Definition Rhizobium leguminosarum bv. viciae 3841 plasmid pRL12, complete sequence.
Accession NC_008378
Length 870,021

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The map label for this gene is 116248760

Identifier: 116248760

GI number: 116248760

Start: 81718

End: 82224

Strand: Reverse

Name: 116248760

Synonym: pRL120084

Alternate gene names: NA

Gene position: 82224-81718 (Counterclockwise)

Preceding gene: 116248761

Following gene: 116248759

Centisome position: 9.45

GC content: 63.91

Gene sequence:

>507_bases
ATGACCCTTTTGCCGATCGCGCTCGGCGGGACCGAACTGGTCGCGTGGCGGCTCGACCAGGCCGTCCATGCGCCGACTTG
GGATAGCGGAGAAGGCGCCTATCGGGTTGGCGGCCGCTGGAACAGCAAGGGGGTGCGCGCGGTCTACTGCTCGCTCGATC
CCGCGACGGCGATCCTTGAAGTCGCGGTCCATAAGGGGTTCCGGGCGCTCGACACCGTGACGCACAGGATGACGGCAGCT
GTCATTGCCGATGCTGGCGATATCCATGTTGTCGATCCGGGAAACGTGCCCAATCCCAACTGGTTGCGCCCGGGCATTCC
CAGCGCCGGACAGCAGGCCTTCGGAGACGATTTGCTTCGACAGCATCGTTTCGTGGCAATCCCGAGCGCGGTCTCGCGGC
ATAGCTGGAACCTGATTTTTCTGGCAGGCGGCGCAACGGGCGCCTATGCGCTGAAGTTCCAGGAGGCTTTTGCCCTCGAT
ACACGGCTGCATCCGCCCACGTCATGA

Upstream 100 bases:

>100_bases
TCGGACTTGAGCAGCGCCGCCCGATCGATCTTCTCGGGACGCCCGCCGGCGTCGAGCTTGTCGAGGATCATCTCGATCGC
CTGGAATACGGCGTCTATGC

Downstream 100 bases:

>100_bases
ACGTCTTGGAGCCACGGGGATATTTGGAAGGGACCGAATCTCAATGTCAAATATTGACATAGCGACCCGGATGCAGAACA
ATTTCAGGAATTTGATAAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 168; Mature: 167

Protein sequence:

>168_residues
MTLLPIALGGTELVAWRLDQAVHAPTWDSGEGAYRVGGRWNSKGVRAVYCSLDPATAILEVAVHKGFRALDTVTHRMTAA
VIADAGDIHVVDPGNVPNPNWLRPGIPSAGQQAFGDDLLRQHRFVAIPSAVSRHSWNLIFLAGGATGAYALKFQEAFALD
TRLHPPTS

Sequences:

>Translated_168_residues
MTLLPIALGGTELVAWRLDQAVHAPTWDSGEGAYRVGGRWNSKGVRAVYCSLDPATAILEVAVHKGFRALDTVTHRMTAA
VIADAGDIHVVDPGNVPNPNWLRPGIPSAGQQAFGDDLLRQHRFVAIPSAVSRHSWNLIFLAGGATGAYALKFQEAFALD
TRLHPPTS
>Mature_167_residues
TLLPIALGGTELVAWRLDQAVHAPTWDSGEGAYRVGGRWNSKGVRAVYCSLDPATAILEVAVHKGFRALDTVTHRMTAAV
IADAGDIHVVDPGNVPNPNWLRPGIPSAGQQAFGDDLLRQHRFVAIPSAVSRHSWNLIFLAGGATGAYALKFQEAFALDT
RLHPPTS

Specific function: Unknown

COG id: COG5654

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18014; Mature: 17882

Theoretical pI: Translated: 7.81; Mature: 7.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLLPIALGGTELVAWRLDQAVHAPTWDSGEGAYRVGGRWNSKGVRAVYCSLDPATAILE
CEEEEEEECCCEEEEEECCCHHCCCCCCCCCCEEEECCEECCCCEEEEEEECCHHHHHHH
VAVHKGFRALDTVTHRMTAAVIADAGDIHVVDPGNVPNPNWLRPGIPSAGQQAFGDDLLR
HHHHCCCHHHHHHHHHHHHHEEECCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHH
QHRFVAIPSAVSRHSWNLIFLAGGATGAYALKFQEAFALDTRLHPPTS
HCCEEECCCHHCCCCCCEEEEECCCCCEEEEEEHHHHEECCCCCCCCC
>Mature Secondary Structure 
TLLPIALGGTELVAWRLDQAVHAPTWDSGEGAYRVGGRWNSKGVRAVYCSLDPATAILE
EEEEEEECCCEEEEEECCCHHCCCCCCCCCCEEEECCEECCCCEEEEEEECCHHHHHHH
VAVHKGFRALDTVTHRMTAAVIADAGDIHVVDPGNVPNPNWLRPGIPSAGQQAFGDDLLR
HHHHCCCHHHHHHHHHHHHHEEECCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHH
QHRFVAIPSAVSRHSWNLIFLAGGATGAYALKFQEAFALDTRLHPPTS
HCCEEECCCHHCCCCCCEEEEECCCCCEEEEEEHHHHEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA