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The map label for this gene is stbB [H]

Identifier: 116248733

GI number: 116248733

Start: 57726

End: 58136

Strand: Direct

Name: stbB [H]

Synonym: pRL120057

Alternate gene names: 116248733

Gene position: 57726-58136 (Clockwise)

Preceding gene: 116248731

Following gene: 116248742

Centisome position: 6.64

GC content: 55.96

Gene sequence:

>411_bases
TTGATCTTTCTCGATACCAACGTCATATCGGAAACCCTAAAAAAGTCGCCCGACGAGGCCGTGATTGCATGGCTGGTCCG
TCATGATGCAGAATTGGCGTTACCGACGGTGACAATTGCGGAAATAGCTTTTGGTATCCAGAAGATCCGCGATCAGCGAG
CCGAACGCCTCGAACAGGGGCTGTCCGACTGGCGCCGTCGCTTCGCGGACCGGATTTTCGGTCTGACCGAAGAGGCAGCT
CTTGCTTATGGCGACATTATGGGCCTTGCTGCTCGTCAAGGGCGTGGAATGTCGGCTCCGGATGGCATGATAGCCGCTAT
TGCGCGGGTTAATGGCGGTCGACTTGCGACGCGAGACCTGGGGGACTTTGCGACCACAGGCCTTGAGCTGATTTCACCAT
GGCAATTTTGA

Upstream 100 bases:

>100_bases
CCACGACCTTCTATGCTCGTCTTTTGCAGCAAAGTGGCACGGATATCGACCTTGAATCAGTTATCAAAGAGGACAGGCAG
GAGCACAAGGGCATCGAACT

Downstream 100 bases:

>100_bases
ATTCCCGAAACATGCTTGGCGCTCGTAGCTGAGAGGCCTTTCAAGCCAAGCGCAGGAGCTTTTCGTTCAGGCCGCTGATC
TCGCGCAGGAGCTCGACCAA

Product: putative plasmid stability protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MIFLDTNVISETLKKSPDEAVIAWLVRHDAELALPTVTIAEIAFGIQKIRDQRAERLEQGLSDWRRRFADRIFGLTEEAA
LAYGDIMGLAARQGRGMSAPDGMIAAIARVNGGRLATRDLGDFATTGLELISPWQF

Sequences:

>Translated_136_residues
MIFLDTNVISETLKKSPDEAVIAWLVRHDAELALPTVTIAEIAFGIQKIRDQRAERLEQGLSDWRRRFADRIFGLTEEAA
LAYGDIMGLAARQGRGMSAPDGMIAAIARVNGGRLATRDLGDFATTGLELISPWQF
>Mature_136_residues
MIFLDTNVISETLKKSPDEAVIAWLVRHDAELALPTVTIAEIAFGIQKIRDQRAERLEQGLSDWRRRFADRIFGLTEEAA
LAYGDIMGLAARQGRGMSAPDGMIAAIARVNGGRLATRDLGDFATTGLELISPWQF

Specific function: Involved in plasmid stability [H]

COG id: COG1487

COG function: function code R; Predicted nucleic acid-binding protein, contains PIN domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002716 [H]

Pfam domain/function: PF01850 PIN [H]

EC number: NA

Molecular weight: Translated: 14987; Mature: 14987

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFLDTNVISETLKKSPDEAVIAWLVRHDAELALPTVTIAEIAFGIQKIRDQRAERLEQG
CEEECHHHHHHHHHCCCHHHHHHHHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH
LSDWRRRFADRIFGLTEEAALAYGDIMGLAARQGRGMSAPDGMIAAIARVNGGRLATRDL
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCEEEHHHH
GDFATTGLELISPWQF
HHHHHHHHHHCCCCCC
>Mature Secondary Structure
MIFLDTNVISETLKKSPDEAVIAWLVRHDAELALPTVTIAEIAFGIQKIRDQRAERLEQG
CEEECHHHHHHHHHCCCHHHHHHHHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH
LSDWRRRFADRIFGLTEEAALAYGDIMGLAARQGRGMSAPDGMIAAIARVNGGRLATRDL
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCEEEHHHH
GDFATTGLELISPWQF
HHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9326365; 12928499 [H]