Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115352907

Identifier: 115352907

GI number: 115352907

Start: 3150136

End: 3150771

Strand: Direct

Name: 115352907

Synonym: Bamb_2856

Alternate gene names: NA

Gene position: 3150136-3150771 (Clockwise)

Preceding gene: 115352906

Following gene: 115352910

Centisome position: 88.57

GC content: 66.19

Gene sequence:

>636_bases
ATGTCCACCCTATCGACCACCCTGATCGACCTGCCGCTGTTTCCGCTGCACACGGTGCTGTTTCCCGGTGGCTGGCTGCC
GCTCAAGGTGTTCGAAGCGCGCTATCTCGACATGTCGCGCGCATGCCTGCGCGACGACGCACCGTTCGGCGTGTGCCTGC
TGAAGAGCGGCCCCGAAGTCGCGCAGGACGGCGCCGTGTCGGTGCCCGAAACCATCGGCTGCATGGCGCGCATCACCGAG
TGCGATACCGGCGAATTCGGGATGCTGTACCTGGAGGCGATCGGCACGCAGCGTTTCGAGCTGCTGTCGTATCGCGTAGA
AGGCAACGGGCTGCTGGTCGGGATCGCCGAGCCGCTGCCCGACGACATCCCACTCGAAGGCGAGCAGGCGCTCGCGCAAT
TCGGCTCGTGCGCCGAGGTGCTCGAGCGCATCATCGAAGCGCTGAAGAAATCCGAACCGGGCAAGCTGCCGTTCGCCGAA
CCGTTCCGCCTCGACGATCCGAGCTGGGTGTCGAACCGCCTCGCGGAACTGTTGCCGCTCGACCTGCGCGCGCGGCAGAA
GCTGATGGAGTTTCCGGATGTCGGCGCGCGGATCGATGCCGTGCACCACGTGCTCGACCGGCACGGATGGCTGTAG

Upstream 100 bases:

>100_bases
TCGTGCGGCATCGTGACGCGCCAGTGGATGTCGACGCGTCGTCGCGGCTCGTCACCGAGGTCGACCGACCTTAGCGACAC
CGCCCTCTCCCCGGCGCGCC

Downstream 100 bases:

>100_bases
GCATCGCGGCCACCCGGTCGCGTCTGAGCGTCTGAGCGTCTGAGCGTTGCAGCGGTGCCGCCGCCGCCCGTCGCCGAACG
GATGGATGCCCTGCGGCGAC

Product: peptidase S16, lon domain-containing protein

Products: NA

Alternate protein names: ATP-Dependent Protease La; Peptidase S; Endopeptidase; ATP-Dependent Protease La Domain Protein; ATP-Dependent Protease; ATP-Dependent Proteinase; ATP-Dependent Protease La Domain-Containing Protein; Protease; ATP-Dependent Endopeptidase Lon

Number of amino acids: Translated: 211; Mature: 210

Protein sequence:

>211_residues
MSTLSTTLIDLPLFPLHTVLFPGGWLPLKVFEARYLDMSRACLRDDAPFGVCLLKSGPEVAQDGAVSVPETIGCMARITE
CDTGEFGMLYLEAIGTQRFELLSYRVEGNGLLVGIAEPLPDDIPLEGEQALAQFGSCAEVLERIIEALKKSEPGKLPFAE
PFRLDDPSWVSNRLAELLPLDLRARQKLMEFPDVGARIDAVHHVLDRHGWL

Sequences:

>Translated_211_residues
MSTLSTTLIDLPLFPLHTVLFPGGWLPLKVFEARYLDMSRACLRDDAPFGVCLLKSGPEVAQDGAVSVPETIGCMARITE
CDTGEFGMLYLEAIGTQRFELLSYRVEGNGLLVGIAEPLPDDIPLEGEQALAQFGSCAEVLERIIEALKKSEPGKLPFAE
PFRLDDPSWVSNRLAELLPLDLRARQKLMEFPDVGARIDAVHHVLDRHGWL
>Mature_210_residues
STLSTTLIDLPLFPLHTVLFPGGWLPLKVFEARYLDMSRACLRDDAPFGVCLLKSGPEVAQDGAVSVPETIGCMARITEC
DTGEFGMLYLEAIGTQRFELLSYRVEGNGLLVGIAEPLPDDIPLEGEQALAQFGSCAEVLERIIEALKKSEPGKLPFAEP
FRLDDPSWVSNRLAELLPLDLRARQKLMEFPDVGARIDAVHHVLDRHGWL

Specific function: Unknown

COG id: COG2802

COG function: function code R; Uncharacterized protein, similar to the N-terminal domain of Lon protease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23315; Mature: 23184

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTLSTTLIDLPLFPLHTVLFPGGWLPLKVFEARYLDMSRACLRDDAPFGVCLLKSGPEV
CCCHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCH
AQDGAVSVPETIGCMARITECDTGEFGMLYLEAIGTQRFELLSYRVEGNGLLVGIAEPLP
HCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHEEHEEEEECCCEEEEECCCCCC
DDIPLEGEQALAQFGSCAEVLERIIEALKKSEPGKLPFAEPFRLDDPSWVSNRLAELLPL
CCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC
DLRARQKLMEFPDVGARIDAVHHVLDRHGWL
CHHHHHHHHHCCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
STLSTTLIDLPLFPLHTVLFPGGWLPLKVFEARYLDMSRACLRDDAPFGVCLLKSGPEV
CCHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCH
AQDGAVSVPETIGCMARITECDTGEFGMLYLEAIGTQRFELLSYRVEGNGLLVGIAEPLP
HCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHEEHEEEEECCCEEEEECCCCCC
DDIPLEGEQALAQFGSCAEVLERIIEALKKSEPGKLPFAEPFRLDDPSWVSNRLAELLPL
CCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC
DLRARQKLMEFPDVGARIDAVHHVLDRHGWL
CHHHHHHHHHCCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA