Definition Rhizobium leguminosarum bv. viciae 3841 plasmid pRL12, complete sequence.
Accession NC_008378
Length 870,021

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The map label for this gene is 116249290

Identifier: 116249290

GI number: 116249290

Start: 679396

End: 681090

Strand: Reverse

Name: 116249290

Synonym: pRL120625

Alternate gene names: NA

Gene position: 681090-679396 (Counterclockwise)

Preceding gene: 116249291

Following gene: 116249289

Centisome position: 78.28

GC content: 60.06

Gene sequence:

>1695_bases
ATGACGGATCAAACAAAAATGCCTGAGCCCGCGCCGATCAACTACTACTATCTCTGGCACCTGACTGCTCTTGGCGTAGT
CGACGCGGAATACGGATCGGCTCCGCCGATGCCTCCAGCGCCCGATGCGAGCGCCGCACGCGCGCTCCCCGATCCCCTCA
TCACCGGCACGGTCTGGGATGCCATCGTTTCCGCCGGCCCGTTGCGGCCGGCACGGGTCGCGCTGATCGATGTCGGCGTA
TCTCCGGATCATCCCAATCTGGCAACCCGGCTTGACCGGGAGGCGTCAATCGATTTGACGACCCATCGTTACGGCGCCCG
CGTGCTCGAAATTCTCGATACGACCACGTCCTTCGACCGCGAGGAAAGACATGCCTTCTTTGCCGGGCTCGACATTGCTC
CGCTCGGCAATATGGGCCTTTCGAACGACGATCGGGACTATCTTGGTGATCTGGTTGCCGAATACGCCGCGTCGGAGGGT
GTCCTCCGGCGGCTCTATAATCCGGAATCGCTGTTTGCGTCGCATGGTACCTGCTGCGCAGGGCTGATCGTCGGCGAACC
CGCCGTTGTTGCGGAAGAAGGCACGCCAAGCCTTCCGCCGGAAGGAGCCTTCTACGGGAATGGCGACGAGCTGCGGACGA
GCGGCAATCGCAATGTTATCCCCTATTTCGGCGTTGACCCTTTCTCAAGGCTTATCTCGATCAGAACATCCTTCGAAGAC
GATGTCAGGCAGTTCATTGCGGCCTTCCTTTACGCCTATCTTCAGAAAGCAGACGTAATCGTCTTGCCGCGCGGTCTGCC
TGACCCGAAACACAGCATCGTTGATCCGAAGAACGAGCTGAAGGCCGACCTGGAATTGTGGAAAAACCAGGATGCCGCCA
ATCTGTTCACGCGCATTGCCCTTGCTGATCAGGGTGGGCCTGAACTGGAGCCGAAGGCTGCGCAGAAAGGCTCCAATCCG
GATCGCCCATGGCATGTCCTCAAACAACTCATCCTCGCGATCAGCCGGCACATCCCGATCGTCTGCGCCGCAGGAAACAG
TGGCGAGAGCCAGCTGATCTATCCGGCAAATCTTGCCGCCGACAACAACGGCGTCATTGCAGTTGGAGCCGTTACCGTCG
AAGGTTTCCGTTCGGGCTACAGTAATTACGGCGAAGGATTGACGGTTGTCTCCCCCTCCGACGACGGGGAGGTCTTCAAC
AGGCATCAGTTGCGCCTCGACCGGCTTTCTCCATTTGCCGCGCAGCACGACTACAGCGCATTTCGAACGCGGGAATACTG
CTATTCGCACTTCTCGCTGCTGACGACCGACCTATCGGGGATTTTCGGCTATGATCATGGCTCCGATCCGTGGTCGGCCG
TCGTGCCGTTCGGAACCAATCCCGGCATCGGGGGCGGATACTACACCACCTTCGGAGGCACATCAGGCGCGGCGGCGCAG
GTGGGCGGGCTATGTGCCCTGATACAGCGGGCCTACAAAAGCCGCCACAATCTGGGTGACCGCCTCTCCGGGCCCCAAGT
GAAATCGATTCTGAAGACCGCATCCCGCCTGGACGCCATTGTCGCGCCCGGAACGAGGAAATTGACGGCGGATTGCATGA
ACGCCGAAAGCGAGGACGCCGTCGAGATGGCCTATTTCTTTGGATCAGGCCTGCCAAATGCGCGGGCGGCGGTACAGGCA
GCTCTGGCCATCTGA

Upstream 100 bases:

>100_bases
CTTCGCTCCCTACCTCCACGACGCGTTCGGGCCTCTGTTCCAGGCCGTACACGACGAATGGGTCTGAATTCTCCAACCGC
TGCTCAATAGGGTTACAACC

Downstream 100 bases:

>100_bases
AGCCCGGGGATGCTTTTCGAAAGATTCCAAGCCTCCTCTATCGAGGGGGCTTTTTCTTTGTTTACGACCTTTTTACGGAT
TTTTAACGCGGTACTGGCGG

Product: putative peptidase

Products: NA

Alternate protein names: Peptidase S8/S53 Subtilisin Kexin Sedolisin

Number of amino acids: Translated: 564; Mature: 563

Protein sequence:

>564_residues
MTDQTKMPEPAPINYYYLWHLTALGVVDAEYGSAPPMPPAPDASAARALPDPLITGTVWDAIVSAGPLRPARVALIDVGV
SPDHPNLATRLDREASIDLTTHRYGARVLEILDTTTSFDREERHAFFAGLDIAPLGNMGLSNDDRDYLGDLVAEYAASEG
VLRRLYNPESLFASHGTCCAGLIVGEPAVVAEEGTPSLPPEGAFYGNGDELRTSGNRNVIPYFGVDPFSRLISIRTSFED
DVRQFIAAFLYAYLQKADVIVLPRGLPDPKHSIVDPKNELKADLELWKNQDAANLFTRIALADQGGPELEPKAAQKGSNP
DRPWHVLKQLILAISRHIPIVCAAGNSGESQLIYPANLAADNNGVIAVGAVTVEGFRSGYSNYGEGLTVVSPSDDGEVFN
RHQLRLDRLSPFAAQHDYSAFRTREYCYSHFSLLTTDLSGIFGYDHGSDPWSAVVPFGTNPGIGGGYYTTFGGTSGAAAQ
VGGLCALIQRAYKSRHNLGDRLSGPQVKSILKTASRLDAIVAPGTRKLTADCMNAESEDAVEMAYFFGSGLPNARAAVQA
ALAI

Sequences:

>Translated_564_residues
MTDQTKMPEPAPINYYYLWHLTALGVVDAEYGSAPPMPPAPDASAARALPDPLITGTVWDAIVSAGPLRPARVALIDVGV
SPDHPNLATRLDREASIDLTTHRYGARVLEILDTTTSFDREERHAFFAGLDIAPLGNMGLSNDDRDYLGDLVAEYAASEG
VLRRLYNPESLFASHGTCCAGLIVGEPAVVAEEGTPSLPPEGAFYGNGDELRTSGNRNVIPYFGVDPFSRLISIRTSFED
DVRQFIAAFLYAYLQKADVIVLPRGLPDPKHSIVDPKNELKADLELWKNQDAANLFTRIALADQGGPELEPKAAQKGSNP
DRPWHVLKQLILAISRHIPIVCAAGNSGESQLIYPANLAADNNGVIAVGAVTVEGFRSGYSNYGEGLTVVSPSDDGEVFN
RHQLRLDRLSPFAAQHDYSAFRTREYCYSHFSLLTTDLSGIFGYDHGSDPWSAVVPFGTNPGIGGGYYTTFGGTSGAAAQ
VGGLCALIQRAYKSRHNLGDRLSGPQVKSILKTASRLDAIVAPGTRKLTADCMNAESEDAVEMAYFFGSGLPNARAAVQA
ALAI
>Mature_563_residues
TDQTKMPEPAPINYYYLWHLTALGVVDAEYGSAPPMPPAPDASAARALPDPLITGTVWDAIVSAGPLRPARVALIDVGVS
PDHPNLATRLDREASIDLTTHRYGARVLEILDTTTSFDREERHAFFAGLDIAPLGNMGLSNDDRDYLGDLVAEYAASEGV
LRRLYNPESLFASHGTCCAGLIVGEPAVVAEEGTPSLPPEGAFYGNGDELRTSGNRNVIPYFGVDPFSRLISIRTSFEDD
VRQFIAAFLYAYLQKADVIVLPRGLPDPKHSIVDPKNELKADLELWKNQDAANLFTRIALADQGGPELEPKAAQKGSNPD
RPWHVLKQLILAISRHIPIVCAAGNSGESQLIYPANLAADNNGVIAVGAVTVEGFRSGYSNYGEGLTVVSPSDDGEVFNR
HQLRLDRLSPFAAQHDYSAFRTREYCYSHFSLLTTDLSGIFGYDHGSDPWSAVVPFGTNPGIGGGYYTTFGGTSGAAAQV
GGLCALIQRAYKSRHNLGDRLSGPQVKSILKTASRLDAIVAPGTRKLTADCMNAESEDAVEMAYFFGSGLPNARAAVQAA
LAI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60598; Mature: 60466

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: PS00137 SUBTILASE_HIS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDQTKMPEPAPINYYYLWHLTALGVVDAEYGSAPPMPPAPDASAARALPDPLITGTVWD
CCCCCCCCCCCCCCEEEEEEEHHHHEEECCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHH
AIVSAGPLRPARVALIDVGVSPDHPNLATRLDREASIDLTTHRYGARVLEILDTTTSFDR
HHHHCCCCCCCEEEEEEECCCCCCCCHHHHCCCCCCEEEEHHHHHHHHHHHHHHHCCCCH
EERHAFFAGLDIAPLGNMGLSNDDRDYLGDLVAEYAASEGVLRRLYNPESLFASHGTCCA
HHHHEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCEEE
GLIVGEPAVVAEEGTPSLPPEGAFYGNGDELRTSGNRNVIPYFGVDPFSRLISIRTSFED
EEEECCCEEEECCCCCCCCCCCCCCCCCCHHEECCCCCEEEEECCCHHHHHHHHHCCHHH
DVRQFIAAFLYAYLQKADVIVLPRGLPDPKHSIVDPKNELKADLELWKNQDAANLFTRIA
HHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHH
LADQGGPELEPKAAQKGSNPDRPWHVLKQLILAISRHIPIVCAAGNSGESQLIYPANLAA
CCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEECCCCC
DNNGVIAVGAVTVEGFRSGYSNYGEGLTVVSPSDDGEVFNRHQLRLDRLSPFAAQHDYSA
CCCCEEEEEEEEHHHHHHCHHHHCCCEEEECCCCCCHHHHHHHHHHHHCCCHHHHCCHHH
FRTREYCYSHFSLLTTDLSGIFGYDHGSDPWSAVVPFGTNPGIGGGYYTTFGGTSGAAAQ
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCEEEECCCCCCCHHH
VGGLCALIQRAYKSRHNLGDRLSGPQVKSILKTASRLDAIVAPGTRKLTADCMNAESEDA
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHEECCCCCHHHHHHHCCCCCHH
VEMAYFFGSGLPNARAAVQAALAI
HHHHHHHCCCCCCHHHHHHHHHCC
>Mature Secondary Structure 
TDQTKMPEPAPINYYYLWHLTALGVVDAEYGSAPPMPPAPDASAARALPDPLITGTVWD
CCCCCCCCCCCCCEEEEEEEHHHHEEECCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHH
AIVSAGPLRPARVALIDVGVSPDHPNLATRLDREASIDLTTHRYGARVLEILDTTTSFDR
HHHHCCCCCCCEEEEEEECCCCCCCCHHHHCCCCCCEEEEHHHHHHHHHHHHHHHCCCCH
EERHAFFAGLDIAPLGNMGLSNDDRDYLGDLVAEYAASEGVLRRLYNPESLFASHGTCCA
HHHHEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCEEE
GLIVGEPAVVAEEGTPSLPPEGAFYGNGDELRTSGNRNVIPYFGVDPFSRLISIRTSFED
EEEECCCEEEECCCCCCCCCCCCCCCCCCHHEECCCCCEEEEECCCHHHHHHHHHCCHHH
DVRQFIAAFLYAYLQKADVIVLPRGLPDPKHSIVDPKNELKADLELWKNQDAANLFTRIA
HHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHH
LADQGGPELEPKAAQKGSNPDRPWHVLKQLILAISRHIPIVCAAGNSGESQLIYPANLAA
CCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEECCCCC
DNNGVIAVGAVTVEGFRSGYSNYGEGLTVVSPSDDGEVFNRHQLRLDRLSPFAAQHDYSA
CCCCEEEEEEEEHHHHHHCHHHHCCCEEEECCCCCCHHHHHHHHHHHHCCCHHHHCCHHH
FRTREYCYSHFSLLTTDLSGIFGYDHGSDPWSAVVPFGTNPGIGGGYYTTFGGTSGAAAQ
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCEEEECCCCCCCHHH
VGGLCALIQRAYKSRHNLGDRLSGPQVKSILKTASRLDAIVAPGTRKLTADCMNAESEDA
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHEECCCCCHHHHHHHCCCCCHH
VEMAYFFGSGLPNARAAVQAALAI
HHHHHHHCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA