| Definition | Rhizobium leguminosarum bv. viciae 3841 plasmid pRL12, complete sequence. |
|---|---|
| Accession | NC_008378 |
| Length | 870,021 |
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The map label for this gene is 116249088
Identifier: 116249088
GI number: 116249088
Start: 456912
End: 457769
Strand: Direct
Name: 116249088
Synonym: pRL120422
Alternate gene names: NA
Gene position: 456912-457769 (Clockwise)
Preceding gene: 116249086
Following gene: 116249092
Centisome position: 52.52
GC content: 63.75
Gene sequence:
>858_bases TTGAATCTCCTGCGTCGCGCGCTCTTGGCGTCCATCGGGGCGATGATCGGCTGGAAACCGTCATCGGCCAAGGAAATCAG CCCGGCTTCCGGCGAGGAAACGGTGACCCAAAACGAGGCGGAGGAATCGTCGGTGACGCCCCGGCATGTCTTATGTTTCC TCGGCAAGGGACGTGACCTCAGCCCCTTGTCCGAAGCGGCATCGCAGGCGATCCGTGACTTCGCCACCGGCTTCAGCATC GACGGGGACTATTCCCAGGCCGAGCCTGATGACCGTATGAGCCAGTCATTCGCCGTGTGCTGGGATCGGGTCGAAGCCGA TGCGTGGAGCCCGGCAGACGAGGAGGCCGTCGCCGATCATCAGTCGGTCCTCTATGTCCTCGGGCCGAGCATGGCGCAGG CGGGGACGGTGAAGGTTTCGATGCTGGCGCTGCGCCTCGTTGAACGGCTGATCGGTGCGGGAGCGGTTGCGGTAAAGGGC GAAAGCGCCGGCATTGCCCATGGCCTCGACCGATGGAGCGAGCTGATCGGGCAAGGCGCCGAGGCGGTAAAGGCCGCCGA CCCGCTGACCCAGCAACGGATCGGCCGGCTGGCCTTTGCGAAGCGGCCGCTATCGGTTCCGGGATACCTGGAGAGCGTCG GTTTCCATCTCGTCGGATTGCCGGAGGTCTATGTGCCTGAGACGGCCGGCAGCGAAAGGCAGATCGTCGCCATCATGGAT GCGGTTGCCGACGAGATCGCGCAGCAGGGCCTCGAGCCGACGCTCAAGGAGCGCCGTGCAAGCCTCTCCTTCGATTCGAC TTACGAACCGGATGAGTTCAAGTTCAACCCATACGGCATAGTCAAGCTGCCCAAGTGA
Upstream 100 bases:
>100_bases TTGCGCGCTGGCGGATGCCTGATCCTGCTTTTGTTTCGGATTTCATCCGGTTACAAGGCGAGGAGGCTGCGAACATTCGA CCGAACGGAAGGCATCGATC
Downstream 100 bases:
>100_bases GCCTGGGCTGTCGTCCCGCAGGGCTTCGATTTCCGGTTTAGTTGTAAGTGATCGTGTCGCCGACCCTCGGGCGATTGAAG TAATGGCGATCGAAGCTGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 285; Mature: 285
Protein sequence:
>285_residues MNLLRRALLASIGAMIGWKPSSAKEISPASGEETVTQNEAEESSVTPRHVLCFLGKGRDLSPLSEAASQAIRDFATGFSI DGDYSQAEPDDRMSQSFAVCWDRVEADAWSPADEEAVADHQSVLYVLGPSMAQAGTVKVSMLALRLVERLIGAGAVAVKG ESAGIAHGLDRWSELIGQGAEAVKAADPLTQQRIGRLAFAKRPLSVPGYLESVGFHLVGLPEVYVPETAGSERQIVAIMD AVADEIAQQGLEPTLKERRASLSFDSTYEPDEFKFNPYGIVKLPK
Sequences:
>Translated_285_residues MNLLRRALLASIGAMIGWKPSSAKEISPASGEETVTQNEAEESSVTPRHVLCFLGKGRDLSPLSEAASQAIRDFATGFSI DGDYSQAEPDDRMSQSFAVCWDRVEADAWSPADEEAVADHQSVLYVLGPSMAQAGTVKVSMLALRLVERLIGAGAVAVKG ESAGIAHGLDRWSELIGQGAEAVKAADPLTQQRIGRLAFAKRPLSVPGYLESVGFHLVGLPEVYVPETAGSERQIVAIMD AVADEIAQQGLEPTLKERRASLSFDSTYEPDEFKFNPYGIVKLPK >Mature_285_residues MNLLRRALLASIGAMIGWKPSSAKEISPASGEETVTQNEAEESSVTPRHVLCFLGKGRDLSPLSEAASQAIRDFATGFSI DGDYSQAEPDDRMSQSFAVCWDRVEADAWSPADEEAVADHQSVLYVLGPSMAQAGTVKVSMLALRLVERLIGAGAVAVKG ESAGIAHGLDRWSELIGQGAEAVKAADPLTQQRIGRLAFAKRPLSVPGYLESVGFHLVGLPEVYVPETAGSERQIVAIMD AVADEIAQQGLEPTLKERRASLSFDSTYEPDEFKFNPYGIVKLPK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30602; Mature: 30602
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLLRRALLASIGAMIGWKPSSAKEISPASGEETVTQNEAEESSVTPRHVLCFLGKGRDL CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCHHHCCCHHHEEEEECCCCCC SPLSEAASQAIRDFATGFSIDGDYSQAEPDDRMSQSFAVCWDRVEADAWSPADEEAVADH CHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH QSVLYVLGPSMAQAGTVKVSMLALRLVERLIGAGAVAVKGESAGIAHGLDRWSELIGQGA HHEEEEECCCHHHCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHCCH EAVKAADPLTQQRIGRLAFAKRPLSVPGYLESVGFHLVGLPEVYVPETAGSERQIVAIMD HHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHCEEEECCCCEECCCCCCCCCHHHHHHH AVADEIAQQGLEPTLKERRASLSFDSTYEPDEFKFNPYGIVKLPK HHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCEEECCEEEEECCC >Mature Secondary Structure MNLLRRALLASIGAMIGWKPSSAKEISPASGEETVTQNEAEESSVTPRHVLCFLGKGRDL CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCHHHCCCHHHEEEEECCCCCC SPLSEAASQAIRDFATGFSIDGDYSQAEPDDRMSQSFAVCWDRVEADAWSPADEEAVADH CHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH QSVLYVLGPSMAQAGTVKVSMLALRLVERLIGAGAVAVKGESAGIAHGLDRWSELIGQGA HHEEEEECCCHHHCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHCCH EAVKAADPLTQQRIGRLAFAKRPLSVPGYLESVGFHLVGLPEVYVPETAGSERQIVAIMD HHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHCEEEECCCCEECCCCCCCCCHHHHHHH AVADEIAQQGLEPTLKERRASLSFDSTYEPDEFKFNPYGIVKLPK HHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCEEECCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA