| Definition | Rhizobium leguminosarum bv. viciae 3841 plasmid pRL12, complete sequence. |
|---|---|
| Accession | NC_008378 |
| Length | 870,021 |
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The map label for this gene is artJ [C]
Identifier: 116248724
GI number: 116248724
Start: 48059
End: 48907
Strand: Direct
Name: artJ [C]
Synonym: pRL120048
Alternate gene names: 116248724
Gene position: 48059-48907 (Clockwise)
Preceding gene: 116248723
Following gene: 116248725
Centisome position: 5.52
GC content: 63.84
Gene sequence:
>849_bases ATGAAAACAGGATATTTTTTGTGCGCCGCCAGCCTGTCGGTGCTTCTGGTCACGGCGGTCGCCCCGGCGTCCGCCGCCGA TGACAAGCTCGAGCAGCTGAAGGAGCAAGGCTTTGCGCGTATCGCCATCGCCAACGAGCCGCCGTTCACCGCTGTCGGCG CCGACGGCAAGGTGTCCGGCGCTGCCCCCGATGTGGCGCGCGCAATCTTCGAAAAGCTGGGCGTCAAGGAAGTGGTCGCC TCGATCTCGGAATATGGCGCAATGATCCCCGGCCTGCAGGCCGGCCGCCACGACGCGATCACCGCAGGCCTCTTCATGAA GCCTGAGCGCTGCAACGCCGTCGCCTATTCCGAACCGATCCTTTGCGACGCTGAAGCTTTCGCGCTCAAGAAGGGCAACC CACTGAAGCTGACGAGCTACAAGGACATCGCCGACAATCCGGACGCCAAGATCGGCGCGCCGGGCGGCGGCACCGAGGAG AAGCTGGCGCTCGAGGCCGGCGTGCCGCGCGACCGCGTCATCGTCGTTCCTGATGGCCAGAGCGGCATCAAGATGCTGCA GGACGGCCGCATCGACGTCTACTCGCTGCCGGTTCTGTCGATCCACGATCTGATGGCCAAGGCGAACGATCCGAACCTTG AAACCGTCGCACCCGTCGTCAATGCGCCGGTCTATTGCGATGGTGCGGCTTTCCGCAAGCAGGACGTTGCGCTCCGCGAC GCCTTCGACGTCGAGCTGAAGAAGCTGAAGGAATCCGGCGAATTCGCCAAGATCATCGAGCCCTACGGCTTCTCGGCGAA GGCGGCGATGTCGACGAGCCGCGAAAAGCTCTGCGCTGCGGCGAAGTAA
Upstream 100 bases:
>100_bases AGACCTTCCTGCGCAAGATCATTGCGGCGGGGCACCGCATCTGACCTCAGACATTGCCCGCAAGAACAAAACTCAAGGAA AATCAGAGGAGTTGGGAACG
Downstream 100 bases:
>100_bases CAAAGGGTAAGCAACCGGCCATGCCCCAGGCGTGGCCGGATCGCCCTCGAACGATCTCCCAAAGCGCGTCGCGATCTTTC AGATGCACTCCTCGCGCTTT
Product: putative substrate-binding component of ABC transporter
Products: ADP; phosphate; L-arginine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 282; Mature: 282
Protein sequence:
>282_residues MKTGYFLCAASLSVLLVTAVAPASAADDKLEQLKEQGFARIAIANEPPFTAVGADGKVSGAAPDVARAIFEKLGVKEVVA SISEYGAMIPGLQAGRHDAITAGLFMKPERCNAVAYSEPILCDAEAFALKKGNPLKLTSYKDIADNPDAKIGAPGGGTEE KLALEAGVPRDRVIVVPDGQSGIKMLQDGRIDVYSLPVLSIHDLMAKANDPNLETVAPVVNAPVYCDGAAFRKQDVALRD AFDVELKKLKESGEFAKIIEPYGFSAKAAMSTSREKLCAAAK
Sequences:
>Translated_282_residues MKTGYFLCAASLSVLLVTAVAPASAADDKLEQLKEQGFARIAIANEPPFTAVGADGKVSGAAPDVARAIFEKLGVKEVVA SISEYGAMIPGLQAGRHDAITAGLFMKPERCNAVAYSEPILCDAEAFALKKGNPLKLTSYKDIADNPDAKIGAPGGGTEE KLALEAGVPRDRVIVVPDGQSGIKMLQDGRIDVYSLPVLSIHDLMAKANDPNLETVAPVVNAPVYCDGAAFRKQDVALRD AFDVELKKLKESGEFAKIIEPYGFSAKAAMSTSREKLCAAAK >Mature_282_residues MKTGYFLCAASLSVLLVTAVAPASAADDKLEQLKEQGFARIAIANEPPFTAVGADGKVSGAAPDVARAIFEKLGVKEVVA SISEYGAMIPGLQAGRHDAITAGLFMKPERCNAVAYSEPILCDAEAFALKKGNPLKLTSYKDIADNPDAKIGAPGGGTEE KLALEAGVPRDRVIVVPDGQSGIKMLQDGRIDVYSLPVLSIHDLMAKANDPNLETVAPVVNAPVYCDGAAFRKQDVALRD AFDVELKKLKESGEFAKIIEPYGFSAKAAMSTSREKLCAAAK
Specific function: Probably part of the binding-protein-dependent transport system y4tEFGH for an amino acid [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1787085, Length=222, Percent_Identity=24.7747747747748, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1787088, Length=225, Percent_Identity=24.8888888888889, Blast_Score=65, Evalue=4e-12, Organism=Escherichia coli, GI1788228, Length=232, Percent_Identity=28.448275862069, Blast_Score=62, Evalue=4e-11,
Paralogues:
None
Copy number: 1180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014337 - InterPro: IPR001638 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 29682; Mature: 29682
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTGYFLCAASLSVLLVTAVAPASAADDKLEQLKEQGFARIAIANEPPFTAVGADGKVSG CCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEECCCCCCEEECCCCCCCC AAPDVARAIFEKLGVKEVVASISEYGAMIPGLQAGRHDAITAGLFMKPERCNAVAYSEPI CCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCEEECEEECCHHCCEEECCCCE LCDAEAFALKKGNPLKLTSYKDIADNPDAKIGAPGGGTEEKLALEAGVPRDRVIVVPDGQ EECCHHHEECCCCCEEEECCCCCCCCCCCEEECCCCCCCCEEEEECCCCCCEEEEEECCC SGIKMLQDGRIDVYSLPVLSIHDLMAKANDPNLETVAPVVNAPVYCDGAAFRKQDVALRD HHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCCHHHHHHHCCCEEECCCHHHHHCHHHHH AFDVELKKLKESGEFAKIIEPYGFSAKAAMSTSREKLCAAAK HHHHHHHHHHHCCCEEEHHCCCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MKTGYFLCAASLSVLLVTAVAPASAADDKLEQLKEQGFARIAIANEPPFTAVGADGKVSG CCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEECCCCCCEEECCCCCCCC AAPDVARAIFEKLGVKEVVASISEYGAMIPGLQAGRHDAITAGLFMKPERCNAVAYSEPI CCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCEEECEEECCHHCCEEECCCCE LCDAEAFALKKGNPLKLTSYKDIADNPDAKIGAPGGGTEEKLALEAGVPRDRVIVVPDGQ EECCHHHEECCCCCEEEECCCCCCCCCCCEEECCCCCCCCEEEEECCCCCCEEEEEECCC SGIKMLQDGRIDVYSLPVLSIHDLMAKANDPNLETVAPVVNAPVYCDGAAFRKQDVALRD HHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCCHHHHHHHCCCEEECCCHHHHHCHHHHH AFDVELKKLKESGEFAKIIEPYGFSAKAAMSTSREKLCAAAK HHHHHHHHHHHCCCEEEHHCCCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-arginine [Periplasm]; H2O [C]
Specific reaction: ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]