| Definition | Rhizobium leguminosarum bv. viciae 3841 plasmid pRL12, complete sequence. |
|---|---|
| Accession | NC_008378 |
| Length | 870,021 |
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The map label for this gene is 116249206
Identifier: 116249206
GI number: 116249206
Start: 590036
End: 591073
Strand: Direct
Name: 116249206
Synonym: pRL120542
Alternate gene names: NA
Gene position: 590036-591073 (Clockwise)
Preceding gene: 116249203
Following gene: 116249208
Centisome position: 67.82
GC content: 59.83
Gene sequence:
>1038_bases ATGGCACAAAGCCTGGTCTTGGACGGTGAAAGTCTTGTTGCGCCCGGCGAAATTCGTCGGGTGGCAAGGAGGGTTGCCGC CCCAGATCCCGGCCACCTGATCGTTGCCAGAGCCGAGCTCGCCCTCAGCCTTGACGTGTCGATCCGTCAGTTCAAGTCCG GCGTCGAGCCCAATGCGATCATCGAGCGTCTTGCCGAGGCCTTGCACCAGATACGGCGGCGCTTTCATCCGGAGGTGTGG GACGTCATCGTTCCGATCGCGCAATCCCATCCCGTTGCTCACTATCTTCATCAAGATCCATTGACCCGCTGGTCGTTTGA AAAACCGCGCGGCTATTCTGGCGACGCACGCCTTCTCGACTTCATATACGGCCGACCTGAAATCGAGGACGCCGTCTTGT CATCGAGCAACTTGGGACGTTCGATCTACGCCTACACTCGAAATGCTTCGTCATCCGTCGCGGTAAGGGAGCGTCGAGAC ATTCTGGCTCGCCGCGTTGACGAAATCGCTTCGGCCCGGCCTGGTTCCGCCGAAGTCCTCGCCATTGCTGCCGGGCATCT TCGCGAGGGGCCGTTGTCGCGCGCTCTCAGCGCCGGGACGATCAGACGCTGGGTGGCTTTGGATCAAGACCCGATAAGCG TTGGAACCGTCGCCCGCGATTTCGCCGGCACGTCCGTCGAGGCGGTGAACGGGTCGGTCAAATCCCTGCTCGGTGGAAGG CATGCGCTGGGAATGTTCGATTTCGTCTATGCCGCGGGTCTCTACGACTATTTGCCGGACGCGGTAGCCGTCAGGCTGGC CAGGAAGTGCGTCAGCATGCTGAAGCCTGGCGGCACATTCCTCTTCGCCAACTTCTCCCCGGAGACGGACGTCGATGGCT ATATGGAGACCTTTATGAACTGGGCGTTGCTGTTGCGGTCAGAACGAGAGATGGGCTTGATCGCCAGTGAAAGCGTGACC GGGGCGGATGTGAAGGTGTCTGTTTGGCCCGGCTCAAACCGCAGCATTGTCTACTGTGAAATTCAAAAACCGGAGTAG
Upstream 100 bases:
>100_bases CTGACCCGCAAGAGTAGAATTACCCTTATCCCGTGTGGATTCTAGTCGCATCCTATTTCGAGGTTGATTATGCTTAACGC TATATCAAGGGGATCTCGAA
Downstream 100 bases:
>100_bases GCCGCACGTCTGCCGTCCGATCCGGTAGTCTTTGGGTAGTCCGTTAGTTCAAAATCCGGGGGCGACCCTGTCAGAGGCTG CATGAGAAAGGGCGTGGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: Methyltransferase Protein; Methyltransferase; MCP Methyltransferase CheR-Type; Regulatory Protein
Number of amino acids: Translated: 345; Mature: 344
Protein sequence:
>345_residues MAQSLVLDGESLVAPGEIRRVARRVAAPDPGHLIVARAELALSLDVSIRQFKSGVEPNAIIERLAEALHQIRRRFHPEVW DVIVPIAQSHPVAHYLHQDPLTRWSFEKPRGYSGDARLLDFIYGRPEIEDAVLSSSNLGRSIYAYTRNASSSVAVRERRD ILARRVDEIASARPGSAEVLAIAAGHLREGPLSRALSAGTIRRWVALDQDPISVGTVARDFAGTSVEAVNGSVKSLLGGR HALGMFDFVYAAGLYDYLPDAVAVRLARKCVSMLKPGGTFLFANFSPETDVDGYMETFMNWALLLRSEREMGLIASESVT GADVKVSVWPGSNRSIVYCEIQKPE
Sequences:
>Translated_345_residues MAQSLVLDGESLVAPGEIRRVARRVAAPDPGHLIVARAELALSLDVSIRQFKSGVEPNAIIERLAEALHQIRRRFHPEVW DVIVPIAQSHPVAHYLHQDPLTRWSFEKPRGYSGDARLLDFIYGRPEIEDAVLSSSNLGRSIYAYTRNASSSVAVRERRD ILARRVDEIASARPGSAEVLAIAAGHLREGPLSRALSAGTIRRWVALDQDPISVGTVARDFAGTSVEAVNGSVKSLLGGR HALGMFDFVYAAGLYDYLPDAVAVRLARKCVSMLKPGGTFLFANFSPETDVDGYMETFMNWALLLRSEREMGLIASESVT GADVKVSVWPGSNRSIVYCEIQKPE >Mature_344_residues AQSLVLDGESLVAPGEIRRVARRVAAPDPGHLIVARAELALSLDVSIRQFKSGVEPNAIIERLAEALHQIRRRFHPEVWD VIVPIAQSHPVAHYLHQDPLTRWSFEKPRGYSGDARLLDFIYGRPEIEDAVLSSSNLGRSIYAYTRNASSSVAVRERRDI LARRVDEIASARPGSAEVLAIAAGHLREGPLSRALSAGTIRRWVALDQDPISVGTVARDFAGTSVEAVNGSVKSLLGGRH ALGMFDFVYAAGLYDYLPDAVAVRLARKCVSMLKPGGTFLFANFSPETDVDGYMETFMNWALLLRSEREMGLIASESVTG ADVKVSVWPGSNRSIVYCEIQKPE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37820; Mature: 37688
Theoretical pI: Translated: 7.27; Mature: 7.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQSLVLDGESLVAPGEIRRVARRVAAPDPGHLIVARAELALSLDVSIRQFKSGVEPNAI CCCCEEECCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEEEEEEECHHHHHHHCCCCHHHH IERLAEALHQIRRRFHPEVWDVIVPIAQSHPVAHYLHQDPLTRWSFEKPRGYSGDARLLD HHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHH FIYGRPEIEDAVLSSSNLGRSIYAYTRNASSSVAVRERRDILARRVDEIASARPGSAEVL HHCCCCCHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEE AIAAGHLREGPLSRALSAGTIRRWVALDQDPISVGTVARDFAGTSVEAVNGSVKSLLGGR EEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHCCHHHHHHCCH HALGMFDFVYAAGLYDYLPDAVAVRLARKCVSMLKPGGTFLFANFSPETDVDGYMETFMN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHH WALLLRSEREMGLIASESVTGADVKVSVWPGSNRSIVYCEIQKPE HHHHHHCCCCCCEEECCCCCCCEEEEEEECCCCCEEEEEEECCCC >Mature Secondary Structure AQSLVLDGESLVAPGEIRRVARRVAAPDPGHLIVARAELALSLDVSIRQFKSGVEPNAI CCCEEECCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEEEEEEECHHHHHHHCCCCHHHH IERLAEALHQIRRRFHPEVWDVIVPIAQSHPVAHYLHQDPLTRWSFEKPRGYSGDARLLD HHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHH FIYGRPEIEDAVLSSSNLGRSIYAYTRNASSSVAVRERRDILARRVDEIASARPGSAEVL HHCCCCCHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEE AIAAGHLREGPLSRALSAGTIRRWVALDQDPISVGTVARDFAGTSVEAVNGSVKSLLGGR EEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHCCHHHHHHCCH HALGMFDFVYAAGLYDYLPDAVAVRLARKCVSMLKPGGTFLFANFSPETDVDGYMETFMN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHH WALLLRSEREMGLIASESVTGADVKVSVWPGSNRSIVYCEIQKPE HHHHHHCCCCCCEEECCCCCCCEEEEEEECCCCCEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA