Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115353241

Identifier: 115353241

GI number: 115353241

Start: 3527132

End: 3528181

Strand: Direct

Name: 115353241

Synonym: Bamb_3190

Alternate gene names: NA

Gene position: 3527132-3528181 (Clockwise)

Preceding gene: 115353238

Following gene: 115353243

Centisome position: 99.17

GC content: 68.29

Gene sequence:

>1050_bases
ATGGGACGTCGAACATGGAATCATGTGAGCGAGACGCGACCATTCAGAGGCCATGGTCACGCCGATATCGGTGCGCACGT
CGAGTCGCACCCTCCACCCGATCGCATCCGGATGCATCACACGACGCACGAAGCGAAGCCGGTCATGCTGCGTAAGGACG
CACTCGTCGCGTTCGCGCTCGGCATTGCGCTGCTCGTGGCCGCGGCCGCGCTCGCCGTCACCGCGGGCGGTGCGGCCGGC
CATCTGGTCCGCGCGCCGGGCACGGTCGTGCGCATCGTGCAGGACAGCGACGCGATGCGTGCATATCGCCCGATCGTCGC
CTATCTCGCGAACGACGGCCGGCGCCGCGAAGTCGCCGGCAATACCGCGTCGATGGTGCCGGCTTACGACATCGGCGAAA
GCGTCGACGTCCTGGTCGACCCCGACCATCCGAACCGTCCCGCGCTGATCGACGATTTCGCGCAACGCTGGTTTCCCGTC
GCGGTGCCCGCCCTGCTCGCGCTCGCGTCGCTTGCGATCGGCAGCCTGTTGTACGTGAACGAGCGCCGCAGCCGGCAAGC
CGACGCGTTTTCCGCACCGGCCGACCGCAAGACGATCCGGCGCCGCTGGAACATCGCGATCGTGCTGATCCCGATCGCGA
TCGGCACCGGTTTCCTGGCCGGCGCCGGCGCTGTCGGGCTGCGCCAGTGGCAGATCGACCGCCATTACGCGCGCTCGACC
GGCCATGTCGTCGAGATCGCCGAAACGGCCCACTCGCCGCCCGCCCGCACGTCGCTCTACTCGGTGAGCATCGCGTTCAA
GACCGACAGCGGCCGCCAGGTCACGTTCGCGCAAGGCTCGGCGTCATCGAATCCCGGGCTGTACGAAGGCGAGATCGTCG
ACGTGCTGTACGACCCCGTCACGCCCGAGCGCGCGCTCGTCGACCGGTTCTGGGACCGGTGGGCGCTCACGGCGATCCTG
TTCGCGATCGGCGCGCCGTTCCTGGTGGCAGGGTTGTTCATTGCCGGCACCCTATGGCCCGATCATCGGCCGCACGAAAT
CCCCGAATGA

Upstream 100 bases:

>100_bases
TACATACATGCCCCGCTCCCGCGCTTTCCCGCTAGAATCATCCGACAAATATCACACAACCGGCCGGTGATCGCCGTATC
GCCGCCGGCACTGAGAGAGC

Downstream 100 bases:

>100_bases
CGCACGGCGAACCGGGGCCGCGACGCCGCTGCCCCCGCCTCACCGCTCCCTGAACGCCTCCACCTTCGCGCGGTTCCCGC
ACGTACGCATGTCGCACCAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 349; Mature: 348

Protein sequence:

>349_residues
MGRRTWNHVSETRPFRGHGHADIGAHVESHPPPDRIRMHHTTHEAKPVMLRKDALVAFALGIALLVAAAALAVTAGGAAG
HLVRAPGTVVRIVQDSDAMRAYRPIVAYLANDGRRREVAGNTASMVPAYDIGESVDVLVDPDHPNRPALIDDFAQRWFPV
AVPALLALASLAIGSLLYVNERRSRQADAFSAPADRKTIRRRWNIAIVLIPIAIGTGFLAGAGAVGLRQWQIDRHYARST
GHVVEIAETAHSPPARTSLYSVSIAFKTDSGRQVTFAQGSASSNPGLYEGEIVDVLYDPVTPERALVDRFWDRWALTAIL
FAIGAPFLVAGLFIAGTLWPDHRPHEIPE

Sequences:

>Translated_349_residues
MGRRTWNHVSETRPFRGHGHADIGAHVESHPPPDRIRMHHTTHEAKPVMLRKDALVAFALGIALLVAAAALAVTAGGAAG
HLVRAPGTVVRIVQDSDAMRAYRPIVAYLANDGRRREVAGNTASMVPAYDIGESVDVLVDPDHPNRPALIDDFAQRWFPV
AVPALLALASLAIGSLLYVNERRSRQADAFSAPADRKTIRRRWNIAIVLIPIAIGTGFLAGAGAVGLRQWQIDRHYARST
GHVVEIAETAHSPPARTSLYSVSIAFKTDSGRQVTFAQGSASSNPGLYEGEIVDVLYDPVTPERALVDRFWDRWALTAIL
FAIGAPFLVAGLFIAGTLWPDHRPHEIPE
>Mature_348_residues
GRRTWNHVSETRPFRGHGHADIGAHVESHPPPDRIRMHHTTHEAKPVMLRKDALVAFALGIALLVAAAALAVTAGGAAGH
LVRAPGTVVRIVQDSDAMRAYRPIVAYLANDGRRREVAGNTASMVPAYDIGESVDVLVDPDHPNRPALIDDFAQRWFPVA
VPALLALASLAIGSLLYVNERRSRQADAFSAPADRKTIRRRWNIAIVLIPIAIGTGFLAGAGAVGLRQWQIDRHYARSTG
HVVEIAETAHSPPARTSLYSVSIAFKTDSGRQVTFAQGSASSNPGLYEGEIVDVLYDPVTPERALVDRFWDRWALTAILF
AIGAPFLVAGLFIAGTLWPDHRPHEIPE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37908; Mature: 37776

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRRTWNHVSETRPFRGHGHADIGAHVESHPPPDRIRMHHTTHEAKPVMLRKDALVAFAL
CCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCHHHEEEECCCCCCCCEEEEHHHHHHHHH
GIALLVAAAALAVTAGGAAGHLVRAPGTVVRIVQDSDAMRAYRPIVAYLANDGRRREVAG
HHHHHHHHHHHHHHCCCCCCCEEECCCEEEEEEECCCHHHHHHHHHHHHHCCCCEEECCC
NTASMVPAYDIGESVDVLVDPDHPNRPALIDDFAQRWFPVAVPALLALASLAIGSLLYVN
CCHHCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE
ERRSRQADAFSAPADRKTIRRRWNIAIVLIPIAIGTGFLAGAGAVGLRQWQIDRHYARST
CHHCCCCCCCCCCCHHHHHHHHCCEEEEEEEEHHCCCHHHCCCCCCHHHHHHHHHHHHCC
GHVVEIAETAHSPPARTSLYSVSIAFKTDSGRQVTFAQGSASSNPGLYEGEIVDVLYDPV
CCEEEEHHHCCCCCCCCEEEEEEEEEECCCCCEEEEECCCCCCCCCCCCCEEEEEEECCC
TPERALVDRFWDRWALTAILFAIGAPFLVAGLFIAGTLWPDHRPHEIPE
CCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
GRRTWNHVSETRPFRGHGHADIGAHVESHPPPDRIRMHHTTHEAKPVMLRKDALVAFAL
CCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCHHHEEEECCCCCCCCEEEEHHHHHHHHH
GIALLVAAAALAVTAGGAAGHLVRAPGTVVRIVQDSDAMRAYRPIVAYLANDGRRREVAG
HHHHHHHHHHHHHHCCCCCCCEEECCCEEEEEEECCCHHHHHHHHHHHHHCCCCEEECCC
NTASMVPAYDIGESVDVLVDPDHPNRPALIDDFAQRWFPVAVPALLALASLAIGSLLYVN
CCHHCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE
ERRSRQADAFSAPADRKTIRRRWNIAIVLIPIAIGTGFLAGAGAVGLRQWQIDRHYARST
CHHCCCCCCCCCCCHHHHHHHHCCEEEEEEEEHHCCCHHHCCCCCCHHHHHHHHHHHHCC
GHVVEIAETAHSPPARTSLYSVSIAFKTDSGRQVTFAQGSASSNPGLYEGEIVDVLYDPV
CCEEEEHHHCCCCCCCCEEEEEEEEEECCCCCEEEEECCCCCCCCCCCCCEEEEEEECCC
TPERALVDRFWDRWALTAILFAIGAPFLVAGLFIAGTLWPDHRPHEIPE
CCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA