Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is phnW2 [H]

Identifier: 115353246

GI number: 115353246

Start: 3532643

End: 3532948

Strand: Direct

Name: phnW2 [H]

Synonym: Bamb_3195

Alternate gene names: 115353246

Gene position: 3532643-3532948 (Clockwise)

Preceding gene: 115353243

Following gene: 115353247

Centisome position: 99.33

GC content: 67.32

Gene sequence:

>306_bases
ATGTACATGCAGCGCACGACGCAATGGCGCTTCACGGCGCCAACGCACGTGGTCGCGGCGCTCGACGCGGCTGTCGCGCA
ATACGTCGACGAAGGTGGGCTCGCCGCGCGGGGCGGACGGTTTTATCAAGAGGTCAAAAAGCGCGGCTACATTCTGTATC
CGGGCAAGCTGACCGAAGTCGAGACGTTCCGCGTCGGCTGCATCGGCCACTTCCCCGAAGCCGGCATTCCGGGCGCGGTC
GCCGCGATCGCCGACACGCTGAAGGCGATGGGCGTGCGCCGCGTGTCCGCCGATGCGTCGGCCTGA

Upstream 100 bases:

>100_bases
TTCCATGCTTGACATTAAAATTGATGATTTGTAGATTGTCAACAATAGGCAGAGAACAGAAAGCAGGAAGTGGAAGCATG
CGGATCGGTGCGACCAGCGG

Downstream 100 bases:

>100_bases
CGCGACGCACCCGGCCGCATCGCGGCGCGCGCCTCATCGCCGCGCGCCGTCGTGCGGCGGTTTCGCTTTCGTTTTCCCGC
CGTGCGCGGCACGGCAACCC

Product: 2-aminoethylphosphonate--pyruvate transaminase

Products: NA

Alternate protein names: 2-aminoethylphosphonate aminotransferase 2; AEP transaminase 2; AEPT 2 [H]

Number of amino acids: Translated: 101; Mature: 101

Protein sequence:

>101_residues
MYMQRTTQWRFTAPTHVVAALDAAVAQYVDEGGLAARGGRFYQEVKKRGYILYPGKLTEVETFRVGCIGHFPEAGIPGAV
AAIADTLKAMGVRRVSADASA

Sequences:

>Translated_101_residues
MYMQRTTQWRFTAPTHVVAALDAAVAQYVDEGGLAARGGRFYQEVKKRGYILYPGKLTEVETFRVGCIGHFPEAGIPGAV
AAIADTLKAMGVRRVSADASA
>Mature_101_residues
MYMQRTTQWRFTAPTHVVAALDAAVAQYVDEGGLAARGGRFYQEVKKRGYILYPGKLTEVETFRVGCIGHFPEAGIPGAV
AAIADTLKAMGVRRVSADASA

Specific function: Involved in phosphonate degradation [H]

COG id: COG0075

COG function: function code E; Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. PhnW subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017688
- InterPro:   IPR000192
- InterPro:   IPR012703
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00266 Aminotran_5 [H]

EC number: =2.6.1.37 [H]

Molecular weight: Translated: 10877; Mature: 10877

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYMQRTTQWRFTAPTHVVAALDAAVAQYVDEGGLAARGGRFYQEVKKRGYILYPGKLTEV
CCCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCEEECCCCCCCE
ETFRVGCIGHFPEAGIPGAVAAIADTLKAMGVRRVSADASA
EEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCHHCCCCCCC
>Mature Secondary Structure
MYMQRTTQWRFTAPTHVVAALDAAVAQYVDEGGLAARGGRFYQEVKKRGYILYPGKLTEV
CCCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCEEECCCCCCCE
ETFRVGCIGHFPEAGIPGAVAAIADTLKAMGVRRVSADASA
EEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA