Click here to switch to the map view.

The map label for this gene is 116248883

Identifier: 116248883

GI number: 116248883

Start: 221796

End: 222092

Strand: Reverse

Name: 116248883

Synonym: pRL120213

Alternate gene names: NA

Gene position: 222092-221796 (Counterclockwise)

Preceding gene: 116248884

Following gene: 116248873

Centisome position: 25.53

GC content: 62.96

Gene sequence:

>297_bases
ATGATCGTCGCCCGCTACGCGGTATCCGACCCCGGCAAGGCTGCCGAACGCTCCCGATTGATCGAGGAGCACAAGGCCTA
TCTGCATGGCGCGGCGATCCGCATCCTGCTGTCCGGACCTTCCGCACCGCCGGCGGAGGGCAAAGGTTCCACCGCAATCG
TGATGGCGCAAGTCGAAACGCTCGCCGAGTTCGAGGCGTTCAGCGCAGGAGATCCCTTCGTCCGCTCCGGCGTTTACGCG
AGCGTCGATATATTCGAATGGCGGCCCAGTCTTGGGCTTCTTCTGGAGAGTCTCTGA

Upstream 100 bases:

>100_bases
GTGTCAAAAACAGCCTGGTCGCGCCTTTCGAGCGTGTCGATCATCCCACGGTCTGGCGCTCCGATTTCGATTTCGTGCTG
ACGCCGGTTGAGAATAGACA

Downstream 100 bases:

>100_bases
TCGGCGTTTTGACCTGCTGAAAGCGATCAGATGTAGGTCATTTCGAAGACAGCGGCGTTGTCCTGAACCTCGCGCAGCCC
CTTGTACGAGGCATGGCGGA

Product: YciI-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 98; Mature: 98

Protein sequence:

>98_residues
MIVARYAVSDPGKAAERSRLIEEHKAYLHGAAIRILLSGPSAPPAEGKGSTAIVMAQVETLAEFEAFSAGDPFVRSGVYA
SVDIFEWRPSLGLLLESL

Sequences:

>Translated_98_residues
MIVARYAVSDPGKAAERSRLIEEHKAYLHGAAIRILLSGPSAPPAEGKGSTAIVMAQVETLAEFEAFSAGDPFVRSGVYA
SVDIFEWRPSLGLLLESL
>Mature_98_residues
MIVARYAVSDPGKAAERSRLIEEHKAYLHGAAIRILLSGPSAPPAEGKGSTAIVMAQVETLAEFEAFSAGDPFVRSGVYA
SVDIFEWRPSLGLLLESL

Specific function: Unknown

COG id: COG2350

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10459; Mature: 10459

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVARYAVSDPGKAAERSRLIEEHKAYLHGAAIRILLSGPSAPPAEGKGSTAIVMAQVET
CEEEEEECCCCCCHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCCCEEEEEEEHHH
LAEFEAFSAGDPFVRSGVYASVDIFEWRPSLGLLLESL
HHHHHHCCCCCCHHHCCCEEEEEEEECCCCHHHHHHCC
>Mature Secondary Structure
MIVARYAVSDPGKAAERSRLIEEHKAYLHGAAIRILLSGPSAPPAEGKGSTAIVMAQVET
CEEEEEECCCCCCHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCCCEEEEEEEHHH
LAEFEAFSAGDPFVRSGVYASVDIFEWRPSLGLLLESL
HHHHHHCCCCCCHHHCCCEEEEEEEECCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA