| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is 115353173
Identifier: 115353173
GI number: 115353173
Start: 3442070
End: 3442255
Strand: Direct
Name: 115353173
Synonym: Bamb_3122
Alternate gene names: NA
Gene position: 3442070-3442255 (Clockwise)
Preceding gene: 115353172
Following gene: 115353174
Centisome position: 96.78
GC content: 70.43
Gene sequence:
>186_bases TTGACGCTCATCCGCGTTCAAGCGCATTTCGACACGATGCATCCGTTCACGTCCGCACTCGCTCAATCCCGGCCGCAGTT CGACTCGCGGCCGCAGGCGTGCGCGCATCCGTCGGTCCTTCCTCCTCCTGTCGCACCGCCGCTCGTCGGCGCCGCGCCGC CCTCGCCGGCGGCACGCGTCGGCTGA
Upstream 100 bases:
>100_bases TGGCCACGCCTGCGCGAACGCGGCGGCATCACATGACGTTCCCGCACGCAACCGACTCTTTGCGCAGACAGTTGCGCCGG ATGGCCGCCTTGCGGTACCG
Downstream 100 bases:
>100_bases CCAGCCGGCTTTCAATTTTCGTTTTCCATTCGCCCGTTTGCAGCCGTTCGTGCGTCGTCACGCACAGCGCGTTGCCGCGC GCGCGACATGGAACGTATCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 61; Mature: 60
Protein sequence:
>61_residues MTLIRVQAHFDTMHPFTSALAQSRPQFDSRPQACAHPSVLPPPVAPPLVGAAPPSPAARVG
Sequences:
>Translated_61_residues MTLIRVQAHFDTMHPFTSALAQSRPQFDSRPQACAHPSVLPPPVAPPLVGAAPPSPAARVG >Mature_60_residues TLIRVQAHFDTMHPFTSALAQSRPQFDSRPQACAHPSVLPPPVAPPLVGAAPPSPAARVG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6394; Mature: 6263
Theoretical pI: Translated: 10.38; Mature: 10.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLIRVQAHFDTMHPFTSALAQSRPQFDSRPQACAHPSVLPPPVAPPLVGAAPPSPAARV CCEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC G C >Mature Secondary Structure TLIRVQAHFDTMHPFTSALAQSRPQFDSRPQACAHPSVLPPPVAPPLVGAAPPSPAARV CEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC G C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA