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The map label for this gene is 116248811

Identifier: 116248811

GI number: 116248811

Start: 138144

End: 139352

Strand: Reverse

Name: 116248811

Synonym: pRL120137

Alternate gene names: NA

Gene position: 139352-138144 (Counterclockwise)

Preceding gene: 116248812

Following gene: 116248810

Centisome position: 16.02

GC content: 63.28

Gene sequence:

>1209_bases
ATGAGAAAAATGCCGAAGAGCTTTCCGACGCCCGCCCTGCATACAGAGGGCCGGATCAAGCTGCGCATCCTCGGCACGGC
GATTTCGCTTCTCGAAGAACTTCGGCTCGGTGCCGAGCGCGATCTCGGCATGGATATCGAATTCGACAATCAGGACTTCA
TGACCGCCCAGCACAAGGCGGCGCTGGAGCCGATGACCTACGACATCTACGACCAGTGCTTCCACAACCTCGATATCGTC
TGGTACTGGCGCGCTGTGCAGCCGATCGACATCGAGCGGATCACGCTTTGGGACGAGATCACCGATCTGACGAAAACGGG
GCGCATTGGACCGAATGCGCGGATCGGGCAGGGCGATGCGCCGGTGACCAAGCTATTCGTGCAGCCGAACCTGGCGCTTG
CCGAAACGCCCTCGCAACGCATCTCGATGCTGCCGACGACGCATAATTTCGACAGCTTCGCCTACCGCACCGATGCGGCC
AATTCCAACCAGATGACCTCCTGGGCGGCATTGCTCGACCCGCGGTGGCACGGGCGCGCAGCCCTCGTCAACGAGCCGGC
GATCGGCATCTTCGACGCCGCACTTGCGGCGCAGTCGGCCGGGCTGATGACCTTTAACAATCTCGGCAACATGAGCGTTG
AGGAAATCGATCGGTTGCTGTGCATTTTGGAAGAGCGCAAGAAGGCCGGCTTTTTCCGCGGCTTCTGGCGTTCGGCCGAG
GACGCGGCGAACCTGATGACGAAGAGCGACACGCAGATCCAGTCGATGTGGTCGCTAGGGATCAGCAAGCTGAACCTGCG
CGGCTTTCCCGTCGAACTCGCCAATCCCGCCGAGGGTTACCGCGCCTGGCATGGCGGGCTCTGCCTGTCGAAACGGCTCT
CCGGCCGGCTGCTCGACGCGGCCTACGATTATCTCAACTGGTGGATCTCCGGCTGGCCCGGCGCGGTGGTGGCCCGGCAG
GGTTATTACATGTCGACGCCGACACGCTCGCGGCCGCACATGACGCCGGCCGAATGGGACTATTGGTACGAGGGCCTGCC
GGCCGCGACCGACCTGCCAGGCCCCGACGGCCTCCTCCGCGTCAAGACGGGTGCGGTGCGCAGCGGCGGCTCCTACTGGC
AGCGCGCCAACTCGATCGCCGTCTGGAACACGACCATGGACGAACACAATTATTTGGTGCGCCGCTGGATGCAGTTCGTG
GCGGCGTGA

Upstream 100 bases:

>100_bases
TCGACGGCATCGCGCCCGAAGTGATCAAGCGATCGTTTGACGCCTTCAATGGGCTCGGCGTGGCAAAAGTCGCGCCGAAG
CGGGTCGAGGAGTTGCAGCC

Downstream 100 bases:

>100_bases
GCAGAACTGGAACGACAGAATGACCCTTTCTTACGGCTCCCTCTCGATCGCCCAGCTCTCCACCCTCATCCAGGGCGGCA
GTGTCGATCCTGTCACGGTG

Product: hypothetical protein

Products: NA

Alternate protein names: Spermidine/Putrescine ABC Transporter; Signal Peptide Prediction; Tat Pathway Signal Sequence Domain Protein; Signal Peptide; Conserved Protein

Number of amino acids: Translated: 402; Mature: 402

Protein sequence:

>402_residues
MRKMPKSFPTPALHTEGRIKLRILGTAISLLEELRLGAERDLGMDIEFDNQDFMTAQHKAALEPMTYDIYDQCFHNLDIV
WYWRAVQPIDIERITLWDEITDLTKTGRIGPNARIGQGDAPVTKLFVQPNLALAETPSQRISMLPTTHNFDSFAYRTDAA
NSNQMTSWAALLDPRWHGRAALVNEPAIGIFDAALAAQSAGLMTFNNLGNMSVEEIDRLLCILEERKKAGFFRGFWRSAE
DAANLMTKSDTQIQSMWSLGISKLNLRGFPVELANPAEGYRAWHGGLCLSKRLSGRLLDAAYDYLNWWISGWPGAVVARQ
GYYMSTPTRSRPHMTPAEWDYWYEGLPAATDLPGPDGLLRVKTGAVRSGGSYWQRANSIAVWNTTMDEHNYLVRRWMQFV
AA

Sequences:

>Translated_402_residues
MRKMPKSFPTPALHTEGRIKLRILGTAISLLEELRLGAERDLGMDIEFDNQDFMTAQHKAALEPMTYDIYDQCFHNLDIV
WYWRAVQPIDIERITLWDEITDLTKTGRIGPNARIGQGDAPVTKLFVQPNLALAETPSQRISMLPTTHNFDSFAYRTDAA
NSNQMTSWAALLDPRWHGRAALVNEPAIGIFDAALAAQSAGLMTFNNLGNMSVEEIDRLLCILEERKKAGFFRGFWRSAE
DAANLMTKSDTQIQSMWSLGISKLNLRGFPVELANPAEGYRAWHGGLCLSKRLSGRLLDAAYDYLNWWISGWPGAVVARQ
GYYMSTPTRSRPHMTPAEWDYWYEGLPAATDLPGPDGLLRVKTGAVRSGGSYWQRANSIAVWNTTMDEHNYLVRRWMQFV
AA
>Mature_402_residues
MRKMPKSFPTPALHTEGRIKLRILGTAISLLEELRLGAERDLGMDIEFDNQDFMTAQHKAALEPMTYDIYDQCFHNLDIV
WYWRAVQPIDIERITLWDEITDLTKTGRIGPNARIGQGDAPVTKLFVQPNLALAETPSQRISMLPTTHNFDSFAYRTDAA
NSNQMTSWAALLDPRWHGRAALVNEPAIGIFDAALAAQSAGLMTFNNLGNMSVEEIDRLLCILEERKKAGFFRGFWRSAE
DAANLMTKSDTQIQSMWSLGISKLNLRGFPVELANPAEGYRAWHGGLCLSKRLSGRLLDAAYDYLNWWISGWPGAVVARQ
GYYMSTPTRSRPHMTPAEWDYWYEGLPAATDLPGPDGLLRVKTGAVRSGGSYWQRANSIAVWNTTMDEHNYLVRRWMQFV
AA

Specific function: Unknown

COG id: COG0687

COG function: function code E; Spermidine/putrescine-binding periplasmic protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45411; Mature: 45411

Theoretical pI: Translated: 6.73; Mature: 6.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKMPKSFPTPALHTEGRIKLRILGTAISLLEELRLGAERDLGMDIEFDNQDFMTAQHKA
CCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHH
ALEPMTYDIYDQCFHNLDIVWYWRAVQPIDIERITLWDEITDLTKTGRIGPNARIGQGDA
HCCCCCHHHHHHHHHCCCEEEEEEECCCCCCEEEEHHHHHHHHHHCCCCCCCCCCCCCCC
PVTKLFVQPNLALAETPSQRISMLPTTHNFDSFAYRTDAANSNQMTSWAALLDPRWHGRA
CEEEEEECCCCEEECCCHHHEEECCCCCCCCCEEEECCCCCCCCHHHHHHHHCCCCCCCE
ALVNEPAIGIFDAALAAQSAGLMTFNNLGNMSVEEIDRLLCILEERKKAGFFRGFWRSAE
EEECCCCCHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHCCHH
DAANLMTKSDTQIQSMWSLGISKLNLRGFPVELANPAEGYRAWHGGLCLSKRLSGRLLDA
HHHHHHCCCCHHHHHHHHHCCCEEECCCCCEEECCCHHHHHHHHCCHHHHHHHCCHHHHH
AYDYLNWWISGWPGAVVARQGYYMSTPTRSRPHMTPAEWDYWYEGLPAATDLPGPDGLLR
HHHHHHHHHCCCCCCEEEECCEEECCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCEEE
VKTGAVRSGGSYWQRANSIAVWNTTMDEHNYLVRRWMQFVAA
EECCCCCCCCHHHHHCCCEEEEECCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRKMPKSFPTPALHTEGRIKLRILGTAISLLEELRLGAERDLGMDIEFDNQDFMTAQHKA
CCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHH
ALEPMTYDIYDQCFHNLDIVWYWRAVQPIDIERITLWDEITDLTKTGRIGPNARIGQGDA
HCCCCCHHHHHHHHHCCCEEEEEEECCCCCCEEEEHHHHHHHHHHCCCCCCCCCCCCCCC
PVTKLFVQPNLALAETPSQRISMLPTTHNFDSFAYRTDAANSNQMTSWAALLDPRWHGRA
CEEEEEECCCCEEECCCHHHEEECCCCCCCCCEEEECCCCCCCCHHHHHHHHCCCCCCCE
ALVNEPAIGIFDAALAAQSAGLMTFNNLGNMSVEEIDRLLCILEERKKAGFFRGFWRSAE
EEECCCCCHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHCCHH
DAANLMTKSDTQIQSMWSLGISKLNLRGFPVELANPAEGYRAWHGGLCLSKRLSGRLLDA
HHHHHHCCCCHHHHHHHHHCCCEEECCCCCEEECCCHHHHHHHHCCHHHHHHHCCHHHHH
AYDYLNWWISGWPGAVVARQGYYMSTPTRSRPHMTPAEWDYWYEGLPAATDLPGPDGLLR
HHHHHHHHHCCCCCCEEEECCEEECCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCEEE
VKTGAVRSGGSYWQRANSIAVWNTTMDEHNYLVRRWMQFVAA
EECCCCCCCCHHHHHCCCEEEEECCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA