Click here to switch to the map view.

The map label for this gene is 116248858

Identifier: 116248858

GI number: 116248858

Start: 192710

End: 193939

Strand: Reverse

Name: 116248858

Synonym: pRL120187

Alternate gene names: NA

Gene position: 193939-192710 (Counterclockwise)

Preceding gene: 116248860

Following gene: 116248857

Centisome position: 22.29

GC content: 64.96

Gene sequence:

>1230_bases
ATGGACTACGAGGTTGCGATTGTCGGCGCTGGCGCAGCCGGCATTGCAGCAGCAAAAGGGCTGGCCGATGCCGGGCGCTC
GGTCATCATCCTGGAAGCCAGCAACCGCGTGGGTGGACGGGCCTGGACAATCGAGCTGGCCGGAATGCCGCTGGATATGG
GTTGCGGCTGGCTGCATTCCGCCGAGCGCAATCCTCTCGTCGCCATTGGCCGTGGGGCCGGGTTCAATATCGAGCGCGGG
CCGACGGCGTGGCAAAGCCAGTGGCGCGATCTCGGCTTTACGCAGGATGAGCGCGCCGCGGCGGCAGCGGCATGGACCGC
TCTTGAGGAGCGGATGCGGACCAATCCTCCCGCCAGCGACAGGGCGTCGGACGCGCTGGAGCCGGGCGGCAAATGGAACG
CCTACTGCCAGTCCCTCAGCGGATATATGAACGGCGCGCCGCTCGATCGGCTGTCGGTCGCCGACTTTCTTGCCTATGAC
AATGCAGCGACCGACGCCAATTGGCGGGTGCAGGAAGGCTATGGAAGTCTGATCAGCGCGACCGTTCCGAACGTGGCCTT
GCGCCTTTCGACGCCCGTTCGACGCGTGACATTGACCGCGAACGGCGTCCAGCTGGAGACCGACCGCGGTCCTGTCACGT
CAGGTGCCGCGATCATCACGGCATCGACCACGGTTCTGGCCCGCGGAACCATTATCTTCGCCTCGGAGGCCGACGATCAC
CTCCATGCCGCAAGTCAGCTGCCGCTTGGCCTCGCAGACAAGCTGTTTTTGGAACTCCATGGCAATCATGGTCTCGAGCC
GGAGACCCATCTGCTCGGCGACCCGCAAAATGCCGAGACCGGCAGCTATTATATCCGGCCGCTCGGCCGGCCAATCATCG
AAGGCTTCTTCGGCGGAAACGGCGCTGTCGTCATCGAACGCGCGGGTTTGCTGGACGCATTTGCCTTCGCACTCGACCAG
CTGTCATCGCTGCTCGGCAACAACATTCGCCGCCACTTGCGGCCCCTGGCAGCCTCTTCCTGGTGTCGTACCGATTGGAT
AGGCGGCTCCTACAGCCATGCACTGCCCGGCCATGCGAGCGCACGCGCAGTCCTGGCGCGACCGGTCGGTGACCGGCTGT
TTTTCGCCGGCGAGGCAACGCACCAGTCCGACTTTTCGACCGCGCATGGCGCATGGGAAAGCGGGTTGCGGGCCGCCGAC
CAGGCTGCGGCCGTTCTAACACGCTCCTGA

Upstream 100 bases:

>100_bases
GAAGAACGTCATTTCAGCATACTAGCAGGCTTTCGAGCACATTGAAGCGGGTGCCGCCCCGATGTAAAGCTTGTGTCGTA
TCAAGCTGATGAGGGCGACG

Downstream 100 bases:

>100_bases
TATAGCAGGGTGCATCTCGTGACCCTCAACACACCGATGCCACTGACCGACGTGCTCTCGGCCTATGTCGCCTTCAATGC
GGAGCAGGGCGATGTCAGCG

Product: putative amine oxidase family protein

Products: NA

Alternate protein names: Twin-Arginine Translocation Pathway Signal; Amine Oxidase Protein; FAD Dependent Oxidoreductase; Polyamine Oxidase; Monoamine Oxidase; Amine Oxidase Family Protein; Amine Oxidoreductase Domain-Containing Protein; Flavin Containing Amine Oxidoreductase

Number of amino acids: Translated: 409; Mature: 409

Protein sequence:

>409_residues
MDYEVAIVGAGAAGIAAAKGLADAGRSVIILEASNRVGGRAWTIELAGMPLDMGCGWLHSAERNPLVAIGRGAGFNIERG
PTAWQSQWRDLGFTQDERAAAAAAWTALEERMRTNPPASDRASDALEPGGKWNAYCQSLSGYMNGAPLDRLSVADFLAYD
NAATDANWRVQEGYGSLISATVPNVALRLSTPVRRVTLTANGVQLETDRGPVTSGAAIITASTTVLARGTIIFASEADDH
LHAASQLPLGLADKLFLELHGNHGLEPETHLLGDPQNAETGSYYIRPLGRPIIEGFFGGNGAVVIERAGLLDAFAFALDQ
LSSLLGNNIRRHLRPLAASSWCRTDWIGGSYSHALPGHASARAVLARPVGDRLFFAGEATHQSDFSTAHGAWESGLRAAD
QAAAVLTRS

Sequences:

>Translated_409_residues
MDYEVAIVGAGAAGIAAAKGLADAGRSVIILEASNRVGGRAWTIELAGMPLDMGCGWLHSAERNPLVAIGRGAGFNIERG
PTAWQSQWRDLGFTQDERAAAAAAWTALEERMRTNPPASDRASDALEPGGKWNAYCQSLSGYMNGAPLDRLSVADFLAYD
NAATDANWRVQEGYGSLISATVPNVALRLSTPVRRVTLTANGVQLETDRGPVTSGAAIITASTTVLARGTIIFASEADDH
LHAASQLPLGLADKLFLELHGNHGLEPETHLLGDPQNAETGSYYIRPLGRPIIEGFFGGNGAVVIERAGLLDAFAFALDQ
LSSLLGNNIRRHLRPLAASSWCRTDWIGGSYSHALPGHASARAVLARPVGDRLFFAGEATHQSDFSTAHGAWESGLRAAD
QAAAVLTRS
>Mature_409_residues
MDYEVAIVGAGAAGIAAAKGLADAGRSVIILEASNRVGGRAWTIELAGMPLDMGCGWLHSAERNPLVAIGRGAGFNIERG
PTAWQSQWRDLGFTQDERAAAAAAWTALEERMRTNPPASDRASDALEPGGKWNAYCQSLSGYMNGAPLDRLSVADFLAYD
NAATDANWRVQEGYGSLISATVPNVALRLSTPVRRVTLTANGVQLETDRGPVTSGAAIITASTTVLARGTIIFASEADDH
LHAASQLPLGLADKLFLELHGNHGLEPETHLLGDPQNAETGSYYIRPLGRPIIEGFFGGNGAVVIERAGLLDAFAFALDQ
LSSLLGNNIRRHLRPLAASSWCRTDWIGGSYSHALPGHASARAVLARPVGDRLFFAGEATHQSDFSTAHGAWESGLRAAD
QAAAVLTRS

Specific function: Unknown

COG id: COG1233

COG function: function code Q; Phytoene dehydrogenase and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43201; Mature: 43201

Theoretical pI: Translated: 5.96; Mature: 5.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDYEVAIVGAGAAGIAAAKGLADAGRSVIILEASNRVGGRAWTIELAGMPLDMGCGWLHS
CCEEEEEEECCCHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEEEEECCCCCCCCCCCCC
AERNPLVAIGRGAGFNIERGPTAWQSQWRDLGFTQDERAAAAAAWTALEERMRTNPPASD
CCCCCEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC
RASDALEPGGKWNAYCQSLSGYMNGAPLDRLSVADFLAYDNAATDANWRVQEGYGSLISA
CCHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCEEEECCCCCHHHH
TVPNVALRLSTPVRRVTLTANGVQLETDRGPVTSGAAIITASTTVLARGTIIFASEADDH
CCCCEEEEECCCEEEEEEEECCEEEECCCCCCCCCCEEEEECEEEEEECEEEEECCCCCH
LHAASQLPLGLADKLFLELHGNHGLEPETHLLGDPQNAETGSYYIRPLGRPIIEGFFGGN
HHHHHCCCCCHHCEEEEEECCCCCCCCCHHCCCCCCCCCCCCEEEEECCCHHHHHEECCC
GAVVIERAGLLDAFAFALDQLSSLLGNNIRRHLRPLAASSWCRTDWIGGSYSHALPGHAS
CEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
ARAVLARPVGDRLFFAGEATHQSDFSTAHGAWESGLRAADQAAAVLTRS
CCEEEECCCCCEEEEECCCCCCCCCCHHCCHHHHHHHHHHHHHHHEECC
>Mature Secondary Structure
MDYEVAIVGAGAAGIAAAKGLADAGRSVIILEASNRVGGRAWTIELAGMPLDMGCGWLHS
CCEEEEEEECCCHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEEEEECCCCCCCCCCCCC
AERNPLVAIGRGAGFNIERGPTAWQSQWRDLGFTQDERAAAAAAWTALEERMRTNPPASD
CCCCCEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC
RASDALEPGGKWNAYCQSLSGYMNGAPLDRLSVADFLAYDNAATDANWRVQEGYGSLISA
CCHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCEEEECCCCCHHHH
TVPNVALRLSTPVRRVTLTANGVQLETDRGPVTSGAAIITASTTVLARGTIIFASEADDH
CCCCEEEEECCCEEEEEEEECCEEEECCCCCCCCCCEEEEECEEEEEECEEEEECCCCCH
LHAASQLPLGLADKLFLELHGNHGLEPETHLLGDPQNAETGSYYIRPLGRPIIEGFFGGN
HHHHHCCCCCHHCEEEEEECCCCCCCCCHHCCCCCCCCCCCCEEEEECCCHHHHHEECCC
GAVVIERAGLLDAFAFALDQLSSLLGNNIRRHLRPLAASSWCRTDWIGGSYSHALPGHAS
CEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
ARAVLARPVGDRLFFAGEATHQSDFSTAHGAWESGLRAADQAAAVLTRS
CCEEEECCCCCEEEEECCCCCCCCCCHHCCHHHHHHHHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA