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The map label for this gene is 116248741

Identifier: 116248741

GI number: 116248741

Start: 65328

End: 66179

Strand: Reverse

Name: 116248741

Synonym: pRL120065

Alternate gene names: NA

Gene position: 66179-65328 (Counterclockwise)

Preceding gene: 116248745

Following gene: 116248740

Centisome position: 7.61

GC content: 60.56

Gene sequence:

>852_bases
ATGACGACCATTTCCGCTGCAACATCAGTCTCTTCCTATTCCTATAGCAAGTACCCGACATCCGCGTCCGAGGAGATCCT
ATCCTCTAATACGGTTTCGTCGGCAAAAGCAACCAAAAGCGGGCAGCTCGATGAAGACACGTCCAGCAGCGCCGACAAAC
TCCTGTCCCAACTGATGACGCTGTCGATGAATCGCTTCTCCGATCAGTCGGTATCCGGCGAGGATGAGGATGGCGGCGAA
GGCATGGATGTTGCCCAATTGGACAGCGATGGCGACGGCTACGTGACTAAGGCCGAGTTCGTCGCGGCCCGGCCGTCCGA
CGTGACGGAGGACCAGGCCAACACGCTTTTCGGCAGCTTCGACAGCGAAAGCACTGGCTCGCTATCGGTCGATGTGCTCG
CCGAGGCCATGTCCGCTCAGCAGTCGCAACGCCCCGGCGGCGACGATCTTGCATCCCTGCTCTCCGATCTCGATACCGAT
GGCGACGGCTCCATCAGCAAGGACGAGTTCGTCGCAGGCCGGCCCTCCGATGTGACGGAAGACCAGGCCGGCACGCTTTT
CGACAGCTTCGACAGCGAAGGAGCGGGTTCGCTATCGGTCGATGAGCTGACCGAGGCCATGTCGGCCGAGCAGTCGCAAC
GTTCCGAAGGACCGCCACCGCCGCCGCCCGCAGAAGACGACGAGTCTCAATCCTTGCTCTCCGATCTCGATACGAATGGA
GACGGGCTCGTGACATTGGACGAGTTCATGGCAGGCAAGCCCGAGGACGTCACCGAAAGCCAGGCGAGCCAGCTCTTTAG
TCTGCTCGACACATCCGACACCGGTTCATTGTCCGTACAGTCCGCGGGCTGA

Upstream 100 bases:

>100_bases
AGGGGCAATTTTTTCGGTTGTGGCATTAGTGATTTCGATTTAGAGAACTGATCAGTTCTGTAATGCGTTGCATCCTCACC
CTCCTAGCGATGGAGCGCTT

Downstream 100 bases:

>100_bases
CGGCGGATACGGAGCGTCGCCATTGCAGTTGCTGGAGAAGCTGCAATGAGACGATCTGAAAGCGGCCCGGCCGTGGAGCT
GGCAGAGCCTTCAGCCGGGC

Product: putative symbiosis-related calsymin

Products: NA

Alternate protein names: Symbiosis-Related Calsymin

Number of amino acids: Translated: 283; Mature: 282

Protein sequence:

>283_residues
MTTISAATSVSSYSYSKYPTSASEEILSSNTVSSAKATKSGQLDEDTSSSADKLLSQLMTLSMNRFSDQSVSGEDEDGGE
GMDVAQLDSDGDGYVTKAEFVAARPSDVTEDQANTLFGSFDSESTGSLSVDVLAEAMSAQQSQRPGGDDLASLLSDLDTD
GDGSISKDEFVAGRPSDVTEDQAGTLFDSFDSEGAGSLSVDELTEAMSAEQSQRSEGPPPPPPAEDDESQSLLSDLDTNG
DGLVTLDEFMAGKPEDVTESQASQLFSLLDTSDTGSLSVQSAG

Sequences:

>Translated_283_residues
MTTISAATSVSSYSYSKYPTSASEEILSSNTVSSAKATKSGQLDEDTSSSADKLLSQLMTLSMNRFSDQSVSGEDEDGGE
GMDVAQLDSDGDGYVTKAEFVAARPSDVTEDQANTLFGSFDSESTGSLSVDVLAEAMSAQQSQRPGGDDLASLLSDLDTD
GDGSISKDEFVAGRPSDVTEDQAGTLFDSFDSEGAGSLSVDELTEAMSAEQSQRSEGPPPPPPAEDDESQSLLSDLDTNG
DGLVTLDEFMAGKPEDVTESQASQLFSLLDTSDTGSLSVQSAG
>Mature_282_residues
TTISAATSVSSYSYSKYPTSASEEILSSNTVSSAKATKSGQLDEDTSSSADKLLSQLMTLSMNRFSDQSVSGEDEDGGEG
MDVAQLDSDGDGYVTKAEFVAARPSDVTEDQANTLFGSFDSESTGSLSVDVLAEAMSAQQSQRPGGDDLASLLSDLDTDG
DGSISKDEFVAGRPSDVTEDQAGTLFDSFDSEGAGSLSVDELTEAMSAEQSQRSEGPPPPPPAEDDESQSLLSDLDTNGD
GLVTLDEFMAGKPEDVTESQASQLFSLLDTSDTGSLSVQSAG

Specific function: Unknown

COG id: COG5126

COG function: function code TZDR; Ca2+-binding protein (EF-Hand superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29345; Mature: 29214

Theoretical pI: Translated: 3.42; Mature: 3.42

Prosite motif: PS00018 EF_HAND_1 ; PS50222 EF_HAND_2 L=RR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTISAATSVSSYSYSKYPTSASEEILSSNTVSSAKATKSGQLDEDTSSSADKLLSQLMT
CCCCCCHHHHHHCCCCCCCCCHHHHHHHCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHH
LSMNRFSDQSVSGEDEDGGEGMDVAQLDSDGDGYVTKAEFVAARPSDVTEDQANTLFGSF
HHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEHHHHEECCCCCCCHHHHHHHCCCC
DSESTGSLSVDVLAEAMSAQQSQRPGGDDLASLLSDLDTDGDGSISKDEFVAGRPSDVTE
CCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
DQAGTLFDSFDSEGAGSLSVDELTEAMSAEQSQRSEGPPPPPPAEDDESQSLLSDLDTNG
CCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCC
DGLVTLDEFMAGKPEDVTESQASQLFSLLDTSDTGSLSVQSAG
CCEEEHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCC
>Mature Secondary Structure 
TTISAATSVSSYSYSKYPTSASEEILSSNTVSSAKATKSGQLDEDTSSSADKLLSQLMT
CCCCCHHHHHHCCCCCCCCCHHHHHHHCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHH
LSMNRFSDQSVSGEDEDGGEGMDVAQLDSDGDGYVTKAEFVAARPSDVTEDQANTLFGSF
HHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEHHHHEECCCCCCCHHHHHHHCCCC
DSESTGSLSVDVLAEAMSAQQSQRPGGDDLASLLSDLDTDGDGSISKDEFVAGRPSDVTE
CCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
DQAGTLFDSFDSEGAGSLSVDELTEAMSAEQSQRSEGPPPPPPAEDDESQSLLSDLDTNG
CCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCC
DGLVTLDEFMAGKPEDVTESQASQLFSLLDTSDTGSLSVQSAG
CCEEEHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA