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The map label for this gene is ybgL [C]

Identifier: 116248827

GI number: 116248827

Start: 153684

End: 154460

Strand: Reverse

Name: ybgL [C]

Synonym: pRL120154

Alternate gene names: 116248827

Gene position: 154460-153684 (Counterclockwise)

Preceding gene: 116248829

Following gene: 116248826

Centisome position: 17.75

GC content: 61.78

Gene sequence:

>777_bases
TTGAAAGATATCGTCGACATCAACTGCGATATGGGAGAGGCCTTCGGTCGCTGGCGGATCGGCGATACGCAGGATTCGCT
GCTGATCTCGCACATCAGCTCGGCCAATATCGCCACCGGCTTCCATGCCGGCGACCCGAACCTGATCGACGAGACCGTGG
CGCTAGCCGCGGCTCATGGGGTCGGGATCGGCGCGCATCCTGGCTACAATGACCTTCAGGGCTTCGGCCGTCGCAAGATT
GTCGGCAGCAGCAAGGAGCTGGTCAACGACATCATCTATCAGGTGGGCGCGCTGCGCGAGTTCGCCCGCCGCTACAGCGT
GCCGGTGCAGCATGTGAAGCCGCATGGCGCGCTCTACATGGAGATGGCGGTCAATCCGGACTTCGCTCAGCTCTTTGTCC
AGTATATGCGCATCGTCTCGCCCAACGCCTTTGTCTTCTGCATGGGCGGCTCGGCGACGCACAAGGCGGCACTCGATGCC
GGACAGCCTGTCGTGCGCGAGTTCTACGCTGACCGCGACTACGACGACAGCGGTTCGATCGTCTTTACCCGCGATGCCGG
CCGCCCAGACCCGATGGTGCTGGCGCAGAAAGTGCTGCGCGCCTGCCAGGAGGGCAAGGTCCGCACGGTCACGGGCAACG
ATATCGACATCGAATTTGAATCCATCTGCTTTCATTCCGATACGCTCGGCGCGCTCGACATCGTTCTCAGCATGCGCGAG
CTTCTGATCGGTGCCGGAATCCGGATCGTGCCCGTGTCGCAGATCCTTGGACATTAG

Upstream 100 bases:

>100_bases
GGTATCTCTTTTCTCGATAATGATGCCGCAAAAAATGAATTTTTCAAATCCTGTTTCGTCGCGTAGCGTTTTCGTCGGAT
GACAACGGCGGGAAGACAGT

Downstream 100 bases:

>100_bases
ACTTTGCGGAGACCGACCATGAGCAAGATTGAAATCCGTTCGCCCCTGCCGGGCACCTTCTACCGGGCTTCGGCGCCGGA
TGCGCCGCCCTTCAAGGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MKDIVDINCDMGEAFGRWRIGDTQDSLLISHISSANIATGFHAGDPNLIDETVALAAAHGVGIGAHPGYNDLQGFGRRKI
VGSSKELVNDIIYQVGALREFARRYSVPVQHVKPHGALYMEMAVNPDFAQLFVQYMRIVSPNAFVFCMGGSATHKAALDA
GQPVVREFYADRDYDDSGSIVFTRDAGRPDPMVLAQKVLRACQEGKVRTVTGNDIDIEFESICFHSDTLGALDIVLSMRE
LLIGAGIRIVPVSQILGH

Sequences:

>Translated_258_residues
MKDIVDINCDMGEAFGRWRIGDTQDSLLISHISSANIATGFHAGDPNLIDETVALAAAHGVGIGAHPGYNDLQGFGRRKI
VGSSKELVNDIIYQVGALREFARRYSVPVQHVKPHGALYMEMAVNPDFAQLFVQYMRIVSPNAFVFCMGGSATHKAALDA
GQPVVREFYADRDYDDSGSIVFTRDAGRPDPMVLAQKVLRACQEGKVRTVTGNDIDIEFESICFHSDTLGALDIVLSMRE
LLIGAGIRIVPVSQILGH
>Mature_258_residues
MKDIVDINCDMGEAFGRWRIGDTQDSLLISHISSANIATGFHAGDPNLIDETVALAAAHGVGIGAHPGYNDLQGFGRRKI
VGSSKELVNDIIYQVGALREFARRYSVPVQHVKPHGALYMEMAVNPDFAQLFVQYMRIVSPNAFVFCMGGSATHKAALDA
GQPVVREFYADRDYDDSGSIVFTRDAGRPDPMVLAQKVLRACQEGKVRTVTGNDIDIEFESICFHSDTLGALDIVLSMRE
LLIGAGIRIVPVSQILGH

Specific function: Unknown

COG id: COG1540

COG function: function code R; Uncharacterized proteins, homologs of lactam utilization protein B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0271 (lamB) family [H]

Homologues:

Organism=Escherichia coli, GI1786931, Length=246, Percent_Identity=32.9268292682927, Blast_Score=133, Evalue=1e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR005501 [H]

Pfam domain/function: PF03746 LamB_YcsF [H]

EC number: NA

Molecular weight: Translated: 28090; Mature: 28090

Theoretical pI: Translated: 5.79; Mature: 5.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDIVDINCDMGEAFGRWRIGDTQDSLLISHISSANIATGFHAGDPNLIDETVALAAAHG
CCCCEECCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCEECCCCCHHHHHHHHHHHHC
VGIGAHPGYNDLQGFGRRKIVGSSKELVNDIIYQVGALREFARRYSVPVQHVKPHGALYM
CCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCEEEE
EMAVNPDFAQLFVQYMRIVSPNAFVFCMGGSATHKAALDAGQPVVREFYADRDYDDSGSI
EEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHCCCCHHHHHHHCCCCCCCCCCE
VFTRDAGRPDPMVLAQKVLRACQEGKVRTVTGNDIDIEFESICFHSDTLGALDIVLSMRE
EEEECCCCCCHHHHHHHHHHHHHCCCEEEECCCCEEEEEHHEEECCCCHHHHHHHHHHHH
LLIGAGIRIVPVSQILGH
HHHHCCCEEEEHHHHHCC
>Mature Secondary Structure
MKDIVDINCDMGEAFGRWRIGDTQDSLLISHISSANIATGFHAGDPNLIDETVALAAAHG
CCCCEECCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCEECCCCCHHHHHHHHHHHHC
VGIGAHPGYNDLQGFGRRKIVGSSKELVNDIIYQVGALREFARRYSVPVQHVKPHGALYM
CCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCEEEE
EMAVNPDFAQLFVQYMRIVSPNAFVFCMGGSATHKAALDAGQPVVREFYADRDYDDSGSI
EEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHCCCCHHHHHHHCCCCCCCCCCE
VFTRDAGRPDPMVLAQKVLRACQEGKVRTVTGNDIDIEFESICFHSDTLGALDIVLSMRE
EEEECCCCCCHHHHHHHHHHHHHCCCEEEECCCCEEEEEHHEEECCCCHHHHHHHHHHHH
LLIGAGIRIVPVSQILGH
HHHHCCCEEEEHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]