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The map label for this gene is yifB [H]

Identifier: 115352974

GI number: 115352974

Start: 3221363

End: 3222973

Strand: Direct

Name: yifB [H]

Synonym: Bamb_2923

Alternate gene names: 115352974

Gene position: 3221363-3222973 (Clockwise)

Preceding gene: 115352973

Following gene: 115352976

Centisome position: 90.58

GC content: 75.17

Gene sequence:

>1611_bases
ATGTCGCTCGCCGTGGTGCGCAGTCGCGCGCCGGCGGCCGGCCGCGCGCCGGACGTCACCGTCGAAGTCCATCTTGCCAA
CGGGTTGCCGTCGTTCTCGATCGTCGGCCTGCCCGATCTCGAAGTCCGCGAAAGCCGCGAGCGCGTGCGCGCCGCGCTGC
AGAACTGCGGATTCGAATTCCCCGTGCGCCGCATCACGGTCAACCTCGCACCGGCCGACCTGCCGAAGGAGTCCGGCCGC
TTCGACCTGCCGATCGCGCTCGGCATCCTCGCCGCGAACGGCCAGATCCCGGCCGACGCGCTGGCCGGCCGCGAATTCGC
GGGCGAGCTGTCGCTGACCGGCGCGCTGCGGCCGATGCGCGGCGCGTTCGCGATGGCGTGCGGCGCGGCACGCGACTGGC
GCGCGGGTGAAACCGGATCAAGCGTCGGTTCCGGCGCCCGGCCCGACGCGATGTCCGACCCAGCGGCCGGCCCGCCGGCC
GCGTCGCGCCCGCCCGAGCTGTACCTGCCGCTCGACAGCGCCGCCGAGGCCGCGCTGGTGCCGGGCGTCACGGTGTTCGG
CGCGCCCGACCTGCCCGCGCTGTGCGCGCACCTCGCCGGTGCGCCGGACGCGCGGCTCGCGCCGGTCGCGGCGCCCTGCC
TCGACGGCGAGCCGGCGCCGGCCGCCCCCGATCTCGCGGACGTCATCGGCCAGCGCGGCGCCCGGCGCGCGCTCGAAGTG
GCCGCCGCGGGCGGACACCACATGCTGATGATCGGGCCGCCCGGCGCCGGCAAGTCGATGCTGGCCGCGCGGCTGCCGGG
CCTCCTGCCGCCGCTGACCGACGACGAGGCGCTGACGTCGGCCGCGCTCCTTTCCGCGAGCCGCCTCGGCTTCTCGCCCG
CGCAGTGGCGGCGGCGGCCGTTCCGCTCGCCGCATCATTCGTCGAGCGCCGCTGCATTGGTTGGCGGCCGCAACCCACCG
CAGCCGGGCGAGATCACGCTCGCGCACCTCGGCGTGCTGTTTCTCGACGAGTTGCCCGAATTCGACCGGCACGTGCTGGA
AATGCTGCGCGAGCCGCTGGAAGTCGGCCGCATCACGATCTCGCGCGCGGCGCAGCAGGCCGATTTCCCCGCCGCGTGCC
AGTTGATCGCCGCGATGAATCCGTGCCCGTGCGGCTGGCACGGCGATCCGTCCGGGCGCTGCCGCTGCTCGCCGGACGTC
GCCTCACGCTACCTGCGCAAGCTGTCGGGGCCGCTGCTCGACCGGATCGACATCCAGATCGACCTGCCCGCGCTGTCGCC
GGCCGAACTCGCCGCGCGCGCGACCGCGCACGGCGAATCGAGCGCCACGGTCGCTGCGCGGGTCGCCCAGGCGCGTGCGC
TGCAGTTCGAGCGGCAGGGCAAGACGAATCACATGCTGAGCGGCCGCGAGACCGACGACCTGTGCCGCCCGACCGACGAC
GGCGAGCGGCTGCTGCGCGAGGCGGGGGAGCGCTTCGGCTGGTCGGCGCGCGCGTATTTCCGCGTGCTGAAGGTCGCGCG
GACGATCGCCGACCTGGCCGGCGACCCGTTGCCGACGGCCGCGCAGATCGCCGAGGCGATCCGCTACCGGCGCGCGCTCA
CGGCGCTGTGA

Upstream 100 bases:

>100_bases
CTCGCGCCACGCCGGCAAGCGCGCACCGATTCCTCCGATTCCCGCGGCATGCGGCCCTGAACGGCCGTTGCCCGTCCGTT
TCATTTACAGGAGCCTCGCC

Downstream 100 bases:

>100_bases
GCGCCCTCGGGGGACAAAATCCGGCTGTCAAGACTTGACTTATGCACAATTTAGCGAATCTGGCCCCGGATCGCCGCTCG
CGAGCGCCTTGCTATCGCGA

Product: Mg chelatase subunit ChlI

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 536; Mature: 535

Protein sequence:

>536_residues
MSLAVVRSRAPAAGRAPDVTVEVHLANGLPSFSIVGLPDLEVRESRERVRAALQNCGFEFPVRRITVNLAPADLPKESGR
FDLPIALGILAANGQIPADALAGREFAGELSLTGALRPMRGAFAMACGAARDWRAGETGSSVGSGARPDAMSDPAAGPPA
ASRPPELYLPLDSAAEAALVPGVTVFGAPDLPALCAHLAGAPDARLAPVAAPCLDGEPAPAAPDLADVIGQRGARRALEV
AAAGGHHMLMIGPPGAGKSMLAARLPGLLPPLTDDEALTSAALLSASRLGFSPAQWRRRPFRSPHHSSSAAALVGGRNPP
QPGEITLAHLGVLFLDELPEFDRHVLEMLREPLEVGRITISRAAQQADFPAACQLIAAMNPCPCGWHGDPSGRCRCSPDV
ASRYLRKLSGPLLDRIDIQIDLPALSPAELAARATAHGESSATVAARVAQARALQFERQGKTNHMLSGRETDDLCRPTDD
GERLLREAGERFGWSARAYFRVLKVARTIADLAGDPLPTAAQIAEAIRYRRALTAL

Sequences:

>Translated_536_residues
MSLAVVRSRAPAAGRAPDVTVEVHLANGLPSFSIVGLPDLEVRESRERVRAALQNCGFEFPVRRITVNLAPADLPKESGR
FDLPIALGILAANGQIPADALAGREFAGELSLTGALRPMRGAFAMACGAARDWRAGETGSSVGSGARPDAMSDPAAGPPA
ASRPPELYLPLDSAAEAALVPGVTVFGAPDLPALCAHLAGAPDARLAPVAAPCLDGEPAPAAPDLADVIGQRGARRALEV
AAAGGHHMLMIGPPGAGKSMLAARLPGLLPPLTDDEALTSAALLSASRLGFSPAQWRRRPFRSPHHSSSAAALVGGRNPP
QPGEITLAHLGVLFLDELPEFDRHVLEMLREPLEVGRITISRAAQQADFPAACQLIAAMNPCPCGWHGDPSGRCRCSPDV
ASRYLRKLSGPLLDRIDIQIDLPALSPAELAARATAHGESSATVAARVAQARALQFERQGKTNHMLSGRETDDLCRPTDD
GERLLREAGERFGWSARAYFRVLKVARTIADLAGDPLPTAAQIAEAIRYRRALTAL
>Mature_535_residues
SLAVVRSRAPAAGRAPDVTVEVHLANGLPSFSIVGLPDLEVRESRERVRAALQNCGFEFPVRRITVNLAPADLPKESGRF
DLPIALGILAANGQIPADALAGREFAGELSLTGALRPMRGAFAMACGAARDWRAGETGSSVGSGARPDAMSDPAAGPPAA
SRPPELYLPLDSAAEAALVPGVTVFGAPDLPALCAHLAGAPDARLAPVAAPCLDGEPAPAAPDLADVIGQRGARRALEVA
AAGGHHMLMIGPPGAGKSMLAARLPGLLPPLTDDEALTSAALLSASRLGFSPAQWRRRPFRSPHHSSSAAALVGGRNPPQ
PGEITLAHLGVLFLDELPEFDRHVLEMLREPLEVGRITISRAAQQADFPAACQLIAAMNPCPCGWHGDPSGRCRCSPDVA
SRYLRKLSGPLLDRIDIQIDLPALSPAELAARATAHGESSATVAARVAQARALQFERQGKTNHMLSGRETDDLCRPTDDG
ERLLREAGERFGWSARAYFRVLKVARTIADLAGDPLPTAAQIAEAIRYRRALTAL

Specific function: Unknown

COG id: COG0606

COG function: function code O; Predicted ATPase with chaperone activity

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Mg-chelatase subunits D/I family. ComM subfamily [H]

Homologues:

Organism=Escherichia coli, GI145693202, Length=532, Percent_Identity=45.3007518796992, Blast_Score=430, Evalue=1e-121,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR004482
- InterPro:   IPR000523
- InterPro:   IPR020568
- InterPro:   IPR002078 [H]

Pfam domain/function: PF01078 Mg_chelatase [H]

EC number: NA

Molecular weight: Translated: 56210; Mature: 56079

Theoretical pI: Translated: 7.27; Mature: 7.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLAVVRSRAPAAGRAPDVTVEVHLANGLPSFSIVGLPDLEVRESRERVRAALQNCGFEF
CCCEEEECCCCCCCCCCCEEEEEEECCCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCC
PVRRITVNLAPADLPKESGRFDLPIALGILAANGQIPADALAGREFAGELSLTGALRPMR
CEEEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHCCHHCCCEEEHHCCCHHH
GAFAMACGAARDWRAGETGSSVGSGARPDAMSDPAAGPPAASRPPELYLPLDSAAEAALV
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHC
PGVTVFGAPDLPALCAHLAGAPDARLAPVAAPCLDGEPAPAAPDLADVIGQRGARRALEV
CCEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHH
AAAGGHHMLMIGPPGAGKSMLAARLPGLLPPLTDDEALTSAALLSASRLGFSPAQWRRRP
HCCCCCEEEEEECCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHCC
FRSPHHSSSAAALVGGRNPPQPGEITLAHLGVLFLDELPEFDRHVLEMLREPLEVGRITI
CCCCCCCCCCEEEECCCCCCCCCCEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
SRAAQQADFPAACQLIAAMNPCPCGWHGDPSGRCRCSPDVASRYLRKLSGPLLDRIDIQI
HHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCEEECHHHHHHHHHHHCCCHHEEEEEEE
DLPALSPAELAARATAHGESSATVAARVAQARALQFERQGKTNHMLSGRETDDLCRPTDD
ECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCH
GERLLREAGERFGWSARAYFRVLKVARTIADLAGDPLPTAAQIAEAIRYRRALTAL
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SLAVVRSRAPAAGRAPDVTVEVHLANGLPSFSIVGLPDLEVRESRERVRAALQNCGFEF
CCEEEECCCCCCCCCCCEEEEEEECCCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCC
PVRRITVNLAPADLPKESGRFDLPIALGILAANGQIPADALAGREFAGELSLTGALRPMR
CEEEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHCCHHCCCEEEHHCCCHHH
GAFAMACGAARDWRAGETGSSVGSGARPDAMSDPAAGPPAASRPPELYLPLDSAAEAALV
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHC
PGVTVFGAPDLPALCAHLAGAPDARLAPVAAPCLDGEPAPAAPDLADVIGQRGARRALEV
CCEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHH
AAAGGHHMLMIGPPGAGKSMLAARLPGLLPPLTDDEALTSAALLSASRLGFSPAQWRRRP
HCCCCCEEEEEECCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHCC
FRSPHHSSSAAALVGGRNPPQPGEITLAHLGVLFLDELPEFDRHVLEMLREPLEVGRITI
CCCCCCCCCCEEEECCCCCCCCCCEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
SRAAQQADFPAACQLIAAMNPCPCGWHGDPSGRCRCSPDVASRYLRKLSGPLLDRIDIQI
HHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCEEECHHHHHHHHHHHCCCHHEEEEEEE
DLPALSPAELAARATAHGESSATVAARVAQARALQFERQGKTNHMLSGRETDDLCRPTDD
ECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCH
GERLLREAGERFGWSARAYFRVLKVARTIADLAGDPLPTAAQIAEAIRYRRALTAL
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11677609 [H]