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The map label for this gene is yogA [H]

Identifier: 116248718

GI number: 116248718

Start: 40981

End: 42054

Strand: Reverse

Name: yogA [H]

Synonym: pRL120042

Alternate gene names: 116248718

Gene position: 42054-40981 (Counterclockwise)

Preceding gene: 116248719

Following gene: 116248717

Centisome position: 4.83

GC content: 64.8

Gene sequence:

>1074_bases
ATGACGATCCCGGAAAAGATGGCGGCGGTATTGCTCACCGGCCATGGCGGGTTGGACAAGCTCGTCTATGACAGGGAGGT
GCCCGTCCCGAGACCTGCGGACGGCGAGGTGCTGATCCGCGTCACGGCCTGCGGCATGAACAATACCGACGTCTGGGTCC
GCCAAGGCGCCTACGGCACCGAGGACGATCCGTCTGCCGTCTCCACATGGCGCAGGCAAGGCAATACACTGACATTCCCA
CGCATCCAGGGCACCGATACGGTCGGCCATATTGTCGGCGTCGGCGCCGGCGTTAATCCGGCGCGCATCGGCGAGCGCGT
CATGGTCGACTTCTCAATCTACAACCGGGACGACGACAGCCTCGCCGACATCGATTACATGGGCCATGGCCGCGACGGCG
GTTATGCCGAATACATGGCACTGCCGGCCGAGAACGCCCATGTCGTCGCAACCGATCTGACCGACGTCGAACTCGCCACC
TTCTGCTGCGCCTATCTGACCGGCGAGCGTATGCTGGAACGGGCAAGGCTTGTCGCCGGTGAACGCGTCCTGGTGACCGG
CGCCTCGGGTGGCGTCGGCTCGGCGATCATCCAGCTCGCACGTGCCCGCAGCGCCATCCCGATCGCGGTCGCCGGCCCCG
GCAAGGAGGCGGCGATGTTCGATATCGGCGCCGAAGCAGTCGTGACCCGCGGCAAGGGCGATCTCGTCGAAGCCGCCCAT
TCCGCCAGCCGTGGCCAGCCGATCGATGTCGTCGCCGATCTCGTCGGCGGACCGCTGTTCAACGATCTCCTGAAGATCCT
GCGCCCCGAAGGCCGCTACACGACAGCCGGCGCCATCGCCGGCCCGGTCGTTCAGCTCGATTTGCGGACCATGTACCTGA
AGCAGTTGGAACTGCACGGATCGAGCCAGGGAAGCCGCGCCGACTTCCGCCGGATCGTCGGCTATATCGAAAGCCGGAAA
ATCCGGCCTCTCGTCGGCGGCGTCTATCCGCTGTCGGAATTCCACCGCGCGCAGACCGATTTCATGGCGAAGAACTTCGT
GGGCAAATTGGTCGTCGTTCCCGACGAGACATGA

Upstream 100 bases:

>100_bases
CGCCGCTCTGCCTGACACGCGAGGAGGCCGACATCGTGGTCAAGGCCGCGGCGGATGCGATCGAAACCGTCTTCAAGAAC
ATCTGAGGAAGAAGCTCAAC

Downstream 100 bases:

>100_bases
TCCTTGCTTTCGCGGGCAACCTTATCGGGTTTGCAGCGTTTCACGGCCATGGAACATCATGATGGCACCGGGCTTTCGCT
GCGTCGGAATATTTCGCAGC

Product: putative alcohol dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 357; Mature: 356

Protein sequence:

>357_residues
MTIPEKMAAVLLTGHGGLDKLVYDREVPVPRPADGEVLIRVTACGMNNTDVWVRQGAYGTEDDPSAVSTWRRQGNTLTFP
RIQGTDTVGHIVGVGAGVNPARIGERVMVDFSIYNRDDDSLADIDYMGHGRDGGYAEYMALPAENAHVVATDLTDVELAT
FCCAYLTGERMLERARLVAGERVLVTGASGGVGSAIIQLARARSAIPIAVAGPGKEAAMFDIGAEAVVTRGKGDLVEAAH
SASRGQPIDVVADLVGGPLFNDLLKILRPEGRYTTAGAIAGPVVQLDLRTMYLKQLELHGSSQGSRADFRRIVGYIESRK
IRPLVGGVYPLSEFHRAQTDFMAKNFVGKLVVVPDET

Sequences:

>Translated_357_residues
MTIPEKMAAVLLTGHGGLDKLVYDREVPVPRPADGEVLIRVTACGMNNTDVWVRQGAYGTEDDPSAVSTWRRQGNTLTFP
RIQGTDTVGHIVGVGAGVNPARIGERVMVDFSIYNRDDDSLADIDYMGHGRDGGYAEYMALPAENAHVVATDLTDVELAT
FCCAYLTGERMLERARLVAGERVLVTGASGGVGSAIIQLARARSAIPIAVAGPGKEAAMFDIGAEAVVTRGKGDLVEAAH
SASRGQPIDVVADLVGGPLFNDLLKILRPEGRYTTAGAIAGPVVQLDLRTMYLKQLELHGSSQGSRADFRRIVGYIESRK
IRPLVGGVYPLSEFHRAQTDFMAKNFVGKLVVVPDET
>Mature_356_residues
TIPEKMAAVLLTGHGGLDKLVYDREVPVPRPADGEVLIRVTACGMNNTDVWVRQGAYGTEDDPSAVSTWRRQGNTLTFPR
IQGTDTVGHIVGVGAGVNPARIGERVMVDFSIYNRDDDSLADIDYMGHGRDGGYAEYMALPAENAHVVATDLTDVELATF
CCAYLTGERMLERARLVAGERVLVTGASGGVGSAIIQLARARSAIPIAVAGPGKEAAMFDIGAEAVVTRGKGDLVEAAHS
ASRGQPIDVVADLVGGPLFNDLLKILRPEGRYTTAGAIAGPVVQLDLRTMYLKQLELHGSSQGSRADFRRIVGYIESRKI
RPLVGGVYPLSEFHRAQTDFMAKNFVGKLVVVPDET

Specific function: Unknown

COG id: COG0604

COG function: function code CR; NADPH:quinone reductase and related Zn-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily [H]

Homologues:

Organism=Homo sapiens, GI22538446, Length=363, Percent_Identity=27.2727272727273, Blast_Score=104, Evalue=1e-22,
Organism=Homo sapiens, GI22538444, Length=363, Percent_Identity=27.2727272727273, Blast_Score=104, Evalue=1e-22,
Organism=Homo sapiens, GI24308257, Length=382, Percent_Identity=27.7486910994764, Blast_Score=103, Evalue=2e-22,
Organism=Homo sapiens, GI194239674, Length=356, Percent_Identity=24.1573033707865, Blast_Score=92, Evalue=8e-19,
Organism=Homo sapiens, GI13236495, Length=356, Percent_Identity=24.1573033707865, Blast_Score=92, Evalue=8e-19,
Organism=Homo sapiens, GI18379349, Length=375, Percent_Identity=25.3333333333333, Blast_Score=86, Evalue=8e-17,
Organism=Homo sapiens, GI194239676, Length=355, Percent_Identity=23.6619718309859, Blast_Score=79, Evalue=6e-15,
Organism=Escherichia coli, GI226510992, Length=178, Percent_Identity=25.8426966292135, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI1790485, Length=361, Percent_Identity=24.0997229916898, Blast_Score=65, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI17507255, Length=338, Percent_Identity=27.2189349112426, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17562582, Length=304, Percent_Identity=25, Blast_Score=71, Evalue=9e-13,
Organism=Caenorhabditis elegans, GI17562584, Length=325, Percent_Identity=24.6153846153846, Blast_Score=69, Evalue=3e-12,
Organism=Saccharomyces cerevisiae, GI6323961, Length=331, Percent_Identity=27.7945619335347, Blast_Score=98, Evalue=2e-21,
Organism=Saccharomyces cerevisiae, GI6324486, Length=332, Percent_Identity=28.9156626506024, Blast_Score=97, Evalue=4e-21,
Organism=Saccharomyces cerevisiae, GI6323729, Length=362, Percent_Identity=25.9668508287293, Blast_Score=94, Evalue=3e-20,
Organism=Saccharomyces cerevisiae, GI6319621, Length=326, Percent_Identity=26.9938650306748, Blast_Score=94, Evalue=4e-20,
Organism=Saccharomyces cerevisiae, GI6319520, Length=364, Percent_Identity=23.9010989010989, Blast_Score=94, Evalue=4e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013149
- InterPro:   IPR013154
- InterPro:   IPR002085
- InterPro:   IPR011032
- InterPro:   IPR016040 [H]

Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]

EC number: NA

Molecular weight: Translated: 38205; Mature: 38074

Theoretical pI: Translated: 5.68; Mature: 5.68

Prosite motif: PS01162 QOR_ZETA_CRYSTAL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIPEKMAAVLLTGHGGLDKLVYDREVPVPRPADGEVLIRVTACGMNNTDVWVRQGAYGT
CCCHHHEEEEEEECCCCCHHHEECCCCCCCCCCCCCEEEEEEECCCCCCCEEEECCCCCC
EDDPSAVSTWRRQGNTLTFPRIQGTDTVGHIVGVGAGVNPARIGERVMVDFSIYNRDDDS
CCCHHHHHHHHHCCCEEECCCCCCCCCHHHEEECCCCCCHHHCCCEEEEEEEEECCCCCC
LADIDYMGHGRDGGYAEYMALPAENAHVVATDLTDVELATFCCAYLTGERMLERARLVAG
CCCEEECCCCCCCCEEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCC
ERVLVTGASGGVGSAIIQLARARSAIPIAVAGPGKEAAMFDIGAEAVVTRGKGDLVEAAH
CEEEEEECCCCHHHHHHHHHHHCCCCEEEEECCCCCCEEEECCCCEEEECCCCHHHHHHH
SASRGQPIDVVADLVGGPLFNDLLKILRPEGRYTTAGAIAGPVVQLDLRTMYLKQLELHG
HHCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCEEECCCCCCCEEEEHHHHHHHHHHHHCC
SSQGSRADFRRIVGYIESRKIRPLVGGVYPLSEFHRAQTDFMAKNFVGKLVVVPDET
CCCCCHHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCC
>Mature Secondary Structure 
TIPEKMAAVLLTGHGGLDKLVYDREVPVPRPADGEVLIRVTACGMNNTDVWVRQGAYGT
CCHHHEEEEEEECCCCCHHHEECCCCCCCCCCCCCEEEEEEECCCCCCCEEEECCCCCC
EDDPSAVSTWRRQGNTLTFPRIQGTDTVGHIVGVGAGVNPARIGERVMVDFSIYNRDDDS
CCCHHHHHHHHHCCCEEECCCCCCCCCHHHEEECCCCCCHHHCCCEEEEEEEEECCCCCC
LADIDYMGHGRDGGYAEYMALPAENAHVVATDLTDVELATFCCAYLTGERMLERARLVAG
CCCEEECCCCCCCCEEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCC
ERVLVTGASGGVGSAIIQLARARSAIPIAVAGPGKEAAMFDIGAEAVVTRGKGDLVEAAH
CEEEEEECCCCHHHHHHHHHHHCCCCEEEEECCCCCCEEEECCCCEEEECCCCHHHHHHH
SASRGQPIDVVADLVGGPLFNDLLKILRPEGRYTTAGAIAGPVVQLDLRTMYLKQLELHG
HHCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCEEECCCCCCCEEEEHHHHHHHHHHHHCC
SSQGSRADFRRIVGYIESRKIRPLVGGVYPLSEFHRAQTDFMAKNFVGKLVVVPDET
CCCCCHHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Zn [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]