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The map label for this gene is 116248814

Identifier: 116248814

GI number: 116248814

Start: 140727

End: 141608

Strand: Reverse

Name: 116248814

Synonym: pRL120140

Alternate gene names: NA

Gene position: 141608-140727 (Counterclockwise)

Preceding gene: 116248815

Following gene: 116248813

Centisome position: 16.28

GC content: 60.43

Gene sequence:

>882_bases
ATGGCAAAAGAAATCTTCTGCAGCTTCGGCATCGACGTGGACGCCGTTGCCGGCTGGCTCGGCTCGTATGGCGGCGAAGA
TTCGCCGGACGACATCTCGCGGGGCCTGTTTTCCGGCGAAGTCGGCAGCCCACGGCTGTTGAAGCTGTTCGAGCGCTTCG
GCATCAAGACCACCTGGTTCATCCCCGGCCACTCCATCGAGACGTTCCCGGAGCAGATGCAGGCCGTCGCCGCTGCCGGC
CACGAGATCGGCATCCATGGCTACACGCATGAAAACCCGATCGCAATGACGCGCGAGCAGGAGACCGAGGTGCTCGACAA
GTGCATCGAGCTCGTCGCCAAGCTCTCCGGCAAGCGGCCGACCGGCTATGTGGCGCCCTGGTGGGAATTCTCCAACGTCA
CCAACGAACTCCTGCTCGAGCGTGGCATCAAGTACGACCATTCGCTCATGCATAACGACTTCACGCCGTACTATGTCCGC
GTCGGCGACAGCTGGACTAAGATCGACTATTCGAAGAAGCCGTCGGACTGGATGGTGCCTCTGAAGCGCGGTCACGAGAC
CGATCTGATCGAGATCCCGGCATCGTGGTATCTCGACGACCTGCCGCCGATGATGTTCATCAAGAAAGCCCCCAACAGCC
ACGGCTTCGTCAACCCGCACGACATCGAGCAGATGTGGCGCGACCAGTTCGACTGGGTCTATCGCGAGATGGACTACGCC
GTCTTCCCGATCACCATCCACCCTGATGTCGCCGGCCGGCCGCAGGTACTGATGATGTTGGAGCGCCTCTACGCCCACAT
GATCAAACATCCCGGCGTCAAGTTCGTGACGATGAACGAGATCGCCGACGACTTTGCCAAACGCTTCCCGCGCAAGAAGT
AA

Upstream 100 bases:

>100_bases
CGCTCGCCTTCAAGCCCGAAAACGCCACCGTCATTCCCGCCCACTGAACAGCCGGTCGATCAAAGCCGGACCAACGAGAA
CATCACAAGGAGACCCCGCA

Downstream 100 bases:

>100_bases
GAGGCAAAGGCGATGTGTTCGCTCTGCGGCATTCTAGGTGGTAACGAGCACTGGGCCGATGCGGTCGCGCGGCCCGGGGT
CTATACCCGCTCCGCCGAGC

Product: putative imidase

Products: NA

Alternate protein names: Polysaccharide Deacetylase Family Protein; Xylanase/Chitin Deacetylase; Polysaccharide Deacetylase Domain Protein; Hydrolase; Polysaccharide Deacetylase Family; Urate Catabolism Protein; Polysaccharide Deacetylase Domain-Containing Protein; Saccharide Deacetylase Slightly; Cyclic Imide Hydrolase; Deacetylase; Chitooligosaccharide Deacetylase

Number of amino acids: Translated: 293; Mature: 292

Protein sequence:

>293_residues
MAKEIFCSFGIDVDAVAGWLGSYGGEDSPDDISRGLFSGEVGSPRLLKLFERFGIKTTWFIPGHSIETFPEQMQAVAAAG
HEIGIHGYTHENPIAMTREQETEVLDKCIELVAKLSGKRPTGYVAPWWEFSNVTNELLLERGIKYDHSLMHNDFTPYYVR
VGDSWTKIDYSKKPSDWMVPLKRGHETDLIEIPASWYLDDLPPMMFIKKAPNSHGFVNPHDIEQMWRDQFDWVYREMDYA
VFPITIHPDVAGRPQVLMMLERLYAHMIKHPGVKFVTMNEIADDFAKRFPRKK

Sequences:

>Translated_293_residues
MAKEIFCSFGIDVDAVAGWLGSYGGEDSPDDISRGLFSGEVGSPRLLKLFERFGIKTTWFIPGHSIETFPEQMQAVAAAG
HEIGIHGYTHENPIAMTREQETEVLDKCIELVAKLSGKRPTGYVAPWWEFSNVTNELLLERGIKYDHSLMHNDFTPYYVR
VGDSWTKIDYSKKPSDWMVPLKRGHETDLIEIPASWYLDDLPPMMFIKKAPNSHGFVNPHDIEQMWRDQFDWVYREMDYA
VFPITIHPDVAGRPQVLMMLERLYAHMIKHPGVKFVTMNEIADDFAKRFPRKK
>Mature_292_residues
AKEIFCSFGIDVDAVAGWLGSYGGEDSPDDISRGLFSGEVGSPRLLKLFERFGIKTTWFIPGHSIETFPEQMQAVAAAGH
EIGIHGYTHENPIAMTREQETEVLDKCIELVAKLSGKRPTGYVAPWWEFSNVTNELLLERGIKYDHSLMHNDFTPYYVRV
GDSWTKIDYSKKPSDWMVPLKRGHETDLIEIPASWYLDDLPPMMFIKKAPNSHGFVNPHDIEQMWRDQFDWVYREMDYAV
FPITIHPDVAGRPQVLMMLERLYAHMIKHPGVKFVTMNEIADDFAKRFPRKK

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33758; Mature: 33627

Theoretical pI: Translated: 5.92; Mature: 5.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKEIFCSFGIDVDAVAGWLGSYGGEDSPDDISRGLFSGEVGSPRLLKLFERFGIKTTWF
CCCCEEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEE
IPGHSIETFPEQMQAVAAAGHEIGIHGYTHENPIAMTREQETEVLDKCIELVAKLSGKRP
ECCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCEEECCHHHHHHHHHHHHHHHHHCCCCC
TGYVAPWWEFSNVTNELLLERGIKYDHSLMHNDFTPYYVRVGDSWTKIDYSKKPSDWMVP
CCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEECCCEEEECCCCCCCCCCCC
LKRGHETDLIEIPASWYLDDLPPMMFIKKAPNSHGFVNPHDIEQMWRDQFDWVYREMDYA
CCCCCCCCEEECCHHHHHCCCCHHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCE
VFPITIHPDVAGRPQVLMMLERLYAHMIKHPGVKFVTMNEIADDFAKRFPRKK
EEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
AKEIFCSFGIDVDAVAGWLGSYGGEDSPDDISRGLFSGEVGSPRLLKLFERFGIKTTWF
CCCEEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEE
IPGHSIETFPEQMQAVAAAGHEIGIHGYTHENPIAMTREQETEVLDKCIELVAKLSGKRP
ECCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCEEECCHHHHHHHHHHHHHHHHHCCCCC
TGYVAPWWEFSNVTNELLLERGIKYDHSLMHNDFTPYYVRVGDSWTKIDYSKKPSDWMVP
CCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEECCCEEEECCCCCCCCCCCC
LKRGHETDLIEIPASWYLDDLPPMMFIKKAPNSHGFVNPHDIEQMWRDQFDWVYREMDYA
CCCCCCCCEEECCHHHHHCCCCHHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCE
VFPITIHPDVAGRPQVLMMLERLYAHMIKHPGVKFVTMNEIADDFAKRFPRKK
EEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA