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The map label for this gene is ytfH [C]

Identifier: 116249215

GI number: 116249215

Start: 598051

End: 598431

Strand: Direct

Name: ytfH [C]

Synonym: pRL120551

Alternate gene names: 116249215

Gene position: 598051-598431 (Clockwise)

Preceding gene: 116249212

Following gene: 116249217

Centisome position: 68.74

GC content: 57.48

Gene sequence:

>381_bases
ATGGAAAACCAGACTATGGCCGATGGCGAAATCAATATGCATGAGGAGATGCGCCGCGCATTCGCGTTGCTCTCCGGCAA
ATGGAAGCTGGAAATCATGTGGCTGCTCCATCAGCGGATCCACCGGTTTGGCGAACTGAGAAAGGCTATTCCCGGCATCA
CCCAACACATGCTGACGGCGCAACTCCGCGAGCTCGAAGCAGACGGACTCGTGTCCCGCACCATCTTTGCGGAGGTTCCT
CCGCGCGTCGAATATGAGATCACGCAAAAAGCGCGGGGCCTCGGTCCCACCATGGAAGCCTTGACGGCATGGTGGAATGA
GTACGGAAAGAGTGTGCCAGTGAAACCGAGCACACGCGGTCGGAAAGCGAGAGATGGCTGA

Upstream 100 bases:

>100_bases
CTATGTGAGAGGCGCTCCTTTTACTGCGCCCTTGATGCACGGACGGAAAATGTCGTCTAAGGTCTATCTTTGCAAGTAGG
ATGAATTACTTGCAGCTAGT

Downstream 100 bases:

>100_bases
GCTGCCTGTGGGTCGATTGCTATCCCTGCCGCAACCGCTTTAGCTATCGCTTCATGCGAATGATCGGAATGATCACATTG
GCGCGTCAGCCGATGACAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 126; Mature: 126

Protein sequence:

>126_residues
MENQTMADGEINMHEEMRRAFALLSGKWKLEIMWLLHQRIHRFGELRKAIPGITQHMLTAQLRELEADGLVSRTIFAEVP
PRVEYEITQKARGLGPTMEALTAWWNEYGKSVPVKPSTRGRKARDG

Sequences:

>Translated_126_residues
MENQTMADGEINMHEEMRRAFALLSGKWKLEIMWLLHQRIHRFGELRKAIPGITQHMLTAQLRELEADGLVSRTIFAEVP
PRVEYEITQKARGLGPTMEALTAWWNEYGKSVPVKPSTRGRKARDG
>Mature_126_residues
MENQTMADGEINMHEEMRRAFALLSGKWKLEIMWLLHQRIHRFGELRKAIPGITQHMLTAQLRELEADGLVSRTIFAEVP
PRVEYEITQKARGLGPTMEALTAWWNEYGKSVPVKPSTRGRKARDG

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082391, Length=87, Percent_Identity=33.3333333333333, Blast_Score=62, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 14514; Mature: 14514

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENQTMADGEINMHEEMRRAFALLSGKWKLEIMWLLHQRIHRFGELRKAIPGITQHMLTA
CCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
QLRELEADGLVSRTIFAEVPPRVEYEITQKARGLGPTMEALTAWWNEYGKSVPVKPSTRG
HHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCC
RKARDG
CCCCCC
>Mature Secondary Structure
MENQTMADGEINMHEEMRRAFALLSGKWKLEIMWLLHQRIHRFGELRKAIPGITQHMLTA
CCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
QLRELEADGLVSRTIFAEVPPRVEYEITQKARGLGPTMEALTAWWNEYGKSVPVKPSTRG
HHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCC
RKARDG
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]