| Definition | Rhizobium leguminosarum bv. viciae 3841 plasmid pRL12, complete sequence. |
|---|---|
| Accession | NC_008378 |
| Length | 870,021 |
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The map label for this gene is 116249317
Identifier: 116249317
GI number: 116249317
Start: 705542
End: 705961
Strand: Direct
Name: 116249317
Synonym: pRL120654
Alternate gene names: NA
Gene position: 705542-705961 (Clockwise)
Preceding gene: 116249316
Following gene: 116249320
Centisome position: 81.09
GC content: 61.9
Gene sequence:
>420_bases ATGCAGCATCTCGACCATGCCATCCAGATCGCTCTCACAGCCCATGAAGGCCAGGCGGACAAGACCGGCCGGCCGTTCTT CGAGCACTGCCAGCGGGTAGCCCTTCTGGTTTCCGGTGACGAGACGCGAACGGTCGCCTACCTTCACGATGCGGTCGAGA AGGGCAATGGCTGGACTCTCGACAGGCTGAGGGAAGAAGGCTTTCCGCCGGCGATCATCTCCGCTGTAAAGGCTCTGACA CGGCGGCCGGACGAGCCGGATGACGACTTCGTCAGACGTGCGGCATCAAACGCGCTGGCCTTGCCCGTCAAGCGGGCCGA CCTCGAAGACAATCTCCGGCAGGCCGAACAGGCCGGCAAGAAAACGGAAAAATACCAGCGCGGCCTGGATCTCCTGCGCG ACATCAGGAACGGATCATAA
Upstream 100 bases:
>100_bases CTGTTCAGGCCGCCAAGGCTTCCGTGCCTGACATCGAGATGACGACGGGAGAAAAGCCTTCCCGGCGGAAGATCAGGAAG ACCGAGGGACCGTGATCGCC
Downstream 100 bases:
>100_bases TTTTGCACAGTTCGCAGGTAACGGCCATCGAGGGCGGCAATCGGCGAGCGCCCACTACCCGCCTCCCTGGCATGCACCGA AAGCCGTCTTGGCCTAGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: GTP Pyrophosphokinase; Metal Dependent Phosphohydrolase HD Region; Metal-Dependent Phosphohydrolase Hd Sub Domain; Guanosine Polyphosphate Pyrophosphohydrolases/Synthetases; Phage Protein; Guanosine-3 5-Bis(Diphosphate) 3-Diphosphatase; Metal Dependent Phosphohydrolase Hd Region
Number of amino acids: Translated: 139; Mature: 139
Protein sequence:
>139_residues MQHLDHAIQIALTAHEGQADKTGRPFFEHCQRVALLVSGDETRTVAYLHDAVEKGNGWTLDRLREEGFPPAIISAVKALT RRPDEPDDDFVRRAASNALALPVKRADLEDNLRQAEQAGKKTEKYQRGLDLLRDIRNGS
Sequences:
>Translated_139_residues MQHLDHAIQIALTAHEGQADKTGRPFFEHCQRVALLVSGDETRTVAYLHDAVEKGNGWTLDRLREEGFPPAIISAVKALT RRPDEPDDDFVRRAASNALALPVKRADLEDNLRQAEQAGKKTEKYQRGLDLLRDIRNGS >Mature_139_residues MQHLDHAIQIALTAHEGQADKTGRPFFEHCQRVALLVSGDETRTVAYLHDAVEKGNGWTLDRLREEGFPPAIISAVKALT RRPDEPDDDFVRRAASNALALPVKRADLEDNLRQAEQAGKKTEKYQRGLDLLRDIRNGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15582; Mature: 15582
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQHLDHAIQIALTAHEGQADKTGRPFFEHCQRVALLVSGDETRTVAYLHDAVEKGNGWTL CCCHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCH DRLREEGFPPAIISAVKALTRRPDEPDDDFVRRAASNALALPVKRADLEDNLRQAEQAGK HHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHH KTEKYQRGLDLLRDIRNGS HHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MQHLDHAIQIALTAHEGQADKTGRPFFEHCQRVALLVSGDETRTVAYLHDAVEKGNGWTL CCCHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCH DRLREEGFPPAIISAVKALTRRPDEPDDDFVRRAASNALALPVKRADLEDNLRQAEQAGK HHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHH KTEKYQRGLDLLRDIRNGS HHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA