAGCTACCGCCGCGT CGTTTCCCTGCTGCGCGGCCGCCATGTCGAGATCGTCGACACCTATGACGGCGGCAAGCCGGCGGTCCTGTCGCTGATGA CATGCCTGGCGCCGACCGCCGGCCCGGACAGGATCGACCTGGCCGATCTCGGCAGCATTTTCGTCGAGGGCGCCGGCGAG ATCGAAATCGACGAAATCGTCGTGGACGACGCCCGGCTGAGATCGGCATGGCCCGAGAAAATCTACCGGCTGCGCCTGCC GTTTGCCGGCAGGCTGCTGAAAATGCGGATCGTCTAG
Upstream 100 bases:
>100_bases TGAATAGATCATACGAATTTTATGGAAAGCGAAAAATACATATGATAGGTGAGCATGCAGACCAAACACCCATCGATGCT TTTCCGGTACGGGGAGAGAC
Downstream 100 bases:
>100_bases AACCGGATGATTTTAGGCCGGGTCGGCCTGAAATCTGAATCCTGTTCTAAATTAAAGAGTTAGAGCATGATGCCGTCCGA AAATCGCTCACACTTTTCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 598; Mature: 598
Protein sequence:
>598_residues MFSEISGELPDVLGDFTPGAVCSDRARWSTVPQAVRDLVIQEAEETLARAWPLIAASDYQEFTATGNRSRFEELYFTRRR MLNNLVLGELIEGKARFLPKIVDGIFLIAEESGWQLPAHNAYERSGARLPLPDNSQPVVDLFAAETAALLATIVALLRDE LDGISPEITARVEREIEIRILSPYLGRHFWWMGRGEERMNNWTAWISQNVLLTVFSLKTSQPTRHAVVKKALGSLDAFLK DYAEDGACEEGVLYYRHAALCLHGALTILDRVAPGLFGRFWQQPKIRNMAEYIAHMHVVGRYYFNFADSSAVVEPCSARE YLFGRAVGSEMLAEFAASDRAASDNPHLPGEWNLWYRVQELLAGPTLPAAAPPHPASGRDIFYPGIGLFIARDGQFSLAV KGGNNGEGHNHNDVGSVTLYKNGRPFLIDVGVETYTAKTFSARRYEIWTMQSTFHNLPTFAGVMQSAGEAFGARDVEVGF DEGSARISLDISGAYPPEAQLHSYRRVVSLLRGRHVEIVDTYDGGKPAVLSLMTCLAPTAGPDRIDLADLGSIFVEGAGE IEIDEIVVDDARLRSAWPEKIYRLRLPFAGRLLKMRIV
Sequences:
>Translated_598_residues MFSEISGELPDVLGDFTPGAVCSDRARWSTVPQAVRDLVIQEAEETLARAWPLIAASDYQEFTATGNRSRFEELYFTRRR MLNNLVLGELIEGKARFLPKIVDGIFLIAEESGWQLPAHNAYERSGARLPLPDNSQPVVDLFAAETAALLATIVALLRDE LDGISPEITARVEREIEIRILSPYLGRHFWWMGRGEERMNNWTAWISQNVLLTVFSLKTSQPTRHAVVKKALGSLDAFLK DYAEDGACEEGVLYYRHAALCLHGALTILDRVAPGLFGRFWQQPKIRNMAEYIAHMHVVGRYYFNFADSSAVVEPCSARE YLFGRAVGSEMLAEFAASDRAASDNPHLPGEWNLWYRVQELLAGPTLPAAAPPHPASGRDIFYPGIGLFIARDGQFSLAV KGGNNGEGHNHNDVGSVTLYKNGRPFLIDVGVETYTAKTFSARRYEIWTMQSTFHNLPTFAGVMQSAGEAFGARDVEVGF DEGSARISLDISGAYPPEAQLHSYRRVVSLLRGRHVEIVDTYDGGKPAVLSLMTCLAPTAGPDRIDLADLGSIFVEGAGE IEIDEIVVDDARLRSAWPEKIYRLRLPFAGRLLKMRIV >Mature_598_residues MFSEISGELPDVLGDFTPGAVCSDRARWSTVPQAVRDLVIQEAEETLARAWPLIAASDYQEFTATGNRSRFEELYFTRRR MLNNLVLGELIEGKARFLPKIVDGIFLIAEESGWQLPAHNAYERSGARLPLPDNSQPVVDLFAAETAALLATIVALLRDE LDGISPEITARVEREIEIRILSPYLGRHFWWMGRGEERMNNWTAWISQNVLLTVFSLKTSQPTRHAVVKKALGSLDAFLK DYAEDGACEEGVLYYRHAALCLHGALTILDRVAPGLFGRFWQQPKIRNMAEYIAHMHVVGRYYFNFADSSAVVEPCSARE YLFGRAVGSEMLAEFAASDRAASDNPHLPGEWNLWYRVQELLAGPTLPAAAPPHPASGRDIFYPGIGLFIARDGQFSLAV KGGNNGEGHNHNDVGSVTLYKNGRPFLIDVGVETYTAKTFSARRYEIWTMQSTFHNLPTFAGVMQSAGEAFGARDVEVGF DEGSARISLDISGAYPPEAQLHSYRRVVSLLRGRHVEIVDTYDGGKPAVLSLMTCLAPTAGPDRIDLADLGSIFVEGAGE IEIDEIVVDDARLRSAWPEKIYRLRLPFAGRLLKMRIV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 66394; Mature: 66394
Theoretical pI: Translated: 5.41; Mature: 5.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSEISGELPDVLGDFTPGAVCSDRARWSTVPQAVRDLVIQEAEETLARAWPLIAASDYQ CCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH EFTATGNRSRFEELYFTRRRMLNNLVLGELIEGKARFLPKIVDGIFLIAEESGWQLPAHN HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCEEEEECCCCCCCCCCC AYERSGARLPLPDNSQPVVDLFAAETAALLATIVALLRDELDGISPEITARVEREIEIRI CHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHEECCEEEEEE LSPYLGRHFWWMGRGEERMNNWTAWISQNVLLTVFSLKTSQPTRHAVVKKALGSLDAFLK ECHHHCCCEEEECCCHHHHHHHHHHHHCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHH DYAEDGACEEGVLYYRHAALCLHGALTILDRVAPGLFGRFWQQPKIRNMAEYIAHMHVVG HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH RYYFNFADSSAVVEPCSAREYLFGRAVGSEMLAEFAASDRAASDNPHLPGEWNLWYRVQE HHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH LLAGPTLPAAAPPHPASGRDIFYPGIGLFIARDGQFSLAVKGGNNGEGHNHNDVGSVTLY HHCCCCCCCCCCCCCCCCCEEEECCCEEEEEECCCEEEEEECCCCCCCCCCCCCCEEEEE KNGRPFLIDVGVETYTAKTFSARRYEIWTMQSTFHNLPTFAGVMQSAGEAFGARDVEVGF ECCCEEEEECCCCEEEECCCCCCEEEEEEEHHHHHCCHHHHHHHHHHHHHCCCCCEEEEC DEGSARISLDISGAYPPEAQLHSYRRVVSLLRGRHVEIVDTYDGGKPAVLSLMTCLAPTA CCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCC GPDRIDLADLGSIFVEGAGEIEIDEIVVDDARLRSAWPEKIYRLRLPFAGRLLKMRIV CCCCCCHHHHHHHHCCCCCCEEEHHEEECCHHHHHHCHHHHHEECCCCCCCEEEEECC >Mature Secondary Structure MFSEISGELPDVLGDFTPGAVCSDRARWSTVPQAVRDLVIQEAEETLARAWPLIAASDYQ CCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH EFTATGNRSRFEELYFTRRRMLNNLVLGELIEGKARFLPKIVDGIFLIAEESGWQLPAHN HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCEEEEECCCCCCCCCCC AYERSGARLPLPDNSQPVVDLFAAETAALLATIVALLRDELDGISPEITARVEREIEIRI CHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHEECCEEEEEE LSPYLGRHFWWMGRGEERMNNWTAWISQNVLLTVFSLKTSQPTRHAVVKKALGSLDAFLK ECHHHCCCEEEECCCHHHHHHHHHHHHCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHH DYAEDGACEEGVLYYRHAALCLHGALTILDRVAPGLFGRFWQQPKIRNMAEYIAHMHVVG HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH RYYFNFADSSAVVEPCSAREYLFGRAVGSEMLAEFAASDRAASDNPHLPGEWNLWYRVQE HHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH LLAGPTLPAAAPPHPASGRDIFYPGIGLFIARDGQFSLAVKGGNNGEGHNHNDVGSVTLY HHCCCCCCCCCCCCCCCCCEEEECCCEEEEEECCCEEEEEECCCCCCCCCCCCCCEEEEE KNGRPFLIDVGVETYTAKTFSARRYEIWTMQSTFHNLPTFAGVMQSAGEAFGARDVEVGF ECCCEEEEECCCCEEEECCCCCCEEEEEEEHHHHHCCHHHHHHHHHHHHHCCCCCEEEEC DEGSARISLDISGAYPPEAQLHSYRRVVSLLRGRHVEIVDTYDGGKPAVLSLMTCLAPTA CCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCC GPDRIDLADLGSIFVEGAGEIEIDEIVVDDARLRSAWPEKIYRLRLPFAGRLLKMRIV CCCCCCHHHHHHHHCCCCCCEEEHHEEECCHHHHHHCHHHHHEECCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA