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The map label for this gene is 116248797

Identifier: 116248797

GI number: 116248797

Start: 122064

End: 122975

Strand: Reverse

Name: 116248797

Synonym: pRL120123

Alternate gene names: NA

Gene position: 122975-122064 (Counterclockwise)

Preceding gene: 116248798

Following gene: 116248796

Centisome position: 14.13

GC content: 60.64

Gene sequence:

>912_bases
GTGATGAGCGCTGCTGCAAAAGACCAATCGCGCGATTTTGTCGGCTATGGCCCGAACCCACCGGTCATCTCCTGGCCAGG
TGGCGTCACGCTGGCGATCAACCTCGTGCTGAACTACGAGGAGGGGGCCGAATATTCCTGGCTTGAAGACGGACGAAACG
ACAACTGGGGCGAGTACAATATTCCCAACAGCCCGCCGCTGCGCGACCTCGGCACCGAGACCCATTTCGAATACGGCAGT
CGCGCCGGCGTCTGGCGCCTGGCTCGCCTGTTCGACCGTTACGATATTCCGGTAACGATCTCGGCCTGCGCCGTTGCGCT
GGAGAAGAACCCGGCTGTCGTCGATTGGATGAATGCCCGCGGCCACGATCTGCTCGGCCACGGGCTGCGCTGGAGCGAAT
ATTCCGGCATGCCGCGCGATGAGGAGGAGCGGCAGCTTCACGAAGCACTCGCCCTTTATGAGAAATTGACCGGCATAAGG
CCGCTGGGTTGGAATTGCCGATCCTTTCCAAGCGTCAACACCCGTGACCTGATCGTCAGGGAAGGCGGCTTCCTCTATTA
TTCGGACCCCTGCAACGACGATCTTCCGTATTTCCTCGATCACGAGGGTACGAAGCTTCTCGTCGTGCCCTATTCGAAGA
CGCTGAACGACAGCCGCTATCTGATCGCGCCCGGCTACAGCAATCCGCGCGATTTTGCCGAGGATTGCCGATCGGCGATC
GACTACATGATCGGCGAAGCCGACGAGACAGGCGGGCGTATGCTGACGATCGGCGTGCATGCACGCTGGATGGGCCAGCC
CAATCGGGCGTCGGGGCTGCGTGACGTGATCGAGCACGTCAAGAAAACGCCAGGTGCGGCCTTCATGCGGCGCGAGGATA
TCGCCCGTTACTGGATCGATCATCATGGCTGA

Upstream 100 bases:

>100_bases
GGATCGCGCGCGACACGGGCTGGCAGCCACGCAGCGCCAGGCAGTCGTTCCACGACTACATGGACTGGATCGTCGAGAAC
GAAAATCAGAGCGAGGGAAA

Downstream 100 bases:

>100_bases
CGGCACGCATGCACTGCCGAATGGCCATTTGCCCGCCGAGGCGAAAACGATGAGCGGCGCCGAATATGTTGCAGGGGTCC
TGAAGGAGGAAGGCGTCAAG

Product: putative polysaccharide deacetylase

Products: NA

Alternate protein names: Urate Catabolism Protein; Polysaccharide Deacetylase Family Protein; Chitin Deacetylase; Xylanase/Chitin Deacetylase; Chitooligosaccharide Deacetylase; Polysaccharide Deacetylase Family; Chitooligosaccharide Deacetylase Protein; Polysaccharide Deacetylase Protein Pda4B; Carbohydrate Esterase Family 4 Domain Protein; Chitinase; Deacetylase Protein; Allantoinase; Uricase; Polysaccharide Deacetylase Domain Protein; Hydrolase; Deacetylase

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MMSAAAKDQSRDFVGYGPNPPVISWPGGVTLAINLVLNYEEGAEYSWLEDGRNDNWGEYNIPNSPPLRDLGTETHFEYGS
RAGVWRLARLFDRYDIPVTISACAVALEKNPAVVDWMNARGHDLLGHGLRWSEYSGMPRDEEERQLHEALALYEKLTGIR
PLGWNCRSFPSVNTRDLIVREGGFLYYSDPCNDDLPYFLDHEGTKLLVVPYSKTLNDSRYLIAPGYSNPRDFAEDCRSAI
DYMIGEADETGGRMLTIGVHARWMGQPNRASGLRDVIEHVKKTPGAAFMRREDIARYWIDHHG

Sequences:

>Translated_303_residues
MMSAAAKDQSRDFVGYGPNPPVISWPGGVTLAINLVLNYEEGAEYSWLEDGRNDNWGEYNIPNSPPLRDLGTETHFEYGS
RAGVWRLARLFDRYDIPVTISACAVALEKNPAVVDWMNARGHDLLGHGLRWSEYSGMPRDEEERQLHEALALYEKLTGIR
PLGWNCRSFPSVNTRDLIVREGGFLYYSDPCNDDLPYFLDHEGTKLLVVPYSKTLNDSRYLIAPGYSNPRDFAEDCRSAI
DYMIGEADETGGRMLTIGVHARWMGQPNRASGLRDVIEHVKKTPGAAFMRREDIARYWIDHHG
>Mature_303_residues
MMSAAAKDQSRDFVGYGPNPPVISWPGGVTLAINLVLNYEEGAEYSWLEDGRNDNWGEYNIPNSPPLRDLGTETHFEYGS
RAGVWRLARLFDRYDIPVTISACAVALEKNPAVVDWMNARGHDLLGHGLRWSEYSGMPRDEEERQLHEALALYEKLTGIR
PLGWNCRSFPSVNTRDLIVREGGFLYYSDPCNDDLPYFLDHEGTKLLVVPYSKTLNDSRYLIAPGYSNPRDFAEDCRSAI
DYMIGEADETGGRMLTIGVHARWMGQPNRASGLRDVIEHVKKTPGAAFMRREDIARYWIDHHG

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34331; Mature: 34331

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSAAAKDQSRDFVGYGPNPPVISWPGGVTLAINLVLNYEEGAEYSWLEDGRNDNWGEYN
CCCCCCCCCCCCEECCCCCCCEEECCCCEEEEEEEEEECCCCCCCCHHHCCCCCCCCCCC
IPNSPPLRDLGTETHFEYGSRAGVWRLARLFDRYDIPVTISACAVALEKNPAVVDWMNAR
CCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEHHHHEEEECCCCCEEEECCCC
GHDLLGHGLRWSEYSGMPRDEEERQLHEALALYEKLTGIRPLGWNCRSFPSVNTRDLIVR
CCHHHCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEE
EGGFLYYSDPCNDDLPYFLDHEGTKLLVVPYSKTLNDSRYLIAPGYSNPRDFAEDCRSAI
CCCEEEECCCCCCCCCEEECCCCCEEEEEECCCCCCCCEEEEECCCCCHHHHHHHHHHHH
DYMIGEADETGGRMLTIGVHARWMGQPNRASGLRDVIEHVKKTPGAAFMRREDIARYWID
HHHHCCCCCCCCEEEEEEEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
HHG
CCC
>Mature Secondary Structure
MMSAAAKDQSRDFVGYGPNPPVISWPGGVTLAINLVLNYEEGAEYSWLEDGRNDNWGEYN
CCCCCCCCCCCCEECCCCCCCEEECCCCEEEEEEEEEECCCCCCCCHHHCCCCCCCCCCC
IPNSPPLRDLGTETHFEYGSRAGVWRLARLFDRYDIPVTISACAVALEKNPAVVDWMNAR
CCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEHHHHEEEECCCCCEEEECCCC
GHDLLGHGLRWSEYSGMPRDEEERQLHEALALYEKLTGIRPLGWNCRSFPSVNTRDLIVR
CCHHHCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEE
EGGFLYYSDPCNDDLPYFLDHEGTKLLVVPYSKTLNDSRYLIAPGYSNPRDFAEDCRSAI
CCCEEEECCCCCCCCCEEECCCCCEEEEEECCCCCCCCEEEEECCCCCHHHHHHHHHHHH
DYMIGEADETGGRMLTIGVHARWMGQPNRASGLRDVIEHVKKTPGAAFMRREDIARYWID
HHHHCCCCCCCCEEEEEEEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
HHG
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA