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The map label for this gene is ybjJ [H]

Identifier: 116248856

GI number: 116248856

Start: 190618

End: 191802

Strand: Direct

Name: ybjJ [H]

Synonym: pRL120185

Alternate gene names: 116248856

Gene position: 190618-191802 (Clockwise)

Preceding gene: 116248853

Following gene: 116248859

Centisome position: 21.91

GC content: 62.28

Gene sequence:

>1185_bases
ATGAAAATCGCGCCGCAGCAGCGGATCTATGTCTGCTTCTTTCTCTTCGCTGTGTCGCTGGGGGCGCTGCTGTCGAGGAT
GCCGGATTTGCAGGTTGCGCTGGGCGTCAATAAGTCCGAACTTGGTTTAACGCTGATAGGGGCTGCGATCGGCGCCTTGA
TTTCGTTGACTTTCTCTTCGCCCTTGATCGCTCGGCTCGGCGCGCGTACCACGGCATTCATTACTGTTCTCGGCACGTCT
GCGCTGCTATCGCTGGTGCCGTGGATCGGTGCGGCGCCGGTCGTGTTCTGTGTGCTCTTCATCGAGGGGCTGCTCGCCGG
GGCGCTGGAGATCAATCTCAATGTTGAGATCGACCGCATCGAAGCGCAGCTAGGACGCGGCGTGATGAACAGGGCGCATG
GTTTCTGGAGCCTCGGCTTCTTCGTCACAGCACTTGTCTCCTCGGTCGTCCGCCAAGCGGGCATTTCGATGGAACTCCAT
CTCGCCGCGACCTTTGTCACGGTTCTTGTCATCGGCATCTGGGCGATTTCCGGCATGCGGAATGCGCCGGCGCGGATCGC
GTTGCATGAAGGCAAGGCGCCGCTGGTAGCGCTTCCCACCTGGGGCCTAATGCCGCTTTGCGTGATCGGCATCGCGGCCT
TTCTCGTCGAAGGTGCCGGGATCGACTGGTCGGCGATCTATATGCGCGACGTGTTTTCGGTCGAGCCCTTCATTGGCGGA
CTGGGATTGACGCTCTTTACCTTCTGCATGGCGCTGGCGCGCCTGTTCGTCGATCCGCTGGTCGATCGGTTTGGCGCGCG
GGCCGTCACCACGATGTTGCTTGTTCTTTCGGCGATCGGCGTCTGCGCCGTGTCGGGGGCGCCGCATCCCTATGTCGCGC
TGGCGGGTTTTGCCTTGATGGGCGCCGGCTGCAGCGCGGTCTATCCTCTCGCCGTTTCGGCGGCGGCCCAACGCACAGAT
CGCGCGGCCTATCTCAACGTCGCCGCCCTCGGCCAGATGAGCTTTGTCGTCTTCTTCCTGGCGCCGCCCCTGCTCGGTTT
CATTGCCGAACATGCCGGCATCCGGACATCCTATCTCGTCTGTCTTCCGCTGATCATTTACGCGCTCTTTTCGGCCAAGG
CGCTTGCTACGCGCCGGGCTGCCGGCGGAGGTAGCGCTGCGACTGCTCGGAGCGTCAACGGGTAA

Upstream 100 bases:

>100_bases
TTCCTCAGAAACAAGTTTCGATCTCAGGCCCTGTGAGATAAACATCACCGGTCCATACGCGCGTGTTCTGCTTCGACGCG
TCAATCCCCGGAGTTGCATC

Downstream 100 bases:

>100_bases
CGGATTGTGCTGCCGGTTTCCGGCTGCGCGATTGGTTCAGCGCCACGGCATCGGCCGCCTGCCGGATGTCGATGGCGATA
GTCCGGTGAAGAAGAAGTTC

Product: putative transmembrane transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 394; Mature: 394

Protein sequence:

>394_residues
MKIAPQQRIYVCFFLFAVSLGALLSRMPDLQVALGVNKSELGLTLIGAAIGALISLTFSSPLIARLGARTTAFITVLGTS
ALLSLVPWIGAAPVVFCVLFIEGLLAGALEINLNVEIDRIEAQLGRGVMNRAHGFWSLGFFVTALVSSVVRQAGISMELH
LAATFVTVLVIGIWAISGMRNAPARIALHEGKAPLVALPTWGLMPLCVIGIAAFLVEGAGIDWSAIYMRDVFSVEPFIGG
LGLTLFTFCMALARLFVDPLVDRFGARAVTTMLLVLSAIGVCAVSGAPHPYVALAGFALMGAGCSAVYPLAVSAAAQRTD
RAAYLNVAALGQMSFVVFFLAPPLLGFIAEHAGIRTSYLVCLPLIIYALFSAKALATRRAAGGGSAATARSVNG

Sequences:

>Translated_394_residues
MKIAPQQRIYVCFFLFAVSLGALLSRMPDLQVALGVNKSELGLTLIGAAIGALISLTFSSPLIARLGARTTAFITVLGTS
ALLSLVPWIGAAPVVFCVLFIEGLLAGALEINLNVEIDRIEAQLGRGVMNRAHGFWSLGFFVTALVSSVVRQAGISMELH
LAATFVTVLVIGIWAISGMRNAPARIALHEGKAPLVALPTWGLMPLCVIGIAAFLVEGAGIDWSAIYMRDVFSVEPFIGG
LGLTLFTFCMALARLFVDPLVDRFGARAVTTMLLVLSAIGVCAVSGAPHPYVALAGFALMGAGCSAVYPLAVSAAAQRTD
RAAYLNVAALGQMSFVVFFLAPPLLGFIAEHAGIRTSYLVCLPLIIYALFSAKALATRRAAGGGSAATARSVNG
>Mature_394_residues
MKIAPQQRIYVCFFLFAVSLGALLSRMPDLQVALGVNKSELGLTLIGAAIGALISLTFSSPLIARLGARTTAFITVLGTS
ALLSLVPWIGAAPVVFCVLFIEGLLAGALEINLNVEIDRIEAQLGRGVMNRAHGFWSLGFFVTALVSSVVRQAGISMELH
LAATFVTVLVIGIWAISGMRNAPARIALHEGKAPLVALPTWGLMPLCVIGIAAFLVEGAGIDWSAIYMRDVFSVEPFIGG
LGLTLFTFCMALARLFVDPLVDRFGARAVTTMLLVLSAIGVCAVSGAPHPYVALAGFALMGAGCSAVYPLAVSAAAQRTD
RAAYLNVAALGQMSFVVFFLAPPLLGFIAEHAGIRTSYLVCLPLIIYALFSAKALATRRAAGGGSAATARSVNG

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787068, Length=366, Percent_Identity=29.2349726775956, Blast_Score=122, Evalue=4e-29,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 41171; Mature: 41171

Theoretical pI: Translated: 9.09; Mature: 9.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIAPQQRIYVCFFLFAVSLGALLSRMPDLQVALGVNKSELGLTLIGAAIGALISLTFSS
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCC
PLIARLGARTTAFITVLGTSALLSLVPWIGAAPVVFCVLFIEGLLAGALEINLNVEIDRI
HHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEEEEEEEEHHHH
EAQLGRGVMNRAHGFWSLGFFVTALVSSVVRQAGISMELHLAATFVTVLVIGIWAISGMR
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHCCCC
NAPARIALHEGKAPLVALPTWGLMPLCVIGIAAFLVEGAGIDWSAIYMRDVFSVEPFIGG
CCCCEEEEECCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCHHHHH
LGLTLFTFCMALARLFVDPLVDRFGARAVTTMLLVLSAIGVCAVSGAPHPYVALAGFALM
HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
GAGCSAVYPLAVSAAAQRTDRAAYLNVAALGQMSFVVFFLAPPLLGFIAEHAGIRTSYLV
CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
CLPLIIYALFSAKALATRRAAGGGSAATARSVNG
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKIAPQQRIYVCFFLFAVSLGALLSRMPDLQVALGVNKSELGLTLIGAAIGALISLTFSS
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCC
PLIARLGARTTAFITVLGTSALLSLVPWIGAAPVVFCVLFIEGLLAGALEINLNVEIDRI
HHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEEEEEEEEHHHH
EAQLGRGVMNRAHGFWSLGFFVTALVSSVVRQAGISMELHLAATFVTVLVIGIWAISGMR
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHCCCC
NAPARIALHEGKAPLVALPTWGLMPLCVIGIAAFLVEGAGIDWSAIYMRDVFSVEPFIGG
CCCCEEEEECCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCHHHHH
LGLTLFTFCMALARLFVDPLVDRFGARAVTTMLLVLSAIGVCAVSGAPHPYVALAGFALM
HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
GAGCSAVYPLAVSAAAQRTDRAAYLNVAALGQMSFVVFFLAPPLLGFIAEHAGIRTSYLV
CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
CLPLIIYALFSAKALATRRAAGGGSAATARSVNG
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]