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The map label for this gene is impE

Identifier: 116249136

GI number: 116249136

Start: 509440

End: 510270

Strand: Reverse

Name: impE

Synonym: pRL120471

Alternate gene names: NA

Gene position: 510270-509440 (Counterclockwise)

Preceding gene: 116249137

Following gene: 116249135

Centisome position: 58.65

GC content: 65.1

Gene sequence:

>831_bases
ATGACGCTTTCCGCCAGCATCGCCCAATCGCTCAGCGACAATGCCCTCGATGACGCGATCGAGGAGGTCAAGGCGCATCT
GAAGGTCAAGCCCTCGGATCAGGAGGCGCGGCATCTCTATATCGATCTTCTCGTGCTTGCCGGCGATTACCAGCGGGCGG
ACAATCAGTGCAGCCTTGCTGCCACCCTCTCACCCGACGCGACGATGGGTTTCGCCTTGCTGCGCAACGAGCTTCGGGCG
ATGGCGGCGCGCGACGCCTGGTTTACGAGCGGCGCCCTGCCGGAATTTCCGCAGGGGCCGAGCGAGCTCGACAAGCTCGC
CGTCCGCCTCGGTATCGCCCATCGCGACGACAATCCGGATGAGGCGAGGACGACGCTCGATGCGCTCGAGAAGCTGAGGG
GCGAACGTCCGCTGATCTGGAACGGCAGGGCCGTCTCCGATTTCCGCGATCTCGACGACCGGACACCGCATGCCCTGGAA
GTTATCATGACCGGCGGCGGCTATCTCTGGATCGATTTTTCCAAGATCGCAGCCCTCACGATAGAGCCGATTGCCCGTCC
GCGCGATCTGGCCTTCCGCCGCGCCGAGCTTTCCCTGATCGACGGCGCGGCCGCGTCGGTGCTTCTGCCGGCGGTTTATC
ATGGCACCGGCAAGGATGCGGCGCTCAGGCTCGGCCGCGAGACCGAGTGGATCGAGGAGCCGACCGGCATCACCAGCGGC
CGCGGCCAGCGCTGCTACCTCGCCGGCGACGAAATGGTTTCCTTCCATGACACCCAAAGTCTGGAGATCGTGCCGGCAAC
GGCTGCCGGCAGGCAGGTCGCGCATGGTTGA

Upstream 100 bases:

>100_bases
AGCTCGACGACGTTGCCACGAGCTTCCATCTCATCGCTGAGACCGCGACCACGGGCCAGATTTTGAGCCGCCCAGTTGCC
ATACCCGAGAGGATGTCCGC

Downstream 100 bases:

>100_bases
CCCCCTCGAACGCTACCGGCTGCGCGACCGCGTCCTTGCCCGCTCGATCCTCGACAGGTTGATCGACGAGGCTCCGGATC
GCACCGTCGATCCGCCGATA

Product: putative virulence-island/protein involved in nitrogen fixation

Products: NA

Alternate protein names: Type VI Secretion System Protein ImpE; SciE Type Virulence Protein; Avirulence Locus Protein; Virulence-Island/Protein Involved In Nitrogen Fixation; Virulence Protein SciE Type Family Protein; Secretion Protein; Cytoplasmic Protein SciE; Protein Of Avirulence Locus ImpE

Number of amino acids: Translated: 276; Mature: 275

Protein sequence:

>276_residues
MTLSASIAQSLSDNALDDAIEEVKAHLKVKPSDQEARHLYIDLLVLAGDYQRADNQCSLAATLSPDATMGFALLRNELRA
MAARDAWFTSGALPEFPQGPSELDKLAVRLGIAHRDDNPDEARTTLDALEKLRGERPLIWNGRAVSDFRDLDDRTPHALE
VIMTGGGYLWIDFSKIAALTIEPIARPRDLAFRRAELSLIDGAAASVLLPAVYHGTGKDAALRLGRETEWIEEPTGITSG
RGQRCYLAGDEMVSFHDTQSLEIVPATAAGRQVAHG

Sequences:

>Translated_276_residues
MTLSASIAQSLSDNALDDAIEEVKAHLKVKPSDQEARHLYIDLLVLAGDYQRADNQCSLAATLSPDATMGFALLRNELRA
MAARDAWFTSGALPEFPQGPSELDKLAVRLGIAHRDDNPDEARTTLDALEKLRGERPLIWNGRAVSDFRDLDDRTPHALE
VIMTGGGYLWIDFSKIAALTIEPIARPRDLAFRRAELSLIDGAAASVLLPAVYHGTGKDAALRLGRETEWIEEPTGITSG
RGQRCYLAGDEMVSFHDTQSLEIVPATAAGRQVAHG
>Mature_275_residues
TLSASIAQSLSDNALDDAIEEVKAHLKVKPSDQEARHLYIDLLVLAGDYQRADNQCSLAATLSPDATMGFALLRNELRAM
AARDAWFTSGALPEFPQGPSELDKLAVRLGIAHRDDNPDEARTTLDALEKLRGERPLIWNGRAVSDFRDLDDRTPHALEV
IMTGGGYLWIDFSKIAALTIEPIARPRDLAFRRAELSLIDGAAASVLLPAVYHGTGKDAALRLGRETEWIEEPTGITSGR
GQRCYLAGDEMVSFHDTQSLEIVPATAAGRQVAHG

Specific function: Unknown

COG id: COG4455

COG function: function code R; Protein of avirulence locus involved in temperature-dependent protein secretion

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30054; Mature: 29923

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLSASIAQSLSDNALDDAIEEVKAHLKVKPSDQEARHLYIDLLVLAGDYQRADNQCSLA
CCCCHHHHHHHCCHHHHHHHHHHHHHEECCCCCHHHHEEEEEEEEEECCCCCCCCCEEEE
ATLSPDATMGFALLRNELRAMAARDAWFTSGALPEFPQGPSELDKLAVRLGIAHRDDNPD
EECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHH
EARTTLDALEKLRGERPLIWNGRAVSDFRDLDDRTPHALEVIMTGGGYLWIDFSKIAALT
HHHHHHHHHHHHCCCCCEEECCCCHHHHHHCCCCCCCEEEEEEECCCEEEEEHHHEEEEE
IEPIARPRDLAFRRAELSLIDGAAASVLLPAVYHGTGKDAALRLGRETEWIEEPTGITSG
ECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHCCCCCCHHHCCCCCCCCC
RGQRCYLAGDEMVSFHDTQSLEIVPATAAGRQVAHG
CCCEEEEECCCEEEECCCCCEEEEECCCCCCCCCCC
>Mature Secondary Structure 
TLSASIAQSLSDNALDDAIEEVKAHLKVKPSDQEARHLYIDLLVLAGDYQRADNQCSLA
CCCHHHHHHHCCHHHHHHHHHHHHHEECCCCCHHHHEEEEEEEEEECCCCCCCCCEEEE
ATLSPDATMGFALLRNELRAMAARDAWFTSGALPEFPQGPSELDKLAVRLGIAHRDDNPD
EECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHH
EARTTLDALEKLRGERPLIWNGRAVSDFRDLDDRTPHALEVIMTGGGYLWIDFSKIAALT
HHHHHHHHHHHHCCCCCEEECCCCHHHHHHCCCCCCCEEEEEEECCCEEEEEHHHEEEEE
IEPIARPRDLAFRRAELSLIDGAAASVLLPAVYHGTGKDAALRLGRETEWIEEPTGITSG
ECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHCCCCCCHHHCCCCCCCCC
RGQRCYLAGDEMVSFHDTQSLEIVPATAAGRQVAHG
CCCEEEEECCCEEEECCCCCEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA