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The map label for this gene is ybgC [C]

Identifier: 116249036

GI number: 116249036

Start: 395884

End: 396300

Strand: Direct

Name: ybgC [C]

Synonym: pRL120367

Alternate gene names: 116249036

Gene position: 395884-396300 (Clockwise)

Preceding gene: 116249031

Following gene: 116249037

Centisome position: 45.5

GC content: 58.99

Gene sequence:

>417_bases
ATGAGCGTTGATGACAGGCCTTTAGCATCGTTCCGGGTCTCGATGCGAGACATTGACATCTATGGTCATGTCCACAATTC
CCGTTATCTCGACTATTGCGAGGATGCGGTCGTCGAGTTCCTGCGGCAACGGCAAATTCTCAGCCATTTCCGTCACACCT
CCTCCGGCGTCGCCTATCACGTGAAAAAGGCGGAGATCACCTTTCACAGCCCGATCGACCTCGACGATGTCGTCGAGGCG
AAGGTGGACGTGGAGAAAATCGGGCGCACGAGCCTGTCCTTTGCCATAGAACTCTTTCGCCAGCGCGATGGCGCCCATTG
CGCATCGGCGCATTTCGTCTGGGTCTGCGTCGGCCTCTCCGACAGCCGCCCGACGCCGATCCCCGAAGCGACCAGAGCCG
CTCTGTCTCCAGGCTGA

Upstream 100 bases:

>100_bases
ACCTCCTGGGCCGGGCCGAATTTTCGCACGACCGCCTGATATTGCATTGCATCCCCCACACACTGCGGTTAGATCACCCC
GTCGAATTTTCGGTGATCGA

Downstream 100 bases:

>100_bases
CGGCCGATCATTCAAACCAGCGGGTGTCCATGCCGATCCATGCGCAGCTTCTTCGACATGCAACGGAGACACCGGACAAG
CCGGCGCTGGTGATCAACGG

Product: putative thioesterase protein

Products: NA

Alternate protein names: Thioesterase; Thioesterase Superfamily Protein

Number of amino acids: Translated: 138; Mature: 137

Protein sequence:

>138_residues
MSVDDRPLASFRVSMRDIDIYGHVHNSRYLDYCEDAVVEFLRQRQILSHFRHTSSGVAYHVKKAEITFHSPIDLDDVVEA
KVDVEKIGRTSLSFAIELFRQRDGAHCASAHFVWVCVGLSDSRPTPIPEATRAALSPG

Sequences:

>Translated_138_residues
MSVDDRPLASFRVSMRDIDIYGHVHNSRYLDYCEDAVVEFLRQRQILSHFRHTSSGVAYHVKKAEITFHSPIDLDDVVEA
KVDVEKIGRTSLSFAIELFRQRDGAHCASAHFVWVCVGLSDSRPTPIPEATRAALSPG
>Mature_137_residues
SVDDRPLASFRVSMRDIDIYGHVHNSRYLDYCEDAVVEFLRQRQILSHFRHTSSGVAYHVKKAEITFHSPIDLDDVVEAK
VDVEKIGRTSLSFAIELFRQRDGAHCASAHFVWVCVGLSDSRPTPIPEATRAALSPG

Specific function: Unknown

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15541; Mature: 15409

Theoretical pI: Translated: 6.71; Mature: 6.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVDDRPLASFRVSMRDIDIYGHVHNSRYLDYCEDAVVEFLRQRQILSHFRHTSSGVAYH
CCCCCCCHHHHHHHHEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE
VKKAEITFHSPIDLDDVVEAKVDVEKIGRTSLSFAIELFRQRDGAHCASAHFVWVCVGLS
EEEEEEEEECCCCHHHHHHHHHCHHHHCCHHHHHHHHHHHHCCCCCCCCCEEEEEEEECC
DSRPTPIPEATRAALSPG
CCCCCCCCHHHHHCCCCC
>Mature Secondary Structure 
SVDDRPLASFRVSMRDIDIYGHVHNSRYLDYCEDAVVEFLRQRQILSHFRHTSSGVAYH
CCCCCCHHHHHHHHEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE
VKKAEITFHSPIDLDDVVEAKVDVEKIGRTSLSFAIELFRQRDGAHCASAHFVWVCVGLS
EEEEEEEEECCCCHHHHHHHHHCHHHHCCHHHHHHHHHHHHCCCCCCCCCEEEEEEEECC
DSRPTPIPEATRAALSPG
CCCCCCCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA