| Definition | Rhizobium leguminosarum bv. viciae 3841 plasmid pRL12, complete sequence. |
|---|---|
| Accession | NC_008378 |
| Length | 870,021 |
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The map label for this gene is tftE [H]
Identifier: 116248885
GI number: 116248885
Start: 222958
End: 224016
Strand: Reverse
Name: tftE [H]
Synonym: pRL120215
Alternate gene names: 116248885
Gene position: 224016-222958 (Counterclockwise)
Preceding gene: 116248886
Following gene: 116248884
Centisome position: 25.75
GC content: 62.51
Gene sequence:
>1059_bases ATGGTCGCACCTTTCAGATACACGGTCAGCGCGGCCCAGGTGATCTTCGGGAGCGGCTCGTTGAGCCGTCTCGCCGATGC GATGACAGAGCAGGGCGGCAAACGCGCCCTGATCCTTTCGACCCCGCACCAGAAAGCAGAGGCTGAACGGATCGCAGCTT CCCTCGGCCCGCTTGCGGCGGGACTATTCCACGATGCGACGATGCATACGCCGGTCGATGTGACCGAGCGCGCGATGGCG GCCTATAACGCAGCCGGTGCCGATTGCGTCATTGCGATTGGCGGCGGATCGACGATCGGTCTCGGCAAGGCAATTGCCTA TCGCAACGACGCGCTGCAAATCGTGGTGGCGACGACCTATGCAGGGTCGGAGGTTACACCGATCCTCGGCCAGACAGAGA ACGGGCAGAAAACGACGGTCCGTGGGGCCGGCATCCTGCCCGAAGTGGTGATCTACGATCCTGAATTGACATTAGGATTG CCGGTCGCCATCAGCGTCAGCAGCGGGCTCAATGCGATGGCGCATGCGGTCGAAGGTCTCTACGCGCAGGATCGCAACCC CATTTCGTCAATGATGGCGGTCGAGGGCTTGCGCGCGCTGAAGCAGGCTTTGCCTCAAATCGTCAATGCACCTGGGGATA TCGAGCCGCGAAGCGAAGCGCTTTACGGTTCCTGGCTGTGCGGCACGGTGCTCGGAGCGGTTGGAATGGCCCTGCATCAC AAGCTTTGCCATACGCTGGGCGGTAGCTTCGACCTGCCGCATGCGGAAACTCATGCGGTCATTCTTCCCCATTCTGCCGC CTACAACGCTGAAGCCGCAGCGGACGCGCTAAAGCCCGCTGCCGATCTTTTTGGCGGCTCGCTGGGCAGCGGTCTTTATG ATTTTGCCGCTTCGATCGGCGCCCCCCTGGCGCTGCGCGATCTGGGTATGAAGGAAGCCGATCTGGATCATGCAGCGGAA CTCGCCGCCCAGAACCCCTACTGGAACCCGCGCCCGATCGAACGGGAAGCGATCCGGGCTTTGTTGCAGAGCGCCTGGGA GGGCGCGCGGCCGCGTTAA
Upstream 100 bases:
>100_bases CATGCTGCAAACTGGTTCGACAGCGCCACCATCTCCGAAGCCGACCGTCTGAAGATCGGTCGCACCAACGCAGTTTCACT CTTCAAACTCGATCGATAGC
Downstream 100 bases:
>100_bases TACCTTAGGAGGATGGCCACGTGCCTGAATATTTCAGCGAAGAGAGATCCGTGGAAGCCGTCAACTCGCGGATGGGGCAG GACATTAATCCGCGCCTGGC
Product: putative maleylacetate reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 352; Mature: 352
Protein sequence:
>352_residues MVAPFRYTVSAAQVIFGSGSLSRLADAMTEQGGKRALILSTPHQKAEAERIAASLGPLAAGLFHDATMHTPVDVTERAMA AYNAAGADCVIAIGGGSTIGLGKAIAYRNDALQIVVATTYAGSEVTPILGQTENGQKTTVRGAGILPEVVIYDPELTLGL PVAISVSSGLNAMAHAVEGLYAQDRNPISSMMAVEGLRALKQALPQIVNAPGDIEPRSEALYGSWLCGTVLGAVGMALHH KLCHTLGGSFDLPHAETHAVILPHSAAYNAEAAADALKPAADLFGGSLGSGLYDFAASIGAPLALRDLGMKEADLDHAAE LAAQNPYWNPRPIEREAIRALLQSAWEGARPR
Sequences:
>Translated_352_residues MVAPFRYTVSAAQVIFGSGSLSRLADAMTEQGGKRALILSTPHQKAEAERIAASLGPLAAGLFHDATMHTPVDVTERAMA AYNAAGADCVIAIGGGSTIGLGKAIAYRNDALQIVVATTYAGSEVTPILGQTENGQKTTVRGAGILPEVVIYDPELTLGL PVAISVSSGLNAMAHAVEGLYAQDRNPISSMMAVEGLRALKQALPQIVNAPGDIEPRSEALYGSWLCGTVLGAVGMALHH KLCHTLGGSFDLPHAETHAVILPHSAAYNAEAAADALKPAADLFGGSLGSGLYDFAASIGAPLALRDLGMKEADLDHAAE LAAQNPYWNPRPIEREAIRALLQSAWEGARPR >Mature_352_residues MVAPFRYTVSAAQVIFGSGSLSRLADAMTEQGGKRALILSTPHQKAEAERIAASLGPLAAGLFHDATMHTPVDVTERAMA AYNAAGADCVIAIGGGSTIGLGKAIAYRNDALQIVVATTYAGSEVTPILGQTENGQKTTVRGAGILPEVVIYDPELTLGL PVAISVSSGLNAMAHAVEGLYAQDRNPISSMMAVEGLRALKQALPQIVNAPGDIEPRSEALYGSWLCGTVLGAVGMALHH KLCHTLGGSFDLPHAETHAVILPHSAAYNAEAAADALKPAADLFGGSLGSGLYDFAASIGAPLALRDLGMKEADLDHAAE LAAQNPYWNPRPIEREAIRALLQSAWEGARPR
Specific function: Fucose metabolism; fourth step. [C]
COG id: COG1454
COG function: function code C; Alcohol dehydrogenase, class IV
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the iron-containing alcohol dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1789163, Length=374, Percent_Identity=25.4010695187166, Blast_Score=109, Evalue=3e-25, Organism=Escherichia coli, GI48994951, Length=380, Percent_Identity=25, Blast_Score=102, Evalue=3e-23, Organism=Escherichia coli, GI87082107, Length=213, Percent_Identity=28.169014084507, Blast_Score=88, Evalue=7e-19, Organism=Escherichia coli, GI1787493, Length=407, Percent_Identity=24.5700245700246, Blast_Score=80, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17537053, Length=424, Percent_Identity=22.1698113207547, Blast_Score=83, Evalue=2e-16, Organism=Saccharomyces cerevisiae, GI6321181, Length=376, Percent_Identity=27.3936170212766, Blast_Score=120, Evalue=4e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001670 [H]
Pfam domain/function: PF00465 Fe-ADH [H]
EC number: =1.3.1.32 [H]
Molecular weight: Translated: 36557; Mature: 36557
Theoretical pI: Translated: 5.74; Mature: 5.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVAPFRYTVSAAQVIFGSGSLSRLADAMTEQGGKRALILSTPHQKAEAERIAASLGPLAA CCCCCEEHHHHHHHEECCCCHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHH GLFHDATMHTPVDVTERAMAAYNAAGADCVIAIGGGSTIGLGKAIAYRNDALQIVVATTY HHHHCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHEECCCCEEEEEEEEC AGSEVTPILGQTENGQKTTVRGAGILPEVVIYDPELTLGLPVAISVSSGLNAMAHAVEGL CCCCCCCCCCCCCCCCEEEEECCCCCCEEEEECCCEEECCCEEEEECCCHHHHHHHHHHH YAQDRNPISSMMAVEGLRALKQALPQIVNAPGDIEPRSEALYGSWLCGTVLGAVGMALHH HHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH KLCHTLGGSFDLPHAETHAVILPHSAAYNAEAAADALKPAADLFGGSLGSGLYDFAASIG HHHHHCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHC APLALRDLGMKEADLDHAAELAAQNPYWNPRPIEREAIRALLQSAWEGARPR CCHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MVAPFRYTVSAAQVIFGSGSLSRLADAMTEQGGKRALILSTPHQKAEAERIAASLGPLAA CCCCCEEHHHHHHHEECCCCHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHH GLFHDATMHTPVDVTERAMAAYNAAGADCVIAIGGGSTIGLGKAIAYRNDALQIVVATTY HHHHCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHEECCCCEEEEEEEEC AGSEVTPILGQTENGQKTTVRGAGILPEVVIYDPELTLGLPVAISVSSGLNAMAHAVEGL CCCCCCCCCCCCCCCCEEEEECCCCCCEEEEECCCEEECCCEEEEECCCHHHHHHHHHHH YAQDRNPISSMMAVEGLRALKQALPQIVNAPGDIEPRSEALYGSWLCGTVLGAVGMALHH HHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH KLCHTLGGSFDLPHAETHAVILPHSAAYNAEAAADALKPAADLFGGSLGSGLYDFAASIG HHHHHCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHC APLALRDLGMKEADLDHAAELAAQNPYWNPRPIEREAIRALLQSAWEGARPR CCHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7538273 [H]