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The map label for this gene is ybeQ [C]

Identifier: 115353003

GI number: 115353003

Start: 3255854

End: 3256711

Strand: Direct

Name: ybeQ [C]

Synonym: Bamb_2952

Alternate gene names: 115353003

Gene position: 3255854-3256711 (Clockwise)

Preceding gene: 115353002

Following gene: 115353004

Centisome position: 91.55

GC content: 74.48

Gene sequence:

>858_bases
ATGACCATGAGACCCGCGATGCAACCGATCCGGACGATGCGGCCGGCCGAGGCCGGCTTCACCGCCGCCGCGCGGCGCCT
GCTGCGCGCGAAACTCCCGCCGGCCGCGTTGCTCGCGGCGGCGGCCGTGACCGTCGCGGCCGTCGTCGCGACGACCGGCT
GGCGGGCCGCCGGCCCCGCGCCGAGCGCCGCTCAGCTCGACGAATGGCAGGCGATGGTCGCGCAGGCCGTCGAGCCGCAT
GCGCTCGCGCAGTTGCGCACCCTCGCACGGCGCGGTTCGGGCGATGCGCAGGCGGCGCTCGGGATCGCGCTCGTCGATGC
GCGCGAGCCGGGGCTGCGCGACGAGGGGCGCGGATGGCTGGAAACTGCCGCGGACGGCAAGGCCGACTCATCCGCCGCGC
GACGCGCGCAGCTCGCACTCGGCAAGGCGCTGCTGCTCGGCAGCGGCGACATCCCGAAGGACTACGCGCGCGCCCGCGCG
CTGCTCGGCGAAGCGGCCGGCCAGGGCGACCCGGCCGCCGCGTACTACCTCGGGCTGATCTATCGCAGCGGCTACGGCAC
CGCGGCCGACCCCGTGCAGGCCGCGCACTGGTTCGAGCTCGCGTCGCGCGCCGACATCCCCGCCGCGGATTTCATGCTCG
CAAACGCGTACCGCGACGGCAGCGGCGTGCCGCGCGACGAGGCGCGGGCGCTTGCGCTGTATCGGCGTGCGGCGGAACAC
GAGCTGCCGGAAGCCGTGCAGACGCTCGCGATGGCGTATCGCAACGGTGAGCTTGGGCTCAAGCCCGATGCGGATGAGTT
CCACGCGCAGTGGATCGAGACCGCGCACGCGTTGAAGCATCCGGTTGTGGCGCCGTGA

Upstream 100 bases:

>100_bases
TCGGCGACGCGGCGGCAGCCGGCCTGAGCGGCCTCACGCAGGTCGCGGCCGACGACGGCTCGGGCAAGAACCTCGCCATC
TACGAGATCGACCTCACGCA

Downstream 100 bases:

>100_bases
CGGTGCGGCAATGCGCGGCGGGCCGCCAGTCCGCCGCGGACCGACGCACGTGACATCCCGCGATCGAACCAGGGATGCCA
CGTCTGATACGGGGGGACGG

Product: Sel1 domain-containing protein

Products: NA

Alternate protein names: Tetratricopeptide Repeat-Like Protein; Sel1 Domain Protein Repeat-Containing Protein; TPR Repeat SEL1 Subfamily

Number of amino acids: Translated: 285; Mature: 284

Protein sequence:

>285_residues
MTMRPAMQPIRTMRPAEAGFTAAARRLLRAKLPPAALLAAAAVTVAAVVATTGWRAAGPAPSAAQLDEWQAMVAQAVEPH
ALAQLRTLARRGSGDAQAALGIALVDAREPGLRDEGRGWLETAADGKADSSAARRAQLALGKALLLGSGDIPKDYARARA
LLGEAAGQGDPAAAYYLGLIYRSGYGTAADPVQAAHWFELASRADIPAADFMLANAYRDGSGVPRDEARALALYRRAAEH
ELPEAVQTLAMAYRNGELGLKPDADEFHAQWIETAHALKHPVVAP

Sequences:

>Translated_285_residues
MTMRPAMQPIRTMRPAEAGFTAAARRLLRAKLPPAALLAAAAVTVAAVVATTGWRAAGPAPSAAQLDEWQAMVAQAVEPH
ALAQLRTLARRGSGDAQAALGIALVDAREPGLRDEGRGWLETAADGKADSSAARRAQLALGKALLLGSGDIPKDYARARA
LLGEAAGQGDPAAAYYLGLIYRSGYGTAADPVQAAHWFELASRADIPAADFMLANAYRDGSGVPRDEARALALYRRAAEH
ELPEAVQTLAMAYRNGELGLKPDADEFHAQWIETAHALKHPVVAP
>Mature_284_residues
TMRPAMQPIRTMRPAEAGFTAAARRLLRAKLPPAALLAAAAVTVAAVVATTGWRAAGPAPSAAQLDEWQAMVAQAVEPHA
LAQLRTLARRGSGDAQAALGIALVDAREPGLRDEGRGWLETAADGKADSSAARRAQLALGKALLLGSGDIPKDYARARAL
LGEAAGQGDPAAAYYLGLIYRSGYGTAADPVQAAHWFELASRADIPAADFMLANAYRDGSGVPRDEARALALYRRAAEHE
LPEAVQTLAMAYRNGELGLKPDADEFHAQWIETAHALKHPVVAP

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29966; Mature: 29835

Theoretical pI: Translated: 7.91; Mature: 7.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMRPAMQPIRTMRPAEAGFTAAARRLLRAKLPPAALLAAAAVTVAAVVATTGWRAAGPA
CCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
PSAAQLDEWQAMVAQAVEPHALAQLRTLARRGSGDAQAALGIALVDAREPGLRDEGRGWL
CCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHEEEEECCCCCCCCCCCCHH
ETAADGKADSSAARRAQLALGKALLLGSGDIPKDYARARALLGEAAGQGDPAAAYYLGLI
HHCCCCCCCHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHH
YRSGYGTAADPVQAAHWFELASRADIPAADFMLANAYRDGSGVPRDEARALALYRRAAEH
HHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
ELPEAVQTLAMAYRNGELGLKPDADEFHAQWIETAHALKHPVVAP
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TMRPAMQPIRTMRPAEAGFTAAARRLLRAKLPPAALLAAAAVTVAAVVATTGWRAAGPA
CCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
PSAAQLDEWQAMVAQAVEPHALAQLRTLARRGSGDAQAALGIALVDAREPGLRDEGRGWL
CCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHEEEEECCCCCCCCCCCCHH
ETAADGKADSSAARRAQLALGKALLLGSGDIPKDYARARALLGEAAGQGDPAAAYYLGLI
HHCCCCCCCHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHH
YRSGYGTAADPVQAAHWFELASRADIPAADFMLANAYRDGSGVPRDEARALALYRRAAEH
HHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
ELPEAVQTLAMAYRNGELGLKPDADEFHAQWIETAHALKHPVVAP
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA