| Definition | Rhizobium leguminosarum bv. viciae 3841 plasmid pRL12, complete sequence. |
|---|---|
| Accession | NC_008378 |
| Length | 870,021 |
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The map label for this gene is 116249119
Identifier: 116249119
GI number: 116249119
Start: 490221
End: 490511
Strand: Reverse
Name: 116249119
Synonym: pRL120454
Alternate gene names: NA
Gene position: 490511-490221 (Counterclockwise)
Preceding gene: 116249120
Following gene: 116249118
Centisome position: 56.38
GC content: 62.89
Gene sequence:
>291_bases ATGAAAATCTATCTCTTGTCCCTCGGTGCCGGTCTGCTGGTGGGCGTGATCTACAGCCTGCTCAATGTCCGTTCGCCCGC CCCGCCCGTTGTCGCTCTCATAGGTCTGCTCGGCATCCTCGTTGGTGAGCAGCTGGTGCCCCTGGCAAAAAGCATCTGGG CGCGCGAGCCTGCCGCCGTCTCCTGGCTTCACCAGGTCAAGCCGCACATGTTCGGGCACCTCCCGAAGGGCGGGACCAAC ATGGTGGCGGTGAACCCGCCCCGCGAAGATCCGACATCGAGGAAAAGCTGA
Upstream 100 bases:
>100_bases AGCGGATCGGCCCGAACCCCGCGAAGTAAAACCGTCATCACTCCGGCAGGCCGCCGCCTGCCGGAGTGAACTCTTTCTCC CCAAGCGAAGGTGATCCGCG
Downstream 100 bases:
>100_bases TGGCCACGCGCCGCACATTCCTGGGCGCAGCATCGAGCCTCGCCTTTTCAAACTTGTTTTCACCGGCCAATGCCGCCGAT CCTATCAAGACCGGAGCCGC
Product: putative transmembrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 96; Mature: 96
Protein sequence:
>96_residues MKIYLLSLGAGLLVGVIYSLLNVRSPAPPVVALIGLLGILVGEQLVPLAKSIWAREPAAVSWLHQVKPHMFGHLPKGGTN MVAVNPPREDPTSRKS
Sequences:
>Translated_96_residues MKIYLLSLGAGLLVGVIYSLLNVRSPAPPVVALIGLLGILVGEQLVPLAKSIWAREPAAVSWLHQVKPHMFGHLPKGGTN MVAVNPPREDPTSRKS >Mature_96_residues MKIYLLSLGAGLLVGVIYSLLNVRSPAPPVVALIGLLGILVGEQLVPLAKSIWAREPAAVSWLHQVKPHMFGHLPKGGTN MVAVNPPREDPTSRKS
Specific function: Unknown
COG id: COG4317
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10254; Mature: 10254
Theoretical pI: Translated: 10.74; Mature: 10.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIYLLSLGAGLLVGVIYSLLNVRSPAPPVVALIGLLGILVGEQLVPLAKSIWAREPAAV CEEEEEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH SWLHQVKPHMFGHLPKGGTNMVAVNPPREDPTSRKS HHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCC >Mature Secondary Structure MKIYLLSLGAGLLVGVIYSLLNVRSPAPPVVALIGLLGILVGEQLVPLAKSIWAREPAAV CEEEEEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH SWLHQVKPHMFGHLPKGGTNMVAVNPPREDPTSRKS HHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA